For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LRLHDASAAAPESRMHIARHEEAVNRRQMFIGITGLLLAVIGLMALWFPVYLDQYDAYGIKVTCGSGWRS NLTQALYADGNDNTQALVTRCDTALLVRRAWAIPSVALGWLLVTGFLVMWVHNDQHQGQSYPGYRA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0428c | - | - | 100% (136) | transmembrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv0420c | - | 2e-77 | 99.26% (136) | transmembrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_0731 | - | 5e-36 | 58.12% (117) | hypothetical protein MMAR_0731 |
| M. avium 104 | MAV_0112 | - | 1e-15 | 50.68% (73) | hypothetical protein MAV_0112 |
| M. smegmatis MC2 155 | MSMEG_0813 | - | 2e-13 | 33.66% (101) | hypothetical protein MSMEG_0813 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_3595 | - | 7e-34 | 59.43% (106) | hypothetical protein MUL_3595 |
| M. vanbaalenii PYR-1 | Mvan_5746 | - | 5e-06 | 29.13% (103) | hypothetical protein Mvan_5746 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0428c|M.bovis_AF2122/97 MRLHDASAAAPESRMHIARHEEAVNRRQMFIGITGLLLAVIGLMALWFPV
Rv0420c|M.tuberculosis_H37Rv MRLHDASAAAPESRMHIARHGEAVNRRQMFIGITGLLLAVIGLMALWFPV
MMAR_0731|M.marinum_M ------MTPTAGSGIHIESRGEAVTHRQLYLGIAGVVVGIIGLFALWLPV
MUL_3595|M.ulcerans_Agy99 -----------------------MTHRQLYLGIAGVVVGIIGLFALWLPV
MSMEG_0813|M.smegmatis_MC2_155 -----------------------MSYRAVYLGIAGAIVLAIGLYLMSMTV
MAV_0112|M.avium_104 ------------------------MHRGPLIVFAAVVCLAGGLLALRFPV
Mvan_5746|M.vanbaalenii_PYR-1 ------------------------MNMRRLIMIAGVAVLLAGVIALLVPV
: ::. *: : ..*
Mb0428c|M.bovis_AF2122/97 YLDQYDAYGIKVTCGSGWRSNLTQALYADGNDNT-----------QALVT
Rv0420c|M.tuberculosis_H37Rv YLDQYDAYGIKVTCGSGWRSNLTQALYADGNDNT-----------QALVT
MMAR_0731|M.marinum_M YLDHYDLYGMKVSCGRGFTSDLTQATQGGGG---------------ALVD
MUL_3595|M.ulcerans_Agy99 YLDHYDLYGMKVSCGRGFTSDLTQATQGGGG---------------ALVD
MSMEG_0813|M.smegmatis_MC2_155 YLDDFDRYGMQIPCGTAFSEHLVQAEAAGAE----------------YVD
MAV_0112|M.avium_104 FIDAYDQFGLQVKCGSGFTTELTQASSAVGPAG------------TNYVD
Mvan_5746|M.vanbaalenii_PYR-1 SVPGPDGS---IGCGNGIAADLSQARDADSGNLANLPVLNEIVPHTDYAA
: * : ** . .* ** . . .
Mb0428c|M.bovis_AF2122/97 RCDTALLVRRAWAIPSVALGWLLVTGFLVMWVHNDQHQGQSYPGYRA---
Rv0420c|M.tuberculosis_H37Rv RCDTALLVRRAWAIPSVALGWLLVTGFLVMWVHNDQHQGQSYPGYRA---
MMAR_0731|M.marinum_M QCDSALLFRRAWAIPAVAIGWLLVTAFLVSWVHHGQREEQLS--------
MUL_3595|M.ulcerans_Agy99 QCDSALLFRRAWAIPAVAIGWLLVTAFLVSWVHHGQREEQLS--------
MSMEG_0813|M.smegmatis_MC2_155 KCGSALMTRRLWTMPVVAVGALALIAVLLRAATSSAHESLIPKRDSH---
MAV_0112|M.avium_104 QCGSALMVRRLWAIPTAVLGGMALTWQAAAALAHDHRRPAPSQSAAQSPS
Mvan_5746|M.vanbaalenii_PYR-1 ACESALSSRRSWAIPVAVVGLVVLAGSFFVGGRTARARA-----------
* :** ** *::* ..:* : : .