For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VQLERFASSPIGNLWPIAGTDGRNGRFYEHSAYVAHPLGVEPQLDGATWRAVTRASRALAHLDQASRQVP NPRILRRPTLSREAQSTSALEGTFAPIDDVLAADSAADEDKSAALMEVLNYVDAADVAFDYVAEHRTITT SLLFDAHQQLVSGTDSETRDAGRVRRCQVAIGSPDGTIESARFVPMPPGPELEAAVRDLVGWITTAGDRD PLIAAAMTHYQFETLHPFNDGNGRIGRLLIVLQFMIDDLLQEPLLSVSPWFESRRNEYEDELAKVSQTGE WDSWIRFFSRGVEASAIDTARRINLMLNAQRSYVQILQDSGYRGGVARDIVESLVDTPIVRVPALARRFN KTPQGIDTAVKKLAALGIVDGPFGSYGRYYVAREVYRAITAAAP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0293 | - | - | 100% (394) | filamentation induced by cAMP protein Fic |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_0586 | - | 1e-15 | 27.65% (293) | hypothetical protein MMAR_0586 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_2140 | - | 3e-11 | 26.81% (317) | Fic protein family protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_2529 | - | 2e-08 | 30.43% (161) | filamentation induced by cAMP protein Fic |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_2140|M.smegmatis_MC2_155 MASAEEGTALTYETLTWDAPAEAGYGLADLRAAQRQAGEYEAAIPASIAE Mvan_2529|M.vanbaalenii_PYR-1 MASVSSGTAIGYESLTWDAPVEAGYGLADLRAAQRQAGKYEAAVPASIAD MMAR_0586|M.marinum_M MRPSDAWPRHSAERRPWAQTQRGGT------RADRTLRSVTVSLPPYIAK Mflv_0293|M.gilvum_PYR-GCK --MQLERFASSPIGNLWPIAGTDGR--------NGRFYEHSAYVAHPLG- * . * : . . :. :. MSMEG_2140|M.smegmatis_MC2_155 LAVSLPAAVLADAEEASNEITRFDAELGDEVAP--FAAVLLRSESTASSN Mvan_2529|M.vanbaalenii_PYR-1 LTVALPAGVLADAEEASNEITRFDAELGDEIAP--FSAVLLRSESAASSN MMAR_0586|M.marinum_M VDANIDADIAVKLEDAMSEISRLDSTHGTHLAG--LSTLLLRTESVASSK Mflv_0293|M.gilvum_PYR-GCK VEPQLDGATWRAVTRASRALAHLDQASRQVPNPRILRRPTLSREAQSTSA : : . * ::::* : * *: ::* MSMEG_2140|M.smegmatis_MC2_155 IENLTASARAIAEAEALG--DTSRRNAALI--VSNTEAMKAAVALADRLD Mvan_2529|M.vanbaalenii_PYR-1 IENLTASARAIAEAEALG--DTSRRNAALI--VSNTEAMKAAVALADRLD MMAR_0586|M.marinum_M IERVEASVDDYARALHGGRGNSSAVSMVAA--TTALKEMIASVNRDAPIQ Mflv_0293|M.gilvum_PYR-GCK LEGTFAPIDDVLAADSAADEDKSAALMEVLNYVDAADVAFDYVAEHRTIT :* *. * . :.* . . * : MSMEG_2140|M.smegmatis_MC2_155 DRAILAMHAALMHH--SDPVSAGNWRTEQVWIGGGNFGPRGADYIAPRHT Mvan_2529|M.vanbaalenii_PYR-1 ENAILAMHATLMRD--SNPASAGHWRTEQVWIGGGNFGPRGADYVAPHHA MMAR_0586|M.marinum_M MTAILRAHEALMREDPTEGQHAGQVRTVQNWIGGSDYSPRNALYVPPPPD Mflv_0293|M.gilvum_PYR-GCK TSLLFDAHQQLVSGTDSETRDAGRVRRCQVAIGSPDGTIESARFVPMPPG :: * *: :: **. * * **. : ..* ::. MSMEG_2140|M.smegmatis_MC2_155 -RVPGAIEDLLAFIRRA-DVPSLPQIAIAHAQFETIHPFTDGNGRTGRAL Mvan_2529|M.vanbaalenii_PYR-1 -RVLDSIEDMIAFTRRA-AMPTLPQIAIAHAQFETIHPFTDGNGRTGRAL MMAR_0586|M.marinum_M -TVHAYMDDLIEFANRT-DIPVLIQAAIAHAQFESIHPFTDGNGRIGRAL Mflv_0293|M.gilvum_PYR-GCK PELEAAVRDLVGWITTAGDRDPLIAAAMTHYQFETLHPFNDGNGRIGRLL : : *:: : : * *::* ***::***.***** ** * MSMEG_2140|M.smegmatis_MC2_155 IQAMLRHKRLTRQITVPVSAGLLTDTDAYFGALS-AYRDGDPAPMVERLS Mvan_2529|M.vanbaalenii_PYR-1 IQAMLRHKRLTRQITVPVSAGLLTDTDAYFGALG-SYRDGDPAPIVERLS MMAR_0586|M.marinum_M INTVLRRRGATTRLVVPLASALVAHRERYFGALN-TYRAGDLRPLIVTFA Mflv_0293|M.gilvum_PYR-GCK IVLQFMIDDLLQEPLLSVSPWFESRRNEYEDELAKVSQTGEWDSWIRFFS * : . :.::. : : : * . * : *: . : :: MSMEG_2140|M.smegmatis_MC2_155 EASLLAVANGRRLVTDLRSIRAEWDTRI--AARRDSAVHRVADLLIQHPV Mvan_2529|M.vanbaalenii_PYR-1 EASILAVANGRRLVADLRSLREEWNARI--IARRDSAVHRVADLLIKHPV MMAR_0586|M.marinum_M NSSRTAAAESRITAERLAEIPVEWRNMVG-PIRRHSATDKLLLLLPSTPI Mflv_0293|M.gilvum_PYR-GCK RGVEASAIDTARRINLMLNAQRSYVQILQDSGYRGGVARDIVESLVDTPI .. :. : : . .: : * ... : * . *: MSMEG_2140|M.smegmatis_MC2_155 FNAKLLQRELGITTGNARRYVDPLTAAGIIVEFTDRARNRAWSAPEVLSA Mvan_2529|M.vanbaalenii_PYR-1 FNARLLQRELGVRTGNARRYVDPLTDAGIIVEFTDRARNRAWRAPEVLSA MMAR_0586|M.marinum_M VSSDDVASLIDAPRSSVFAAIKRLHDTGVLRPLTNRKRDQVWGASLVLDE Mflv_0293|M.gilvum_PYR-GCK VRVPALARRFNKTPQGIDTAVKKLAALGIVDGPFG-SYGRYYVAREVYRA . : :. . :. * *:: . .: : * * MSMEG_2140|M.smegmatis_MC2_155 LDAFAARAGRRSRSG--- Mvan_2529|M.vanbaalenii_PYR-1 LDDFATRAGRRGRPD--- MMAR_0586|M.marinum_M LDDLGHRIERASAPSVRK Mflv_0293|M.gilvum_PYR-GCK ITAAAP------------ : .