For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MVEGHTHTISGAVECRTSPAVRTATPSESGTQTTRVNAHDDSASVTLSLSDSTPPDVNGFGISLKIGSVD YQMPYQPVQSPTQVEATRQGKSYTLTGTGHAVIPGQTGMRELPFGVHVTCP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2313 | lppOb | - | 100% (121) | lipoprotein lppOb |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv2290 | lppO | 2e-67 | 99.17% (121) | lipoprotein lppO |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2379 | - | 4e-05 | 28.46% (123) | lipoprotein LpqH precursor |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_2140 | - | 5e-39 | 56.20% (121) | LppO protein |
M. smegmatis MC2 155 | MSMEG_6316 | - | 2e-06 | 26.61% (124) | lipoprotein LpqH |
M. thermoresistible (build 8) | TH_1652 | - | 3e-05 | 25.20% (123) | lipoprotein LpqH |
M. ulcerans Agy99 | MUL_4389 | lpqH | 6e-05 | 22.76% (123) | 19 kDa lipoprotein antigen precursor LpqH |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment TH_1652|M.thermoresistible__bu ------MYR-GLLAAIGGAALVVAGLAGCSSNDEGSTAADETTTGEAVDE MUL_4389|M.ulcerans_Agy99 ------MKR-GPTVAVAGAAILVAGLSGCSSNKSTTSGGESSSTGS---- MAB_2379|M.abscessus_ATCC_1997 ------MQRTGSVVVIGAGAIIALGLAGCSGD-----GNESAP------- MSMEG_6316|M.smegmatis_MC2_155 ------MKR-GFLVAVGSAALVVAGLSGCSSDDKSAEASEASPTANATVD Mb2313|M.bovis_AF2122/97 -------------------------------------------------- Rv2290|M.tuberculosis_H37Rv MTDPRHTVRIAVGATALGVSALGATLPACSAHSG-PGSPPSAPSAP---- MAV_2140|M.avium_104 MRNLNDRRRVVGAATALGVLALGAGLPGCSGKEGHPAATPSSTAAL---- TH_1652|M.thermoresistible__bu VIVEEEEETTTTGAAAEG---AATVSIDGQEQEIQGTVACTQTGDTVMIA MUL_4389|M.ulcerans_Agy99 -------TSASTGGGQAS---GTKVLIDGQDQHVTGSVVCTTAAGNVNIA MAB_2379|M.abscessus_ATCC_1997 SSAEKTTVSAEGGAAAMN--SSAKVVVDGKEKKVEGAIACSTAAGQVNIG MSMEG_6316|M.smegmatis_MC2_155 STASPGTSVAAGDATATTGTGTARVVIDGAEHPIEGSVVCATVAGNVSVT Mb2313|M.bovis_AF2122/97 ----------MVEGHTHT---ISGAVECRTSPAVRTATPSESGTQTTRVN Rv2290|M.tuberculosis_H37Rv -----AAATVMVEGHTHT---ISGVVECRTSPAVRTATPSESGTQTTRVN MAV_2140|M.avium_104 -----ASTTVMIDGNKHT---MIAGVDCTSAAAQPNASPPESGDLTTRIS . : . : TH_1652|M.thermoresistible__bu IGDATQGISATVSTGDEPQVSQVALGNVDG---VALTYQEGTGQGEAAAE MUL_4389|M.ulcerans_Agy99 IGGAATGIAAVLTDANPPEVKSVGLGNVNG---VTLGYTSGTGQGNASAT MAB_2379|M.abscessus_ATCC_1997 MGAGMQAIAVVLSDGDSPKVTSVGLGNIDG---VTLGFADGAPGGKATAT MSMEG_6316|M.smegmatis_MC2_155 VGQGTSAVTATLSEGDQPAVSAVALGNIDG---VSLGYTPGVPGGSAEAT Mb2313|M.bovis_AF2122/97 AHDDSASVTLSLSDSTPPDVNGFGISLKIGSVDYQMPYQPVQSPTQVEAT Rv2290|M.tuberculosis_H37Rv AHDDSASVTLSLSDSTPPDVNGFGISLKIGSVDYQMPYQPVQSPTQVEAT MAV_2140|M.avium_104 VHDDSASVSLAVSDEQPPTVDGFAISLKLDNGQYQLPYQGTKSPTQVQAT .:: :: * * ..:. . : : .. * TH_1652|M.thermoresistible__bu KDGDTYKITGTATGADIADPGAGMVSKPFEIEVTCPGS MUL_4389|M.ulcerans_Agy99 KDGSSYKISGTATGVDMANP-MSPVNKPFEINVTCP-- MAB_2379|M.abscessus_ATCC_1997 KDGKKYTVTGTATGVDTANPMQ-PIEKPFEIEVTCP-- MSMEG_6316|M.smegmatis_MC2_155 KDGNKYTIKGSATGADMANPMAGAVTKPFELEITCP-- Mb2313|M.bovis_AF2122/97 RQGKSYTLTG--TGHAVIPGQTGMRELPFGVHVTCP-- Rv2290|M.tuberculosis_H37Rv RQGKSYTLTG--TGHAVIPGQTGMRELPFGVHVTCP-- MAV_2140|M.avium_104 KDGKSYTVTG--TGQATTPGQSGTRDVTFGIHVTCP-- ::*..*.:.* ** .* :.:***