For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MCRHLGWLGAQVAVSSLVLDPPQGLRVQSYAPRRQKHGLMNADGWGVGFFDGAIPRRWRSPAPLWGDTSF HSVAPALRSHCILAAVRSATVGMPIEVSATPPFTDGHWLLAHNGVVDRAVLPAGPAAESVCDSAILAATI FAHGLDALGDTIVKVGAADPNARLNILAANGSRLIATTWGDTLSILRRADGVVLASEPYDDDSGWGDVPD RHLVEVTQKGVTLTALDRAKGPR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3728c | - | - | 100% (233) | hypothetical protein Mb3728c |
M. bovis AF2122 / 97 | Mb1090 | - | 5e-09 | 28.46% (260) | hypothetical protein Mb1090 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1317 | - | 2e-98 | 75.22% (226) | hypothetical protein Mflv_1317 |
M. tuberculosis H37Rv | Rv3702c | - | 1e-136 | 100.00% (233) | hypothetical protein Rv3702c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0371 | - | 5e-88 | 68.14% (226) | hypothetical protein MAB_0371 |
M. marinum M | MMAR_5213 | - | 1e-107 | 77.22% (237) | hypothetical protein MMAR_5213 |
M. avium 104 | MAV_0401 | - | 1e-110 | 80.52% (231) | hypothetical protein MAV_0401 |
M. smegmatis MC2 155 | MSMEG_6248 | - | 1e-96 | 74.01% (227) | hypothetical protein MSMEG_6248 |
M. thermoresistible (build 8) | TH_0065 | - | 2e-92 | 71.62% (229) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_4286 | - | 1e-106 | 76.79% (237) | hypothetical protein MUL_4286 |
M. vanbaalenii PYR-1 | Mvan_5484 | - | 2e-97 | 74.78% (226) | hypothetical protein Mvan_5484 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3728c|M.bovis_AF2122/97 --MCRHLGWLGAQVAVSSLVLDPPQGLRVQSYAPRRQKHGLMNADGWGVG Rv3702c|M.tuberculosis_H37Rv --MCRHLGWLGAQVAVSSLVLDPPQGLRVQSYAPRRQKHGLMNADGWGVG MMAR_5213|M.marinum_M --MCRHLGWLGSEVTLSSLILDPPYGLRVQSYAPRRQKHCLMNADGWGAG MUL_4286|M.ulcerans_Agy99 --MCRHLGWLGSEVTLSSLILDPPYGLRVQSYAPRRQKHCLMNADGWGAG MAV_0401|M.avium_104 --MCRHLGWLGADATVSSLMLEPPFGLRVQSYAPRRQKHGLLNADGWGAG Mflv_1317|M.gilvum_PYR-GCK --MCRHLAWLGEPVSPAALMLDPPSGLLVQSYAPRRQKHGLMNADGWGVG Mvan_5484|M.vanbaalenii_PYR-1 MDMCRHLGWLGDPVSVASLILEPPSGLLVQSYSPRRQKHGLMNADGWGVG MSMEG_6248|M.smegmatis_MC2_155 --MCRHVAWLGAPRSLADLVLDPPQGLLVQSYAPRRQKHGLMNADGWGAG TH_0065|M.thermoresistible__bu --MCRHLGWLGRPRSIAELMLEPPYGLLVQSYAPRRQKYGLLNADGWGVG MAB_0371|M.abscessus_ATCC_1997 --MCRHLGWLGAPRSLSSLMLEPPHGLVVQSYSPRRQKHGLVNADGWGAG ****:.*** : : *:*:** ** ****:*****: *:******.* Mb3728c|M.bovis_AF2122/97 FFDG----AIPRRWRSPAPLWGDTSFHSVAPALRSHCILAAVRSATVGMP Rv3702c|M.tuberculosis_H37Rv FFDG----AIPRRWRSPAPLWGDTSFHSVAPALRSHCILAAVRSATVGMP MMAR_5213|M.marinum_M FFDSRDDDPAPRRWRSPAPLWGDASFDSVAPALRSSCVVAAVRSATVGMP MUL_4286|M.ulcerans_Agy99 FFDSRYDDPAPRRWRSPAPLWGDASFDSVAPALRSSCVVAAVRSATVGMP MAV_0401|M.avium_104 FFDG----EVPRRWRSPAPLWGDVSFESVAPALHSHCVVAAVRSATAGMP Mflv_1317|M.gilvum_PYR-GCK FFDG----GVPRRWRSAAPLWGDASFASVAPALSSRCVVAAVRSASVGMP Mvan_5484|M.vanbaalenii_PYR-1 FFDG----AVARRWRSAAPLWGDASFASVAPALRSGCVVAAVRSASVGMP MSMEG_6248|M.smegmatis_MC2_155 FFDDE---GVARRWRSDKPLWGDASFASVAPALRSRCVLAAVRSATIGMP TH_0065|M.thermoresistible__bu FFDDD---GVARRWRSATPLWGDASFASIAPVLRSGCVVAAVRSATVGMP MAB_0371|M.abscessus_ATCC_1997 FFAEG----ASRRWRSARPLWGDASFASVAPVLRSGCVVAAVRSASVGMP ** .