For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RKLLPVTGNSGSVLASLVPLALVIAVSPITIIPAVLVLHAPRPRPTGLAFLGGWVLGLIAVTAMFVAGSE LFGGLRRSPPAWASWARIVVGSLLILFGIYRWLNRHGEVESPRWMRSFATITPRRAGITAAVLVLVRPEV VIICLAAGLAIGTGGLGVAMRWVCGAIFVAISASTVAGPILAFVGAGDRLEDSLDRLKEWMEKNHAGMLA AVLILIGVMVLYNGIHAL*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_4034 | - | - | 100% (229) | hypothetical protein MUL_4034 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3511c | - | 2e-87 | 65.50% (229) | integral membrane protein |
| M. gilvum PYR-GCK | Mflv_0252 | - | 1e-69 | 56.05% (223) | hypothetical protein Mflv_0252 |
| M. tuberculosis H37Rv | Rv3481c | - | 2e-87 | 65.50% (229) | integral membrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0758 | - | 3e-17 | 70.69% (58) | hypothetical protein MAB_0758 |
| M. marinum M | MMAR_4961 | - | 1e-128 | 100.00% (229) | hypothetical protein MMAR_4961 |
| M. avium 104 | MAV_4839 | - | 1e-78 | 61.88% (223) | hypothetical protein MAV_4839 |
| M. smegmatis MC2 155 | MSMEG_0729 | - | 3e-72 | 56.05% (223) | hypothetical protein MSMEG_0729 |
| M. thermoresistible (build 8) | TH_2356 | - | 1e-72 | 58.74% (223) | conserved hypothetical protein |
| M. vanbaalenii PYR-1 | Mvan_0642 | - | 8e-69 | 56.05% (223) | hypothetical protein Mvan_0642 |
CLUSTAL 2.0.9 multiple sequence alignment
MUL_4034|M.ulcerans_Agy99 MRKLLPVTGNSGSVLASLVPLALVIAVSPITIIPAVLVLHAPRPRPTGLA
MMAR_4961|M.marinum_M MRKLLPVTGNSGSVLASLVPLALVIAVSPITIIPAVLVLHAPRPRPTGLA
MAB_0758|M.abscessus_ATCC_1997 --------------------------------------------------
MAV_4839|M.avium_104 ------MAGSWGTVLTGLVPLGLVISLSPLTVIPAVLVLQAPRPRPSSLA
Mb3511c|M.bovis_AF2122/97 MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLA
Rv3481c|M.tuberculosis_H37Rv MRGLLPVAGHWVSVLTGLVPLALVIALSPLSVIPAVLVVHSPQPRPSSLA
Mflv_0252|M.gilvum_PYR-GCK ------MPGTWGSILIELIPLALVIALSPLSIIPAVLVLSAARPRPTGLA
Mvan_0642|M.vanbaalenii_PYR-1 ------MPGSWGPILTELIPLALVIALSPLSIIPAVLVLHSPRPRPTGLA
MSMEG_0729|M.smegmatis_MC2_155 ------MTGIWSSVLTELIPLAMVVALSPLSIIPAVLVLQTPRPRPTGLA
TH_2356|M.thermoresistible__bu ------MTGSWASLLTELIPLALVIALSPLSIIPGVLVLHTPRPRPTGLA
MUL_4034|M.ulcerans_Agy99 FLGGWVLGLIAVTAMFVAGSELFGGLRRSPPAWASWARIVVGSLLILFGI
MMAR_4961|M.marinum_M FLGGWVLGLIAVTAMFVAGSELFGGLRRSPPAWASWARIVVGSLLILFGI
MAB_0758|M.abscessus_ATCC_1997 --------------------------------------------------
MAV_4839|M.avium_104 FLGGWLLSLAALTALAVAASHLLGGLDRSPPRWSSWLRVVLGAGLIGYGI
Mb3511c|M.bovis_AF2122/97 FLGGWLLGLAVVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGV
Rv3481c|M.tuberculosis_H37Rv FLGGWLLGLAVVTAVFVAASGALGGLSTTSPAWASWLRVVLGSALIVFGV
