For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VPAPVSVRDDLCRLVALSPGDGRIAGLVRQVCARALSLPSLPCEVAVNEPESPAEAVVAEFAEQFSVDVS AITGEQRSLLWTHLGEDAFGAVVAMYIADFVPRVRAGLEALGVGKEYLGWVTGPISWDHNTDLSAAVFNG FLPAVARMRALDPVTSELVRLRGAAQHNCRVCKSLREVSALDAGGSETLYGEIERFDTSVLLDVRAKAAL RYADALIWTPAHLAVDVAVEVRSRFSDDEAVELTFDIMRNASNKVAVSLGADAPRVQQGTERYRIGLDGQ TVFG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2340c | - | - | 100% (284) | hypothetical protein Mb2340c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_2734 | - | 4e-72 | 51.65% (273) | hypothetical protein Mflv_2734 |
| M. tuberculosis H37Rv | Rv2313c | - | 1e-160 | 100.00% (284) | hypothetical protein Rv2313c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_3614 | - | 1e-120 | 77.22% (281) | hypothetical protein MMAR_3614 |
| M. avium 104 | MAV_2093 | - | 1e-111 | 73.33% (285) | hypothetical protein MAV_2093 |
| M. smegmatis MC2 155 | MSMEG_4456 | - | 8e-70 | 53.28% (274) | hypothetical protein MSMEG_4456 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_3802 | - | 4e-75 | 54.95% (273) | hypothetical protein Mvan_3802 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2340c|M.bovis_AF2122/97 MPAPVSVR-DDLCRLVALSPG---DGRIAGLVRQVCARALSLPSLPCEVA
Rv2313c|M.tuberculosis_H37Rv MPAPVSVR-DDLCRLVALSPG---DGRIAGLVRQVCARALSLPSLPCEVA
MMAR_3614|M.marinum_M MAAAAPVG-DALARLVVVSPG---DGRIAGLVRQVCARTLGLPALPAEVV
MAV_2093|M.avium_104 MAAPVSLREDQLTRLVAVFPGSPSEARVAALIRRVCAQTSSLPPLPAPME
MSMEG_4456|M.smegmatis_MC2_155 ----MSHELHLLAALSALSPPK--LADVNADIREVCAAVTGLSPLPAESR
Mflv_2734|M.gilvum_PYR-GCK --MTD-AMAQRLARLVGLSAG---DDRADTLIRLTCGRALSLTPLPPPAD
Mvan_3802|M.vanbaalenii_PYR-1 --MTERALPERLAGLVALSSG---EERADTLIRLTCGRALSLPPLPTPTD
. * * : . :* .*. . .*..**
Mb2340c|M.bovis_AF2122/97 VNEPESPAEAVVAEFAEQFSVDVSAITGEQRSLLWTHLGEDAFGAVVAMY
Rv2313c|M.tuberculosis_H37Rv VNEPESPAEAVVAEFAEQFSVDVSAITGEQRSLLWTHLGEDAFGAVVAMY
MMAR_3614|M.marinum_M VAEPQSAAEAVVAEFAEQFSADVSSISAEQRSRLFKQLGNSTLGAVVSIF
MAV_2093|M.avium_104 VGEPESETEAAVAEFAEQFSADVSAITHAQRSRLSKQLGDRTFGVVVQMY
MSMEG_4456|M.smegmatis_MC2_155 GG----AVDPMVSEFAEQFSVDVTGINPAQRLAFSDLLGVETFRVATLIF
Mflv_2734|M.gilvum_PYR-GCK LPDAHTDDDAVLVAFAEQFSVDVTGIGENQRNRFVKVYGDNAFRVVVAIF
Mvan_3802|M.vanbaalenii_PYR-1 LPDEYTDEDAVLVAFAEQFAVDVTGIGDIQRERLMDVFGDNAFRVVVAIF
:. : *****:.**:.* ** : * :: ... ::
Mb2340c|M.bovis_AF2122/97 IADFVPRVRAGLEALGVGKEYLGWVTGPISWDHNTDLSAAVFNGFLPAVA
Rv2313c|M.tuberculosis_H37Rv IADFVPRVRAGLEALGVGKEYLGWVTGPISWDHNTDLSAAVFNGFLPAVA
MMAR_3614|M.marinum_M IADFVPRVRAGLQALGVGRDYLGWVGAPIEWDHSTDPSQVVFNEFLPAVA
MAV_2093|M.avium_104 IADFVPRVRAGLDALEVGSRYLGWLSGPISWDYGSDPSDLVFNDFLIAVA
MSMEG_4456|M.smegmatis_MC2_155 IADFVPRVLAGLSSLGVG---VGVAVDGDIWDHDTDPGDFVLDVFGPAVG
Mflv_2734|M.gilvum_PYR-GCK VADFLPRVWAGCDALGLGR--PGWS-AEVQIDRDTDPVGAVLGGFVPAVA
Mvan_3802|M.vanbaalenii_PYR-1 IADFVPRVWAGCEALGLGK--PGWS-ADVTLDRDTDPVAKVLGGLVPAVA
:***:*** ** .:* :* * * .:* *:. : **.
