For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTSFAHPGTRGLSTVFGLMMVGSAAVGSHGLAVVVGLAAVIAVGVAAVFRLAATLAVVLSVVMIVVSGPT HVLAALSGFAPPSTWCADTGPVLSPGAGRRPLPPLVSRSLGWLRRRSRCKCHGCRWRHRWPCWLPTCWPP VRSRGEPPAGRSGRCALLTIGYQSITWRVCYQLITEPSSETSLPTSGITSTTIHRR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3187c | - | - | 100% (196) | integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_0474 | - | 7e-06 | 47.83% (69) | hypothetical protein Mflv_0474 |
| M. tuberculosis H37Rv | Rv3162c | - | 1e-37 | 86.73% (98) | integral membrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1401 | - | 3e-13 | 48.72% (78) | hypothetical protein MMAR_1401 |
| M. avium 104 | MAV_4049 | - | 5e-09 | 50.79% (63) | hypothetical protein MAV_4049 |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2475 | - | 4e-13 | 48.72% (78) | hypothetical protein MUL_2475 |
| M. vanbaalenii PYR-1 | Mvan_0182 | - | 5e-05 | 42.62% (61) | hypothetical protein Mvan_0182 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0474|M.gilvum_PYR-GCK --MTRSLLPV-----AFGVLMTGAAAYRASGPALLVLGAAVAAVVASAWL
Mvan_0182|M.vanbaalenii_PYR-1 --------------------MVAAAAYRVHGYGVVAAAAALAAVVVSAWW
MAV_4049|M.avium_104 MDSGRTNLPARVGAPGFGLLMVGLAAGGRPESAAVAVAAALIAVAAGTVL
MMAR_1401|M.marinum_M -MGSVAGTGSRVLSPVFGLLMVGAAGAGAQGPVIVALAGAVIALVAGILV
MUL_2475|M.ulcerans_Agy99 -MGSVAGTGSRVLSPVFGLLMVGAAGAGAQGPVIVALAGAVIALVAGILV
Mb3187c|M.bovis_AF2122/97 -MTSFAHPGTRGLSTVFGLMMVGSAAVGSHGLAVVVGLAAVIAVGVAAVF
Rv3162c|M.tuberculosis_H37Rv -MTSFAHPGTRGLSTVFGLMMVGSAAVGSHGLAVVVGLAAVIAVGVAAVF
*.. *. :. .*: *: ..
Mflv_0474|M.gilvum_PYR-GCK RPAGTVAVVLVVGAIVLTPSAPLHTVLAGL------AATVYLVVLHTVAT
Mvan_0182|M.vanbaalenii_PYR-1 RPAATGAVLLAVLTTVLADAAPMHTVLAGL------AAAVYLVLRHTNPT
MAV_4049|M.avium_104 RPAATIAVLLAAVTVVTSNPPPACVALSGL------CATAYLVCRHAVGT
MMAR_1401|M.marinum_M RAAATVAVLLTVLALVLSAPSQLLAALCGL------CAVAYLVSRHAAGA
MUL_2475|M.ulcerans_Agy99 RAAATVAVLLTVLALVLSAPPQLLAALCGL------CAVAYLVSRHAAGA
Mb3187c|M.bovis_AF2122/97 RLAATLAVVLSVVMIVVSGPTHVLAALSGFAPPSTWCADTGPVLSPGAGR
Rv3162c|M.tuberculosis_H37Rv RLAATLAVVLSVVMIVVSGPTHVLAALSGF------CAAVYLVCRYGAG-
* *.* **:* . * : .. ..*.*: .* . *
Mflv_0474|M.gilvum_PYR-GCK ------------------------------VP-------TMVFAVGFGAV
Mvan_0182|M.vanbaalenii_PYR-1 ------------------------------AP-------TAFFAVGFAAA
MAV_4049|M.avium_104 P-----------------------------VPVILGSRTTAVAAVGFSFA
MMAR_1401|M.marinum_M P-----------------------------AGVAMATWPTIVAALGFAFA
MUL_2475|M.ulcerans_Agy99 P-----------------------------AGVAMATWPTIVAALGFAFA
Mb3187c|M.bovis_AF2122/97 RPLPPLVSRSLGWLRRRSRCKCHGCRWRHRWPCWLPTCWPPVRSRGEPPA
Rv3162c|M.tuberculosis_H37Rv -----VVAGS--------------------WP-------TTVAAVGFTFA
. . : * .
Mflv_0474|M.gilvum_PYR-GCK A---------AVVAALPLGVPWLPLIAA--PALLAGYLLALRPFTR-
Mvan_0182|M.vanbaalenii_PYR-1 A---------AAVLALPVHVPWLPLAAP--LALLAGYLLALKPFTR-
MAV_4049|M.avium_104 G---------LVATSFPLQLPWLPLLAP--LGALAIYLLAIRPFLS-
MMAR_1401|M.marinum_M G---------LAATAFPLQVPWLPLAAP--LAVLAIYVLATRPFLH-
MUL_2475|M.ulcerans_Agy99 G---------LAATAFPLQVPWLPLAAP--LAVLAIYVLATRPFLH-
Mb3187c|M.bovis_AF2122/97 GRSGRCALLTIGYQSITWRVCYQLITEPSSETSLPTSGITSTTIHRR
Rv3162c|M.tuberculosis_H37Rv G---------LAATSFPLQVPWLPLAAP--LAVLATYVLATRPFSR-
. ::. : : : . *. :: .: