For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MARRPDLKTGPERLAALVRTTVPPMHPAGLPFVGASLAVALAGRKSRWLRNAGVASAAANAAFFRHPPRT PPTRPGVVVAPADGLICLIEDELPPAELELPAVPLPRISIFLSLFDAHVQRAPLAGEVVAVEHRPGLFGS AELAAASADNERNSVVIRSPEGAEVIAVQIAGLLARRIVCNVKSGDKVGLGDTYGLIRYGSRLDTYLPAG SDVLVEVGQRAVAGETVLAELP
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_0153 | - | - | 100% (232) | phosphatidylserine decarboxylase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0445c | psd | 7e-88 | 67.39% (230) | phosphatidylserine decarboxylase |
| M. tuberculosis H37Rv | Rv0437c | psd | 7e-88 | 67.39% (230) | phosphatidylserine decarboxylase |
| M. leprae Br4923 | MLBr_00311 | - | 1e-80 | 61.98% (242) | phosphatidylserine decarboxylase |
| M. abscessus ATCC 19977 | MAB_0639c | - | 2e-78 | 61.18% (237) | phosphatidylserine decarboxylase |
| M. marinum M | MMAR_0754 | psd | 2e-86 | 66.67% (222) | phosphatidylserine decarboxylase Psd |
| M. avium 104 | MAV_4713 | psd | 2e-89 | 66.67% (240) | phosphatidylserine decarboxylase |
| M. smegmatis MC2 155 | MSMEG_0861 | psd | 1e-100 | 77.06% (231) | phosphatidylserine decarboxylase |
| M. thermoresistible (build 8) | TH_0813 | psd | 7e-81 | 69.71% (208) | POSSIBLE PHOSPHATIDYLSERINE DECARBOXYLASE PSD (PS |
| M. ulcerans Agy99 | MUL_1386 | psd | 3e-86 | 66.67% (222) | phosphatidylserine decarboxylase |
| M. vanbaalenii PYR-1 | Mvan_0751 | - | 1e-119 | 90.95% (232) | phosphatidylserine decarboxylase |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0153|M.gilvum_PYR-GCK MARRPDLKT--------GPERLAALVRTTVPPMHPAGLPFVGASLAVALA
Mvan_0751|M.vanbaalenii_PYR-1 MARRPDLKT--------GPARLAALVRTSVPPMHPAGLPFVGASLAVALA
MSMEG_0861|M.smegmatis_MC2_155 MARRPDLQS--------GPERLAALVRSSIPPMHSAGLPFVGASLAVALL
Mb0445c|M.bovis_AF2122/97 MARRPRPD---------GPQHLLALVRSAVPPVHPAGRPFIAAGLAIAAV
Rv0437c|M.tuberculosis_H37Rv MARRPRPD---------GPQHLLALVRSAVPPVHPAGRPFIAAGLAIAAV
MMAR_0754|M.marinum_M MARRPRRSDSSSAEPTLSPQHLLALVRSTIPPIHPAGRPFIAAGLAVAGV
MUL_1386|M.ulcerans_Agy99 MARRPRRSDSSSAEPTLSPQHLLALVRSTIPPIHPAGRPFIAAGLAVAGV
MAV_4713|M.avium_104 MARRPRTIGPSASDPGFSPQHALELVRSAIPPVHPAGRPFVGAGLALALA
MLBr_00311|M.leprae_Br4923 MARRPRAESSKE-----GPAHLLELVRSAVPPVHSAGHPFISAGLAVTSA
MAB_0639c|M.abscessus_ATCC_199 MARRPRPAGSEPDS---GIPHIVELVRSTIPPIHPAGLPFIAGGLGLAGL
TH_0813|M.thermoresistible__bu --------------------------------MHPAGLPFVAGGLGLAAA
:*.** **:...*.::
Mflv_0153|M.gilvum_PYR-GCK G--------RKSRWLRNAGVASAAANAAFFRHPPRTPPTRPGVVVAPADG
Mvan_0751|M.vanbaalenii_PYR-1 G--------RKSRWLRNAGVASAAANAAFFRHPPRTPPTRPGVVVAPADG
MSMEG_0861|M.smegmatis_MC2_155 G--------RKRRWMRRAGLISAGANAAFFRHPPRVPPTRPGVVVAPADG
Mb0445c|M.bovis_AF2122/97 G--------HRYRWLRGTGLLAAAACAGFFRHPQRVPPTRPAAIVAPADG
Rv0437c|M.tuberculosis_H37Rv G--------HRYRWLRGTGLLAAAACAGFFRHPQRVPPTRPAAIVAPADG
MMAR_0754|M.marinum_M G--------YRHRWARRTGLLAAGACAGFFRHPPRVPPSRAGAIVAPADG
MUL_1386|M.ulcerans_Agy99 G--------YRHRWARRTGLLAAGACAGFFRHPPRVPPSRAGAIVAPADG
MAV_4713|M.avium_104 G--------RRHRWLRRAGLLAAGACAGFFRHPPRVPPTRPGAIVAPADG
