For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VPYIDLNADLGEGFGIWQLGDDDAMLGIVTSANVACGFHAGEPAGLLRVCRAAAERGVRIGAQVGYRDLA GFGRRFIDVDPEDLVAEVVYQIGALQAIAQSCGSTVSYVKPHGALYNTIVTHRDQAAAVAEAVRMVDATL PVLGMTGSVFFQQATDLGLRTVAEAFADRAYRSDGQLVSRREHGAVLADAAAIAQRAVSMVASGKVTAVD GTQVPITMESICVHGDSPGAMQIATAVRDRLTAAGNEIRAFC
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_4152 | lamB | - | 100% (252) | LamB/YcsF family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_1451 | - | 1e-100 | 71.71% (251) | hypothetical protein Mflv_1451 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | MLBr_00333 | - | 1e-111 | 77.51% (249) | LamB/YcsF family protein |
M. abscessus ATCC 19977 | MAB_0574c | - | 2e-79 | 62.90% (248) | hypothetical protein MAB_0574c |
M. marinum M | MMAR_5076 | lamB | 1e-140 | 99.21% (252) | lactam utilization protein LamB |
M. avium 104 | MAV_0580 | - | 1e-111 | 79.52% (249) | hypothetical protein MAV_0580 |
M. smegmatis MC2 155 | MSMEG_6054 | - | 1e-100 | 72.98% (248) | hypothetical protein MSMEG_6054 |
M. thermoresistible (build 8) | TH_1751 | - | 1e-97 | 68.13% (251) | LamB/YcsF |
M. vanbaalenii PYR-1 | Mvan_5327 | - | 1e-102 | 74.19% (248) | hypothetical protein Mvan_5327 |
CLUSTAL 2.0.9 multiple sequence alignment MUL_4152|M.ulcerans_Agy99 MP--YIDLNADLGEGFGIWQLGDDDAMLGIVTSANVACGFHAGEPAGLLR MMAR_5076|M.marinum_M MP--YIDLNADLGEGFGIWQLGDDDAMLGIVTSANVACGFHAGEPAGLLR MLBr_00333|M.leprae_Br4923 MA--CIDLNADLGEGFGVWRLGDDEAMLRIVTSANVACGFHAGDPAGLLR MAV_0580|M.avium_104 MA--GIDLNADLGEGFGVWRLGDDDAMLGIVSSANVACGFHAGDPAGLLR MSMEG_6054|M.smegmatis_MC2_155 MPS-TVDLNADLGESFGVWQLGDDEAMLGLVTSANVACGFHAGDPALLLR TH_1751|M.thermoresistible__bu VP--TVDLNADLGESFGVWRLGDDEAMLDVITSANVACGFHAGDPAGLIT Mflv_1451|M.gilvum_PYR-GCK MS--SVDLNADLGEGFGVWALGDDDAMLDIVTSANVACGFHAGDPATLRR Mvan_5327|M.vanbaalenii_PYR-1 MTTVSVDLNADLGEGFGVWTLGDDDAMLDIVTSANVACGFHAGDPATLVR MAB_0574c|M.abscessus_ATCC_199 MA--SIDLNADLGEGFGAWRLGDDDAMLDVVTSANLACGFHAGDPATLHR :. :********.** * ****:*** :::***:*******:** * MUL_4152|M.ulcerans_Agy99 VCRAAAERGVRIGAQVGYRDLAGFGRRFIDVDPEDLVAEVVYQIGALQAI MMAR_5076|M.marinum_M VCRAAAERGVRIGAQVGYRDLAGFGRRFIDVDPEDLVAEVVYQIGALQAI MLBr_00333|M.leprae_Br4923 VCRLAAERGVRIGAQVSYRDLVGFGRRFIDVTADDLLADVVYQIGALQAI MAV_0580|M.avium_104 VCRSAAERGVRVGAQVSYRDLAGFGRRFIDVAADELLADVVYQIGALQAI MSMEG_6054|M.smegmatis_MC2_155 TCRTAAQRGVAIGAQVSYRDLAGFGRRFIEVDPTDLEAEIIYQIGALQAI TH_1751|M.thermoresistible__bu TCRAAAERGVRIGAQVSYRDLAGFGRRFVDADPRDLTADVIYQIGALQAI Mflv_1451|M.gilvum_PYR-GCK VCEAAAARGVRIGAQVSYRDLAGFGRRFIDVSSEDLIADVMYQIGALSAL Mvan_5327|M.vanbaalenii_PYR-1 VCRAAAARGVRIGAQVSYRDLAGFGRRFIDVSAEDLVADVMYQIGALSTL MAB_0574c|M.abscessus_ATCC_199 TCHAAATRDIRIGAQVGYRDLAGFGRRFIDIAAADLYADVVYQIGALDAL .