For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MDISRWLERHVGVQLLRLHDAIYRGTNGRIGHRIPGAPPSLLLHTTGAKTSQPRTTSLTYARDGDAYLIV ASKGGDPRSPGWYHNLKANPDVEINVGPKRFGVTAKPVQPHDPDYARLWQIVNENNANRYTNYQSRTSRP IPVVVLTRR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1292c | - | - | 100% (149) | hypothetical protein Mb1292c |
M. bovis AF2122 / 97 | Mb3577 | - | 5e-18 | 39.69% (131) | hypothetical protein Mb3577 |
M. bovis AF2122 / 97 | Mb1584 | - | 9e-15 | 39.20% (125) | hypothetical protein Mb1584 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_2238 | - | 1e-54 | 61.74% (149) | hypothetical protein Mflv_2238 |
M. tuberculosis H37Rv | Rv1261c | - | 3e-87 | 100.00% (149) | hypothetical protein Rv1261c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1980c | - | 2e-35 | 49.62% (133) | hypothetical protein MAB_1980c |
M. marinum M | MMAR_4178 | - | 1e-60 | 74.29% (140) | hypothetical protein MMAR_4178 |
M. avium 104 | MAV_1241 | - | 3e-54 | 73.68% (133) | hypothetical protein MAV_1241 |
M. smegmatis MC2 155 | MSMEG_5030 | - | 1e-54 | 65.28% (144) | hypothetical protein MSMEG_5030 |
M. thermoresistible (build 8) | TH_0360 | - | 6e-20 | 39.71% (136) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_4480 | - | 3e-59 | 72.86% (140) | hypothetical protein MUL_4480 |
M. vanbaalenii PYR-1 | Mvan_4457 | - | 8e-55 | 62.42% (149) | hypothetical protein Mvan_4457 |
CLUSTAL 2.0.9 multiple sequence alignment Mb1292c|M.bovis_AF2122/97 ---------MDISRWLERHVGVQLLRLHDAIYRGTNGRIGHRIP--GAPP Rv1261c|M.tuberculosis_H37Rv ---------MDISRWLERHVGVQLLRLHDAIYRGTNGRIGHRIP--GAPP MMAR_4178|M.marinum_M ---------MSNLTPFEQYVGIPILRLHDTIYRKTNGRIGHRIP--GVPP MUL_4480|M.ulcerans_Agy99 ---------MSNLTPFEQYVGIPILRLHDTIYRKTNGRIGHRIP--GVPP MAV_1241|M.avium_104 -----------------------MLRVHDTVYRKTNGWIGHRTL--WIP- Mflv_2238|M.gilvum_PYR-GCK ---------MGVALWIEKNIGTRLLMLHDKLYKATDGRIGHRIPLPGVAP Mvan_4457|M.vanbaalenii_PYR-1 ---------MGVALWVEQNIGTRLLMLHDKLYKSTGGRIGHRIPLPGVAP MSMEG_5030|M.smegmatis_MC2_155 ------------MPWWERYIGLPLLLLHDKVYKATDGRIGHRIP--GGPA MAB_1980c|M.abscessus_ATCC_199 ----------------MSRLVAKVLGVHQRIYIASKGYLGHHVP--GMAP TH_0360|M.thermoresistible__bu MTAMAKSPPPNLNSPWADVFIKWMARLNTWAYRASGGRLGGTMFR---AP : :: * : * :* . Mb1292c|M.bovis_AF2122/97 SLLLHTTGAKTSQPRTTSLTYARDGDAYLIVASKGGDPRSPGWYHNLKAN Rv1261c|M.tuberculosis_H37Rv SLLLHTTGAKTSQPRTTSLTYARDGDAYLIVASKGGDPRSPGWYHNLKAN MMAR_4178|M.marinum_M SLLLHTVGAKTGQARTTSLTYARDGDSYLIVASNGGDERYPGWYHNLRKR MUL_4480|M.ulcerans_Agy99 SLLLHTVGAKTGQARTTSLTSARDGDSYLIVASNGGDERYPGWYHNLRKR MAV_1241|M.avium_104 SLLLHTVGAKTGKPRTTSLTYARDGENYLVVASKGGAPEAPGWYHNLKAK Mflv_2238|M.gilvum_PYR-GCK SLLLHTVGAKTGKRRSNTLSYFPDGGSYYVVASKGGDPRAPGWYHNLKAR Mvan_4457|M.vanbaalenii_PYR-1 SLLLHTVGAKTGKQRTNTLSYFPDGGSYYVVASKGGDPKAPGWYHNLKAH MSMEG_5030|M.smegmatis_MC2_155 TLILHTVGAKTGQHRASSLAYARDGDDYLVVASKGGEPKAPGWYHNLKAD MAB_1980c|M.abscessus_ATCC_199 NLLLTSVGAKSGARRINSLTYAHDGKDLVIVASNGGARRNPAWYHNLKAH TH_0360|M.thermoresistible__bu VALLTTTGRKTGQPRVSPLLYLRDGERIIVAASRGGSDKNPMWYLNLKAN :* :.* *:. * ..* ** :.**.** . * ** **: Mb1292c|M.bovis_AF2122/97 PDVEINVGPKRFGVTAKPVQPHDPDYARLWQIVN--ENNANRYTNYQSRT Rv1261c|M.tuberculosis_H37Rv PDVEINVGPKRFGVTAKPVQPHDPDYARLWQIVN--ENNANRYTNYQSRT MMAR_4178|M.marinum_M PDCEINVGPKRIAVTARRVTPDDADYQRMWQLVN--KNNANRYDSYQRRT MUL_4480|M.ulcerans_Agy99 PDCKINVGPKRIAVTARRVTPDDADYQRMWQLVN--KNNANRYDSYQRRT MAV_1241|M.avium_104 PEAEINVGPKRFAVTARIVPPGDADYARLWEIVN--KNNQNRYAEYQKRT Mflv_2238|M.gilvum_PYR-GCK PDIDINIGPNRFAVTATPVTADDPDYPRLWKVVN--DGNSNRYEGYQRRT Mvan_4457|M.vanbaalenii_PYR-1 PDIEINIGPKRFAVTATPVTAGDPDYPRLWKMVN--DGNSHRYDGYQKRT MSMEG_5030|M.smegmatis_MC2_155 PNVEINVGPKRLRATARAVFPDDPDFPRLWEIVNNMPGNKDRYIGYQKRT MAB_1980c|M.abscessus_ATCC_199 PDVQVQLGREKRRVHATALLPGDADYERLWKLAD--TNNSGHYSAYQRAT TH_0360|M.thermoresistible__bu PEVSVQIRREVLELTARDAT--EAERARYWPQLV---AMYPTFEDYQRWT *: .::: : * :.: * * : ** * Mb1292c|M.bovis_AF2122/97 SRPIPVVVLTRR------- Rv1261c|M.tuberculosis_H37Rv SRPIPVVVLTRR------- MMAR_4178|M.marinum_M SRPIPIFALTPAA------ MUL_4480|M.ulcerans_Agy99 SRPIPIFALTPAA------ MAV_1241|M.avium_104 SRPIPVVVLTPKS------ Mflv_2238|M.gilvum_PYR-GCK SRRIPLVRLTPKT------ Mvan_4457|M.vanbaalenii_PYR-1 SRKIPLVRLTPKP------ MSMEG_5030|M.smegmatis_MC2_155 TRQIPVIVLTPVS------ MAB_1980c|M.abscessus_ATCC_199 SRPIPIVVLAPA------- TH_0360|M.thermoresistible__bu DRVIPLVVCEPRSAANQEP * **:.