MLBr_00311|M.leprae_Br4923 GAVGQVVTGRDLRWLRRVGLLAASACAVFFRHPSRVPPTRAGVVVAPADG
MAB_0639c|M.abscessus_ATCC_199 G--------VRNRWVRGTGLALAGACAGFFRHPPRVPPNRADVVVAAADG
TH_0813|M.thermoresistible__bu G--------RRRRWLRTAGLTAAGACALFFRHPPRTPPSRPGVVVAPADG
* ** * .*: *.* * ***** *.**.*. .:**.***
Mflv_0153|M.gilvum_PYR-GCK LICLIEDELPPAELELPAVPLPRISIFLSLFDAHVQRAPLAGEVVAVEHR
Mvan_0751|M.vanbaalenii_PYR-1 LICLIEEAVPPSELRLPATPLPRISIFLSLLDAHVQRAPLGGEVIAVEHR
MSMEG_0861|M.smegmatis_MC2_155 LICLLGEATPPAELGLPDIPMQRVSIFLSVLDAHVQRAPIGGEVVAVRHR
Mb0445c|M.bovis_AF2122/97 VICAIDSAAPPAELSMGDTPLPRVSIFLSILDAHVQRAPVSGEVIAVQHR
Rv0437c|M.tuberculosis_H37Rv VICAIDSAAPPAELSMGDTPLPRVSIFLSILDAHVQRAPVSGEVIAVQHR
MMAR_0754|M.marinum_M VICVIDTAAPPAELSMGDAPLPRVSIFLSVFDAHVQRAPVSGEVVAVQHR
MUL_1386|M.ulcerans_Agy99 VICVIDTAAPPAELSMGDAPLPRVSIFLSVFDAHVQRAPVSGEVVAVQHR
MAV_4713|M.avium_104 EICVIDVATPPAELSMGDVALPRVSIFLSLLDAHVQRAPVSGEVIDVQHR
MLBr_00311|M.leprae_Br4923 MICVIDSATPPAELSMGNMSLPRVSIFLSLLDVHVQRAPISGEVIAVQYQ
MAB_0639c|M.abscessus_ATCC_199 QVCLVDRAVPPPELGLPAEPLPRISIFLSVFDVHVQRVPVAGEATAVIHR
TH_0813|M.thermoresistible__bu RITLIDRVTPPEELGMPAAPMTRISIFLSLFDVHVQRAPIGGEVVAVVHR
: : ** ** : .: *:*****::*.****.*:.**. * ::
Mflv_0153|M.gilvum_PYR-GCK PGLFGSAELAAASADNERNSVVIRSPEGAEVIAVQIAGLLARRIVCNVKS
Mvan_0751|M.vanbaalenii_PYR-1 PGLFGSADLAAASADNERNSIVIRSPEGAEVIAVQIAGLLARRIVCDVEP
MSMEG_0861|M.smegmatis_MC2_155 PGRFHSAELEAASEDNERNSVVIRTPEGLHIIAVQIAGLIARRIVCDVHV
Mb0445c|M.bovis_AF2122/97 PGRFGSADLPEASDDNERTSVRIRMPNGAEVVAVQIAGLVARRIVCDAHV
Rv0437c|M.tuberculosis_H37Rv PGRFGSADLPEASDDNERTSVRIRMPNGAEVVAVQIAGLVARRIVCDAHV
MMAR_0754|M.marinum_M PGRFGSADLPAASDDNERNSVRIRTANGAEVVAVQVAGLVARRIVCDAHV
MUL_1386|M.ulcerans_Agy99 PGRFGSADLPAASNDNERNSVRIRTANGAEVVAVQVAGLVARRIVCDAHV
MAV_4713|M.avium_104 PGRFGSADLAAASTENERTSLRIRTPGGAEVVAVQVAGLLARRIICDAHV
MLBr_00311|M.leprae_Br4923 PGRFGAADLAPASTENERTSVRIRTAGGTEVVVVQIAGLLARRIVCYAHI
MAB_0639c|M.abscessus_ATCC_199 SGQFLSADRAEASVANERNSVQIRTRTGHDVIVVQIAGLIARRIVCHAKV
TH_0813|M.thermoresistible__bu PGEFGSADRGRASTDNERNSMWIRTPDGVDIAVVQIAGLLARRIVCDATA
.* * :*: ** ***.*: ** * .: .**:***:****:* .
Mflv_0153|M.gilvum_PYR-GCK GDKVGLGDTYGLIRYGSRLDTYLPAGSDVLVEVGQRAVAGETVLAELP-
Mvan_0751|M.vanbaalenii_PYR-1 GDTVGLGDTYGLIRYGSRLDTYLPAGSDILVDVGQRTLAGETVLAELPR
MSMEG_0861|M.smegmatis_MC2_155 GDKLSIGDTYGLIRYGSRLDTYFPADARVLVSHGQRTLAGETVLAELA-
Mb0445c|M.bovis_AF2122/97 GDKLAIGDTYGLIRFGSRLDTYLPAGAEPIVNVGQRAVAGETVLAECR-
Rv0437c|M.tuberculosis_H37Rv GDKLAIGDTYGLIRFGSRLDTYLPAGAEPIVNVGQRAVAGETVLAECR-
MMAR_0754|M.marinum_M GDKLAIGDTYGLIRFGSRLDTYLPPGTEPVVRVGQRTIAGETILADLP-
MUL_1386|M.ulcerans_Agy99 GDKLAIGDTYGLIRFGSRLDTYLPPGTEPVVIVGQRTIAGETILADLP-
MAV_4713|M.avium_104 GDKLSIGDTYGLIRFGSRLDTYLPAGAQPLVTVGQRAIAGETVLAELP-
MLBr_00311|M.leprae_Br4923 GDKLTIGDTYGLIRFGSRLDTYLPPGTEPVVQVGQRAVAGETVLADLT-
MAB_0639c|M.abscessus_ATCC_199 GDQLSIGDTYGLIRFGSRVDTYLPEGSKILVQQGQRAVGAETVLAELP-
TH_0813|M.thermoresistible__bu GDKLTVGQTYGLIRFGSRLDTYVPEGATVLVESDQRAVGGETVLAELPR
** : :*:******:***:***.* .: :* .**::..**:**: