For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. gilvum PYR-GCK Mflv_1366 (-)

annotation: transcription factor WhiB
coordinates: 1423188 - 1423544
length: 118

VSSIKPAARPTTVTAPTPPVVQGKEAEARIAWVSQARCRQTDPDELFVRGAAQRKAAVICRHCPVIAECG
ADALDNRVEFGVWGGMTERQRRALLKQHPEVVSWADFFAAQRKHRTAG
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_1366--100% (118)transcription factor WhiB
M. gilvum PYR-GCKMflv_4729-1e-1045.31% (64) transcription factor WhiB
M. gilvum PYR-GCKMflv_4685-2e-1041.10% (73) transcription factor WhiB

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3706cwhiB42e-4575.00% (116) putative transcriptional regulatory protein whiB-like whiB4
M. tuberculosis H37RvRv3681cwhiB42e-4575.00% (116) transcriptional regulatory protein WHIB-like WHIB4
M. leprae Br4923MLBr_02307-9e-3889.74% (78) hypothetical protein MLBr_02307
M. abscessus ATCC 19977MAB_0409-4e-4778.38% (111) putative transcriptional regulator WhiB
M. marinum MMMAR_5170whiB42e-4371.19% (118) transcriptional regulatory protein Whib-like WhiB4
M. avium 104MAV_0447-7e-3388.73% (71) transcription factor WhiB
M. smegmatis MC2 155MSMEG_6199-3e-5179.49% (117) transcription factor WhiB
M. thermoresistible (build 8)TH_2123whiB42e-4495.29% (85) PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB4
M. ulcerans Agy99MUL_4256whiB42e-2681.97% (61) transcriptional regulatory protein Whib-like WhiB4
M. vanbaalenii PYR-1Mvan_5441-4e-5990.68% (118) transcription factor WhiB

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_1366|M.gilvum_PYR-GCK          MSSIKPAARPTTVTAPTPPVVQGKEAEARIAWVSQARCRQTDPDELFVRG
Mvan_5441|M.vanbaalenii_PYR-1       MSSIKPAARKTTVDPSDQSILHGAEAEARIAWVSQARCRQTDPDELFVRG
MSMEG_6199|M.smegmatis_MC2_155      MSATHTVARKASTLSTTTNTAQHRDSEARIAWVSQARCRQADPDELFVRG
TH_2123|M.thermoresistible__bu      --------------------------------VSRARCRQTDPDELFVRG
MAB_0409|M.abscessus_ATCC_1997      MSASR---PAMSALHTAVSID---GGEARIAWVSQARCRQGDPDELFVRG
MAV_0447|M.avium_104                -----------------------------------------------MRG
Mb3706c|M.bovis_AF2122/97           MSGTRPAARRTN-LTAAQNVVRSVDAEERIAWVSKALCRTTDPDELFVRG
Rv3681c|M.tuberculosis_H37Rv        MSGTRPAARRTN-LTAAQNVVRSVDAEERIAWVSKALCRTTDPDELFVRG
MMAR_5170|M.marinum_M               MSGIRPVDGRAN-LTSAQNLLSTGEAEERINWVSKALCRATDPDELFVRG
MUL_4256|M.ulcerans_Agy99           --------------------------------------------------
MLBr_02307|M.leprae_Br4923          ------------------------------------MCRATDPDELFVRG
                                                                                      

Mflv_1366|M.gilvum_PYR-GCK          AAQRKAAVICRHCPVIAECGADALDNRVEFGVWGGMTERQRRALLKQHPE
Mvan_5441|M.vanbaalenii_PYR-1       AAQRKAAVICRHCPVIAECGADALDNRVEFGVWGGMTERQRRALLKQHPE
MSMEG_6199|M.smegmatis_MC2_155      AAQRKAAVICRHCPVILECGADALDNRVEFGVWGGMTERQRRALLKQHPE
TH_2123|M.thermoresistible__bu      AAQRKAAVICRHCPVILECGADALDNRVEFGVWGGMTERQRRALLKQHPE
MAB_0409|M.abscessus_ATCC_1997      AAQRKAAVICRHCPVMMECGADALDNRVEFGVWGGLTERQRRAMLKAHPE
MAV_0447|M.avium_104                AAQRKAAVICRHCPVMQECGADALDNRVEFGVWGGMTERQRRALLKQHPE
Mb3706c|M.bovis_AF2122/97           AAQRKAAVICRHCPVMQECAADALDNKVEFGVWGGMTERQRRALLKQHPE
Rv3681c|M.tuberculosis_H37Rv        AAQRKAAVICRHCPVMQECAADALDNKVEFGVWGGMTERQRRALLKQHPE
MMAR_5170|M.marinum_M               AAQRKAAVICRHCPVMQECGADALDNKVEFGVWGGMTERQRRALLKQHPE
MUL_4256|M.ulcerans_Agy99           -------MICRHCPVMQECGADALDNKVEFGVWGGMTERQRRALLKQHPE
MLBr_02307|M.leprae_Br4923          AAQRKAAVICRHCPVMQECRADALDNKVEFGVWGGMTERQRRALLKQHPE
                                           :*******: ** ******:********:*******:** ***

Mflv_1366|M.gilvum_PYR-GCK          VVSWADFFAAQRKHRT--AG
Mvan_5441|M.vanbaalenii_PYR-1       VVSWADFFAAQRKHRT--AG
MSMEG_6199|M.smegmatis_MC2_155      VSSWADFFAAQRKHRS--AV
TH_2123|M.thermoresistible__bu      VVSWADFFAAQRKQRN--AV
MAB_0409|M.abscessus_ATCC_1997      VESWADFFAAQRKHKS--AV
MAV_0447|M.avium_104                VVSWADFFDK-RRNRS--AG
Mb3706c|M.bovis_AF2122/97           VVSWSDYLEK-RKRRTGTAG
Rv3681c|M.tuberculosis_H37Rv        VVSWSDYLEK-RKRRTGTAG
MMAR_5170|M.marinum_M               VVSWSDYFEK-RKRRS--VG
MUL_4256|M.ulcerans_Agy99           VVSWSDYFEK-RKRRS--VG
MLBr_02307|M.leprae_Br4923          VVSWADFFDT-RKHRN--VS
                                    * **:*::   *:.:.  .