***** *****.** *:**.* * *::******: *** Mb3728c|M.bovis_AF2122/97 IEVSATPPFTDGHWLLAHNGVVDRAVLPAGPA-AESVCDSAILAATIFAH Rv3702c|M.tuberculosis_H37Rv IEVSATPPFTDGHWLLAHNGVVDRAVLPAGPA-AESVCDSAILAATIFAH MMAR_5213|M.marinum_M IDISATAPFTDGRWLLSHNGIVDRAVLPRSDS-AESVCDSALLAAAIFER MUL_4286|M.ulcerans_Agy99 IDISATAPFTDGRWLLSHNGIVDRAVLQRSDS-AESVCDSALLAAAIFER MAV_0401|M.avium_104 IEISATAPFTDGRWLLSHNGVVDRSVLPVTSR-AESVCDSAILAAVIFER Mflv_1317|M.gilvum_PYR-GCK IEASASAPFSDGTWLLSHNGLVDRAILPATRD-AESTNDSALLAALIFDR Mvan_5484|M.vanbaalenii_PYR-1 IEASASAPFTDGTWLLSHNGLVDRAVLPSSPR-AESTNDSALLAALIFDR MSMEG_6248|M.smegmatis_MC2_155 IEPSASAPFSDGQWLLSHNGLVDRGVLPLTGA-AESTVDSAIVAALIFSR TH_0065|M.thermoresistible__bu IEPSASAPFTDGHWLLSHNGRVDRAVLDTAAARAESTVDSALLAATIFER MAB_0371|M.abscessus_ATCC_1997 IEETAAAPFTDGTWLLSHNGIVDRGAVGEAFG-AESVVDSAILAARIFAS *: :*:.**:** ***:*** ***. : ***. ***::** ** Mb3728c|M.bovis_AF2122/97 GLDALGDTIVKVGAADPNARLNILAANGSRLIATTWGDTLSILRRADGVV Rv3702c|M.tuberculosis_H37Rv GLDALGDTIVKVGAADPNARLNILAANGSRLIATTWGDTLSILRRADGVV MMAR_5213|M.marinum_M GLDALGDTIREIGAADPGARLNVLAANGSRLLATTWNETLSILRRPDGVV MUL_4286|M.ulcerans_Agy99 GLDALGDTIREIGAADPGARLNVLAANGSRLLATTWNETLSILRRPDGVV MAV_0401|M.avium_104 GLDALGEVIAEIGAADPAARLNILAANGSRLLATAWGDTLSILRRADGVV Mflv_1317|M.gilvum_PYR-GCK GLDALGQTIVAVAADDPNARLNILAANGSRIVATTWGDTLSVLRRDDGVV Mvan_5484|M.vanbaalenii_PYR-1 GIDELGATIAGVAAEDPNARLNILAGNGTRLLATTWGDTLSVLRRDDGVV MSMEG_6248|M.smegmatis_MC2_155 GLDALGATIAEVGELDPNARLNILAANGSRLLATTWGDTLSVLHRPDGVV TH_0065|M.thermoresistible__bu GLDRLGETLRDVAAADPDARLNILAGNGTRLLATTWGDTLSVLAGDDGVV MAB_0371|M.abscessus_ATCC_1997 GVQNLGETVRQIGAADPGARLNILAANGNELVATTWGDTLSILEAADGVV *:: ** .: :. ** ****:**.**..::**:*.:***:* **** Mb3728c|M.bovis_AF2122/97 LASEPYDDDSGWGDVPDRHLVEVTQKGVTLTALDRAKGPR Rv3702c|M.tuberculosis_H37Rv LASEPYDDDSGWGDVPDRHLVEVTQKGVTLTALDRAKGPR MMAR_5213|M.marinum_M VASEPYDNDTDWEDVPDRHLVEVTAEGVTLTALEPTKGTR MUL_4286|M.ulcerans_Agy99 VASEPYDNDTDWEDVPDRHLVEVTAEGVTLTALEPTKGTR MAV_0401|M.avium_104 VASEPYDDDSDWEDVPDRHLVDVTADGVTLTPLDHPKGF- Mflv_1317|M.gilvum_PYR-GCK LASEPYDDDPAWEEIPDRHLVEVADAHVHLTPLKGS---- Mvan_5484|M.vanbaalenii_PYR-1 VASEPYDDDPAWQEVPDRHLVEVDGAHVHLRPLKGS---- MSMEG_6248|M.smegmatis_MC2_155 LASEPYDDDPGWSDIPDRHLVDVRDAHVVVTPL------- TH_0065|M.thermoresistible__bu LASEPYDDDPRWRDVPDRHLVEVTGAGVEMMALEGTA--- MAB_0371|M.abscessus_ATCC_1997 VASEPYDDDPSWVDIPDRRLVRVRDGKVEIEGL------- :******:*. * ::***:** * * : *