Mb2340c|M.bovis_AF2122/97 RMRALDPVTSELVRLRGAAQHNCRVCKSLREVSALDAGGSETLYGEIERF
Rv2313c|M.tuberculosis_H37Rv RMRALDPVTSELVRLRGAAQHNCRVCKSLREVSALDAGGSETLYGEIERF
MMAR_3614|M.marinum_M RMRALDPVISELVRLRGAAQHNCRLCKSLRESTALDAGGSEPLYGEIEGF
MAV_2093|M.avium_104 RMRALDPVTSELVRLRGAAQHHCRLCNSLREGSALDAGGSETLYEEIERF
MSMEG_4456|M.smegmatis_MC2_155 RMRALDPVTTEIVRLRGARVHNCRLCKSLREATALEAGACETLYDQIDRY
Mflv_2734|M.gilvum_PYR-GCK KLREVDPVTTELVRLRGAEAHNCRLCKSLREGHALDAGGSEDLYRQIADY
Mvan_3802|M.vanbaalenii_PYR-1 RLHDLDPVTTEVVRLRGAEAHNCRLCKSLREGHALDAGGSEDLYRQIADF
::: :*** :*:****** *:**:*:**** **:**..* ** :* :
Mb2340c|M.bovis_AF2122/97 DTSVLLDVRAKAALRYADALIWTPAHLAVDVAVEVRSRFSDDEAVELTFD
Rv2313c|M.tuberculosis_H37Rv DTSVLLDVRAKAALRYADALIWTPAHLAVDVAVEVRSRFSDDEAVELTFD
MMAR_3614|M.marinum_M EHSVVLDDRAKAALRYTDTLIWTPAHLAVDDAAEVRSRFSEAEAIELTLD
MAV_2093|M.avium_104 ESSGLLDERAKAALRYTDALIWTPAHLVADDVAEVRSRFSEAEAVELTFD
MSMEG_4456|M.smegmatis_MC2_155 ETS-EMSDRHKAALRYVDAMIWTPSQAPGD---ELLRHFSHEEAVELTLD
Mflv_2734|M.gilvum_PYR-GCK ERADGLTEAHKSALRYVDALVWTPSAIDDAVVDGMRRHFSEKQMLEITLD
Mvan_3802|M.vanbaalenii_PYR-1 ESADGLSEAHKAALRYVDALIWSPSRIDAAVADGVRRHFSESQMLELTLD
: : : *:****.*:::*:*: : :**. : :*:*:*
Mb2340c|M.bovis_AF2122/97 IMRNASNKVAVSLGADAPRVQQGTERYRIGLDGQTVFG
Rv2313c|M.tuberculosis_H37Rv IMRNASNKVAVSLGADAPRVQQGTERYRIGLDGQTVFG
MMAR_3614|M.marinum_M IMRNASNKIAVSLGADAPRVERGTERYRIGADGQTVFS
MAV_2093|M.avium_104 IMRNASNKVAVSLAADAPRVENGTQRYLIGADGQTVFS
MSMEG_4456|M.smegmatis_MC2_155 VMRNASNKVAVALGVDAPRVSEGTEQYRLGADGQPIYT
Mflv_2734|M.gilvum_PYR-GCK VMRNAANKIAVSMAADAPRVAEGTERYEVDEQGQTIFA
Mvan_3802|M.vanbaalenii_PYR-1 VMRNAANKIAVSLAADAPRVAEGTERYEVDEQGQTIFA
:****:**:**::..***** .**::* :. :**.::