Mflv_0252|M.gilvum_PYR-GCK FLAGWVLGLAALTAVFLQLSDLVGGIGTKPPSWASWLRIVVGVLLILWGA
Mvan_0642|M.vanbaalenii_PYR-1 FLVGWLVGLAALTAIFLQLSDLVGGIGTQPPSWASWLRIVVGVGLIGFGG
MSMEG_0729|M.smegmatis_MC2_155 FLGGWLVGMAALTALFIEVSNLFGRLD-KPPVWASWLRIVLGTALIIFGV
TH_2356|M.thermoresistible__bu FLLGWLIGLAVLAAAFVALSGLLGGGLEHPPGWASWLRVVIGALLIVFGG
MUL_4034|M.ulcerans_Agy99 YRWLNRHGEVESPRWMRSFATITPRRAGITAAVLVLVRPEVVIICLAAGL
MMAR_4961|M.marinum_M YRWLNRHGEVESPRWMRSFATITPRRAGITAAVLVLVRPEVVIICLAAGL
MAB_0758|M.abscessus_ATCC_1997 --------------------------------------------------
MAV_4839|M.avium_104 FRWQTRHRHSESPAWMRSFASITPARAGITGAVLAVVRPDVALICVPAGL
Mb3511c|M.bovis_AF2122/97 LRWLTRHRHTEMPGWMRAFASFTPARAGLVGAVLVVVRPEVLIICAAAGL
Rv3481c|M.tuberculosis_H37Rv LRWLTRHRHTEMPGWMRAFASFTPARAGLVGAVLVVVRPEVLIICAAAGL
Mflv_0252|M.gilvum_PYR-GCK YRWLKRASSEHMPGWMTRISALTPAKAAATAAALTVLNVKVLFICAAAGL
Mvan_0642|M.vanbaalenii_PYR-1 YRWVTRKKSEHMPGWMTRMSTLTPAKAGATAAALTVLNPKVLFICAAAGL
MSMEG_0729|M.smegmatis_MC2_155 YRWLNRSKAAHTPKWMQSMGKLTPPRAGVTGVVLTIVNPKVLFICAAAGL
TH_2356|M.thermoresistible__bu YRWATRHRSTEMPRWMRSLTTASPPRAAITAAVLTVANPKVLFICAAAGL
MUL_4034|M.ulcerans_Agy99 AIGTGGLGVAMRWVCGAIFVAISASTVAGPILAFVGAGDRLEDSLDRLKE
MMAR_4961|M.marinum_M AIGTGGLGVAMRWVCGAIFVAISASTVAGPILAFVGAGDRLEDSLDRLKE
MAB_0758|M.abscessus_ATCC_1997 ---------------------MISASVAVPILAYVAAGHRLDDAMRRLKD
MAV_4839|M.avium_104 AIGSSGLGPIGDWMAALFFVAVAASSVAIPILAYLAAGSRLDDALARLRD
Mb3511c|M.bovis_AF2122/97 AIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDSLERLKD
Rv3481c|M.tuberculosis_H37Rv AIGSGGHGAAGSWIYTAFFAMLAASTVAIPILAYVAAGDRLDDSLERLKD
Mflv_0252|M.gilvum_PYR-GCK AIGSSGLDTPTVWAAVLWFVLVAASTVAAPIVAYAISGERLDPTLNRVQA
Mvan_0642|M.vanbaalenii_PYR-1 AIGSAGLDSPTVWGAMIWFVAIAGLTVALPVLGYAVSGERLDPTLNRLKA
MSMEG_0729|M.smegmatis_MC2_155 AIGSAGLGQPQVWAAAIWFVVFASSTVALPILAYAVSGSKLDPTLARLGE
TH_2356|M.thermoresistible__bu AIGTAGVGVG-AWPAVLYYVLVAGSTVALPILAYALAPDRLGQPLERLRE
. . :** *::.: : :* .: *:
MUL_4034|M.ulcerans_Agy99 WMEKNHAGMLAAVLILIGVMVLYNGIHAL--
MMAR_4961|M.marinum_M WMEKNHAGMLAAVLILIGVMVLYNGIHAL--
MAB_0758|M.abscessus_ATCC_1997 WMDKNNAALMAAILIVIGVMVLYNGIHALR-
MAV_4839|M.avium_104 WMDRNNAALLAAVLVVIGAMVLYHGIDAL--
Mb3511c|M.bovis_AF2122/97 WMEKNHAGMVAAILVVIGLLLLYNGVHAM--
Rv3481c|M.tuberculosis_H37Rv WMEKNHAGMVAAILVVIGLLLLYNGVHAM--
Mflv_0252|M.gilvum_PYR-GCK WMERQHATLIAAILVVIGLLVLYKGIHALAG
Mvan_0642|M.vanbaalenii_PYR-1 WMERQHAVLVAAILVAIGLLVLYKGIHALIG
MSMEG_0729|M.smegmatis_MC2_155 WMERQHAVLVAVILVVIGLLVLYKGLHAL--
TH_2356|M.thermoresistible__bu WMERQHGALVAAILVVIGLMVLFKGIHAL--
**::::. ::*.:*: ** ::*::*:.*: