For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MDQQSTRTDITVNVDGFWMLQALLDIRHVAPELRCRPYVSTDSNDWLNEHPGMAVMREQGIVVNDAVNEQ VAARMKVLAAPDLEVVALLSRGKLLYGVIDDENQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGNDITVD DVTVSDSASIAALVMDGLESIHHADPAAINAVNVPMEEMLEATKSWQESGFNVFSGGDLRRMGISAATVA ALGQALSDPAAEVAVYARQYRDDAKGPSASVLSLKDGSGGRIALYQQARTAGSGEAWLAICPATPQLVQV GVKTVLDTLPYGEWKTHSRV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1822 | - | - | 100% (300) | hypothetical protein Mb1822 |
M. bovis AF2122 / 97 | Mb0297 | - | 4e-06 | 24.86% (173) | hypothetical protein Mb0297 |
M. bovis AF2122 / 97 | Mb3896 | - | 2e-05 | 24.61% (191) | hypothetical protein Mb3896 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0322 | - | 2e-06 | 25.28% (178) | putative DNA-binding protein |
M. tuberculosis H37Rv | Rv1794 | - | 1e-172 | 100.00% (300) | hypothetical protein Rv1794 |
M. leprae Br4923 | MLBr_01540 | - | 1e-155 | 88.00% (300) | hypothetical protein MLBr_01540 |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_2676 | - | 1e-167 | 96.67% (300) | hypothetical protein MMAR_2676 |
M. avium 104 | MAV_2920 | - | 1e-163 | 94.00% (300) | hypothetical protein MAV_2920 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_2270 | - | 2e-06 | 20.07% (294) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_3081 | - | 1e-167 | 96.33% (300) | hypothetical protein MUL_3081 |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mb1822|M.bovis_AF2122/97 ----------MDQQSTRTDITVNVDGFWMLQALLDIRHVAPELRCRPYVS Rv1794|M.tuberculosis_H37Rv ----------MDQQSTRTDITVNVDGFWMLQALLDIRHVAPELRCRPYVS MMAR_2676|M.marinum_M ----------MDQQSTRTDITVNVDGFWMLQALLDIRHVAPELRCRPYVS MUL_3081|M.ulcerans_Agy99 ----------MDQQSTRTDITVNVDGFWMLQALLDIRHVAPELRCRPYVS MAV_2920|M.avium_104 ----------MDQQSTRTDITVNVDGFWMLQALLDIRHVAPELRCRPYVS MLBr_01540|M.leprae_Br4923 ----------MDHQSTRTDITVNVDGFWLLQALLDIRHVAPELRCRPFVS Mflv_0322|M.gilvum_PYR-GCK --------------MRANAVELSAASAWFLAEELGAGSYPWVLAITPPYS TH_2270|M.thermoresistible__bu MSVPQSLNPNASHIDDVVGVEVTIDGILVIADRLHLTDFPPALGIRPNIP : :. . .: * . * * . Mb1822|M.bovis_AF2122/97 TDSNDWLNEHPGMAVMREQGIVVND-AVNEQVAARMKVLAAPD--LEVVA Rv1794|M.tuberculosis_H37Rv TDSNDWLNEHPGMAVMREQGIVVND-AVNEQVAARMKVLAAPD--LEVVA MMAR_2676|M.marinum_M TDSNDWLNEHPGMAVMREQGIVVGD-TVNEQVAARMRVLAAPD--LEVVA MUL_3081|M.ulcerans_Agy99 TDSNDWLNEHPGMAVMREQGIVVGD-TLNEQVAARMRVLAAPD--LEVVA MAV_2920|M.avium_104 TDSNDWLNDHPGMAVMREQGIVEGD-QVNEQVAARMRVLAAPD--LEVIA MLBr_01540|M.leprae_Br4923 TDSNDWLHEHPGMAVMREQGIVVNG-NVNEHVATRMRVFAAPD--LEVVA Mflv_0322|M.gilvum_PYR-GCK DVSARGPFEREQTEKLRGAGIMTAERTVDPAVARWIRRVCRPTQWLELRF TH_2270|M.thermoresistible__bu QEDIRERVWAQVARDLAAQEVLDAHGRPHPEVAAMVDALSRPDRTLDGRW . : :: . ** : .. * *: Mb1822|M.bovis_AF2122/97 LLSRGKLLYGVIDDENQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGNDI Rv1794|M.tuberculosis_H37Rv LLSRGKLLYGVIDDENQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGNDI MMAR_2676|M.marinum_M LLSRGKLLYGVVDNEDQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGNDI MUL_3081|M.ulcerans_Agy99 LLSRGKLLYGVVDNEDQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGNDI MAV_2920|M.avium_104 LLSRGKLAYGVIDDQNQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGGEI MLBr_01540|M.leprae_Br4923 LLSRGKLLYGAVNDENQPPGSRDIPENEFRVVLVRRGSHWASAVRVGNDI Mflv_0322|M.gilvum_PYR-GCK VGSRGAVLRG---------------------VLARDGAGTVIALRSGGLI TH_2270|M.thermoresistible__bu WRR-------------------DVGEKMIRFVVCRKGDRHVIAARDGDLL *: * * . * * *. : Mb1822|M.bovis_AF2122/97 TVDDVTVSDSASIAALVMDGLESIHHADPAAINAVNVPMEEMLEATKSWQ Rv1794|M.tuberculosis_H37Rv TVDDVTVSDSASIAALVMDGLESIHHADPAAINAVNVPMEEMLEATKSWQ MMAR_2676|M.marinum_M TVDDVSVSDSASIAALVIDGLESIHHADPAAINAVNVPLEEMLEATKSWQ MUL_3081|M.ulcerans_Agy99 TVDDVSVSDSASIAALVIDGLESIHHADPAAINAVNVPLEEMLEATKSWQ MAV_2920|M.avium_104 TVDDVAVADSASIASLVIDALESIHHAEPAAINAVNVPLEEMLEATKSWQ MLBr_01540|M.leprae_Br4923 TIDDVAIADSASITSLVMDGLESIHHADPAAINAVNVPLEEMLEATKSWQ Mflv_0322|M.gilvum_PYR-GCK TLTELDIDHPEALVPVVTAGLS---GRAPARFDGFSLPARVGAKADEQIR TH_2270|M.thermoresistible__bu VLQRIAP--QVGLAGMVTAMLG---PAAPADVEPLTGLASKLSECR---- .: : .:. :* * ** .: .. :. Mb1822|M.bovis_AF2122/97 ESGFNVFSGGDLRRMGISAATVAALGQALSDPAAEVAVYARQ-YRDDAKG Rv1794|M.tuberculosis_H37Rv ESGFNVFSGGDLRRMGISAATVAALGQALSDPAAEVAVYARQ-YRDDAKG MMAR_2676|M.marinum_M ESGFNVFSGGDLRRMGISASTVAALGQALSDPAAEVAVYARQ-YRDDAKG MUL_3081|M.ulcerans_Agy99 ESGFNVFSGGDLRRMGISASTVAALGQALSDPAAEVAVYARQ-YRDDAKG MAV_2920|M.avium_104 ESGFNVFSGGDLRRMGISAATVAALGQALSDPAAEVAVYARQ-YQDDAKG MLBr_01540|M.leprae_Br4923 DAGFNVFSGRDLRRMGISAATVAALGQALSDPAAEAAVYARQ-YRDDAKG Mflv_0322|M.gilvum_PYR-GCK KG---AAVGGLLDYLGIPPSARPVVVAAFEDSRTYVEIVAGQ-HRDGHRV TH_2270|M.thermoresistible__bu -------TASELAQYGIDQASARTYSEIIADPAGWVEITAAERHPGGTTT . * ** :: . : *. . : * : : .. Mb1822|M.bovis_AF2122/97 PSASVLSLKDGSGGRIALYQQARTAGSGEAWLAICPATPQLVQVGVKTVL Rv1794|M.tuberculosis_H37Rv PSASVLSLKDGSGGRIALYQQARTAGSGEAWLAICPATPQLVQVGVKTVL MMAR_2676|M.marinum_M PSASVLSLKDGSGGRIALYQQARTAGSGEAWLAICPATPQLVQVGVKTVL MUL_3081|M.ulcerans_Agy99 PSASVLSLKDGSGGRIALYQQARTAGSGEAWLAICPATPQLVQVGVKTVL MAV_2920|M.avium_104 PSASVLSLKDGSGGRIALYQQARTAGSGEAWLAICPATPQLVQVGVKTVL MLBr_01540|M.leprae_Br4923 PSASVLSLKDSSSGRIAIYQQARTAGLGDAWLAICPATPQLVQLGLKTVL Mflv_0322|M.gilvum_PYR-GCK STDVGVSVVDTVLGRVLVSPAK--ARDGEWISTFAPGDPVAIAAAVERLT TH_2270|M.thermoresistible__bu YTDVAAGVLDSRQGRIVSLPRR---VNGELYGSFLPGTQENLQRSLEALV : .: * **: *: :: *. : .:: : Mb1822|M.bovis_AF2122/97 DTLPYGEWKTHSRV-------------------- Rv1794|M.tuberculosis_H37Rv DTLPYGEWKTHSRV-------------------- MMAR_2676|M.marinum_M DTLPYGEWKTHSRV-------------------- MUL_3081|M.ulcerans_Agy99 DTLPYGEWKTHSRV-------------------- MAV_2920|M.avium_104 DTLPYGEWKTHSRV-------------------- MLBr_01540|M.leprae_Br4923 DTLPYGDWKTHSRV-------------------- Mflv_0322|M.gilvum_PYR-GCK AALPDGPWFPDHALTRDFDERTAERREERCHSPL TH_2270|M.thermoresistible__bu GFLPAGNWFEHTDADTAYSDGTQWN--------- ** * * .