*. ** *.: :****.****.******:: . :* *:::******.:: MUL_4152|M.ulcerans_Agy99 AQSCGSTVSYVKPHGALYNTIVTHRDQAAAVAEAVRMVDATLPVLGMTGS MMAR_5076|M.marinum_M AQSCGSTVSYVKPHGALYNTIVTHRDQAAAVAEAVQMVDATLPVLGMTGS MLBr_00333|M.leprae_Br4923 AQTAGSAVSYVKPHGALYNTIVTNREQGAAVAAAIQLVDSTLPVLGLAGS MAV_0580|M.avium_104 AHAAGSSVCYVKPHGALYNTIVTHPAQAAAVAEAVRLVDPGLPVLGMAGS MSMEG_6054|M.smegmatis_MC2_155 AHVAGSGVGYVKPHGALYNTIVGHEEQAAAVAAAVHAVDPALPVLGLPGS TH_1751|M.thermoresistible__bu AKAAGTRVSYVKPHGALYHSLLSNHAQARAVAEAVHTVDPELPVLSLYGS Mflv_1451|M.gilvum_PYR-GCK AAAAGSSVSYVKPHGALYNAVVTNRLQAHALAAAVHAVDPALPVLGLAGS Mvan_5327|M.vanbaalenii_PYR-1 AAVAGSSVSYVKPHGALYNAITTNHLQAHAVAEAVHTVDPTLPVLGLAGS MAB_0574c|M.abscessus_ATCC_199 ARTAGSRVSYVKPHGALYNTIIHHEAQADAVARAVRDFNADLPVLTLPHG * .*: * *********::: : *. *:* *:: .:. **** : . MUL_4152|M.ulcerans_Agy99 VFFQQATDLGLRTVAEAFADRAYRSDGQLVSRREHGAVLADAAAIAQRAV MMAR_5076|M.marinum_M VFFQQATDLGLRTVAEAFADRAYRSDGQLVSRREHGAVLADAAAIAQRAV MLBr_00333|M.leprae_Br4923 TFFDEAARIGLRTVAEAFADRTYRPDGQLISRREPGAVLHDPAVIAQRVV MAV_0580|M.avium_104 VFFDEAARRGLRVVAEAFADRAYRPDGRLVSRREPGAVLADPAAIAERVL MSMEG_6054|M.smegmatis_MC2_155 AFFAEARRLGLRTVSEAFADRAYRSDGTLVSRREPGAVLHDPHEIAERVA TH_1751|M.thermoresistible__bu VFFAEAHRLGLRTVPEAFADRAYRPDGKLLDRKLRGALLHDEAEIAERVA Mflv_1451|M.gilvum_PYR-GCK VFFGAAEELGLRTVPEAFADRAYRPDGRLVSRRERNSVLHDVDEIAERVI Mvan_5327|M.vanbaalenii_PYR-1 VFFTAATELGLRTVPEAFADRAYRPDGQLVSRRERNAVLRDVDEIVDRVI MAB_0574c|M.abscessus_ATCC_199 VFGDRARTLGLRVVTEAFADRAYLDDGTLVPRSESGAVLHDPDAVAARIP .* * ***.*.******:* ** *: * .::* * :. * MUL_4152|M.ulcerans_Agy99 SMVASGKVTAVDGTQVPITMESICVHGDSPGAMQIATAVRDRLTAAGNEI MMAR_5076|M.marinum_M SMVASGKVTAVDGTQVPITMESICVHGDSPGAVQIATAVRDRLTAAGNEI MLBr_00333|M.leprae_Br4923 TMVTTGKATAVDGTQLAVTVESICLHGDSPNAIQMATAVRDQLNAAGIDI MAV_0580|M.avium_104 AMVETGAVTAVDGTRLALSVESVCVHGDSPGAVQIATAVRDRLRAAGVEI MSMEG_6054|M.smegmatis_MC2_155 AMVTDGRVTAVDGTVIDITVESVCVHGDSPGAVRIAKAVRERLEAEPVEL TH_1751|M.thermoresistible__bu MMVTTGRVVAVDGSTIPITVESICVHGDTAGAVAIAYAVRDRLRREGVEL Mflv_1451|M.gilvum_PYR-GCK SMVSRGRVHAVDGSTIPITVESVCVHGDSPGAVQIATAVRKRLVAEGVTL Mvan_5327|M.vanbaalenii_PYR-1 SMVTTGRVAAVDGSTIPITVESVCVHGDSPGAVQIATAVRERLIADGVTL MAB_0574c|M.abscessus_ATCC_199 ALSR--------------TAESICVHGDSPGAVTIARTVRAALAASEIEV : : **:*:***:..*: :* :** * : MUL_4152|M.ulcerans_Agy99 RAFC-------- MMAR_5076|M.marinum_M RAFC-------- MLBr_00333|M.leprae_Br4923 RAFC-------- MAV_0580|M.avium_104 RAFC-------- MSMEG_6054|M.smegmatis_MC2_155 ASFTGARSETGR TH_1751|M.thermoresistible__bu AAFT-------- Mflv_1451|M.gilvum_PYR-GCK ASFS-------- Mvan_5327|M.vanbaalenii_PYR-1 APFS-------- MAB_0574c|M.abscessus_ATCC_199 APFV-------- .*