For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MIVDTSAVVALVQGERPHATLVAAALAGAHSPVMSAPTVAECLIVLTARHGPVARTIFERLRSEIGLSVS SFTAEHAAATQRAFLRYGKGRHRAALNFGDCMTYATAQLGHQPLLAVGNDFPQTDLEFRGVVGYWPGVA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2004c | - | - | 100% (139) | hypothetical protein Mb2004c |
M. bovis AF2122 / 97 | Mb0640 | - | 1e-19 | 38.10% (126) | hypothetical protein Mb0640 |
M. bovis AF2122 / 97 | Mb2780c | - | 6e-18 | 38.58% (127) | hypothetical protein Mb2780c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv1982c | - | 1e-76 | 100.00% (139) | hypothetical protein Rv1982c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_1284 | - | 1e-18 | 38.89% (126) | PilT domain-containing protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1171 | - | 2e-18 | 40.16% (127) | PilT domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_1284|M.smegmatis_MC2_155 MVIDTSALVAILTDE-PDAELLEGAVADDPVRTMSTASYLETAIVIESRF Mvan_1171|M.vanbaalenii_PYR-1 MIADSSAIIAILRDE-DDAVDYARALAAADVRRLSAASYLECGIVLDAQR Mb2004c|M.bovis_AF2122/97 MIVDTSAVVALVQGERPHATLVAAALAGAHSPVMSAPTVAECLIVLTARH Rv1982c|M.tuberculosis_H37Rv MIVDTSAVVALVQGERPHATLVAAALAGAHSPVMSAPTVAECLIVLTARH *: *:**::*:: .* .* *:* :*:.: * **: :: MSMEG_1284|M.smegmatis_MC2_155 GEPGGRELDLWLHRASVALVAVDADQADAARLAYRRYGKGR-HRAGLNYG Mvan_1171|M.vanbaalenii_PYR-1 DPVVSRALDELIDEAAMTIEPVTERQAKLARRAYADFGKGSGHPAGLNFG Mb2004c|M.bovis_AF2122/97 GPVARTIFERLRSEIGLSVSSFTAEHAAATQRAFLRYGKGR-HRAALNFG Rv1982c|M.tuberculosis_H37Rv GPVARTIFERLRSEIGLSVSSFTAEHAAATQRAFLRYGKGR-HRAALNFG . :: . .::: .. :* :: *: :*** * *.**:* MSMEG_1284|M.smegmatis_MC2_155 DCFSYALAKVSGQPLLFKGEAFRLTDVAAVH--------- Mvan_1171|M.vanbaalenii_PYR-1 DCLSYALALDRREPLLWKGNDFGHTGIASALE-------- Mb2004c|M.bovis_AF2122/97 DCMTYATAQLGHQPLLAVGNDFPQTDLEFRGVVGYWPGVA Rv1982c|M.tuberculosis_H37Rv DCMTYATAQLGHQPLLAVGNDFPQTDLEFRGVVGYWPGVA **::** * :*** *: * *.: