For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TERTLVLIKPDGVQRLLVGEIISRIERKGLAIAALELRNVTEELASQHYAEHEGKPFFGSLLEFITSAPV VAAIVEGPRAIAAFRQLAGGTDPVEKATPGTIRGDFGLETQFNLVHGSDSAESAQREIALWFPSA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_3716 | ndk | - | 100% (136) | nucleoside diphosphate kinase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2472c | ndk | 7e-64 | 87.50% (136) | nucleoside diphosphate kinase |
| M. gilvum PYR-GCK | Mflv_2633 | ndk | 2e-61 | 85.07% (134) | nucleoside diphosphate kinase |
| M. tuberculosis H37Rv | Rv2445c | ndk | 7e-64 | 87.50% (136) | nucleoside diphosphate kinase |
| M. leprae Br4923 | MLBr_01469 | ndk | 2e-62 | 86.57% (134) | nucleoside diphosphate kinase |
| M. abscessus ATCC 19977 | MAB_1606 | ndk | 4e-57 | 78.52% (135) | nucleoside diphosphate kinase |
| M. marinum M | MMAR_3769 | ndk | 6e-72 | 99.26% (136) | nucleoside diphosphate kinase NdkA |
| M. avium 104 | MAV_1727 | ndk | 4e-65 | 88.24% (136) | nucleoside diphosphate kinase |
| M. smegmatis MC2 155 | MSMEG_4627 | ndk | 2e-60 | 83.58% (134) | nucleoside diphosphate kinase |
| M. thermoresistible (build 8) | TH_0611 | ndkA | 2e-64 | 89.55% (134) | PROBABLE NUCLEOSIDE DIPHOSPHATE KINASE NDKA (NDK) (NDP |
| M. vanbaalenii PYR-1 | Mvan_3948 | ndk | 7e-62 | 85.82% (134) | nucleoside diphosphate kinase |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2633|M.gilvum_PYR-GCK -------MTERTLVLIKPDGVQRRLIGEIISRIEAKGLAIVALELKNVGD
Mvan_3948|M.vanbaalenii_PYR-1 -------MTERTLVLIKPDGVQRRLIGEIISRIEAKGLTVAALELKNVDD
MUL_3716|M.ulcerans_Agy99 -------MTERTLVLIKPDGVQRLLVGEIISRIERKGLAIAALELRNVTE
MMAR_3769|M.marinum_M -------MTERTLVLIKPDGVQRQLVGEIISRIERKGLAIAALELRNVTE
Mb2472c|M.bovis_AF2122/97 -------MTERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSA
Rv2445c|M.tuberculosis_H37Rv -------MTERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSA
MLBr_01469|M.leprae_Br4923 -------MTERTLVLIKPDAVERQLIGEIISRIERKGLTIAALELRQVGE
MAV_1727|M.avium_104 -------MTERTLVLIKPDGVQRQLVGEIIGRIERKGLTLVALELRHVSQ
TH_0611|M.thermoresistible__bu VTGTLSAVTERTLVLIKPDGVQRRLVGEILSRIERKGLTIAALELRTVSD
MAB_1606|M.abscessus_ATCC_1997 -------MTERTLVLIKPDGVRRGLVGEVLNRIERKGLTLAALELKNVDD
MSMEG_4627|M.smegmatis_MC2_155 -------MTERTLVLIKPDGVKRQLVGEILSRIERKGLTLAALELKNVSD
:***********.:.* *:**::.*** ***::.**:*: *
Mflv_2633|M.gilvum_PYR-GCK DTARAHYAEHEGKPFFASLLEFITSGPVVAAVLEGPRAIAAFRQLAGGTD
Mvan_3948|M.vanbaalenii_PYR-1 ALARAHYAEHEGKPFFASLLEFITSGPVVAAILEGPRAIAAFRQLAGGTD
MUL_3716|M.ulcerans_Agy99 ELASQHYAEHEGKPFFGSLLEFITSAPVVAAIVEGPRAIAAFRQLAGGTD
MMAR_3769|M.marinum_M ELASQHYAEHEGKPFFGSLLEFITSAPVVAAIVEGPRAIAAFRQLAGGTD
Mb2472c|M.bovis_AF2122/97 ELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTD
Rv2445c|M.tuberculosis_H37Rv ELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTD
MLBr_01469|M.leprae_Br4923 ELASQHYAEHESKPFFGSLLEFITSGPVMAAIVEGPRAVAAVRQLTGGTD
MAV_1727|M.avium_104 DLAAQHYAEHEGKPFFASLLEFITSGPVVAAIVEGPRAIAAFRQLAGGTD
TH_0611|M.thermoresistible__bu ELARRHYAEHDGKPFFDSLLEFITSGPVVAAIVEGPRAIAAFRQLAGGTD
MAB_1606|M.abscessus_ATCC_1997 ATARAHYAEHAEKPFFGSLLEFITSGPLVAAVLEGPRAIAAFRQIAGGTD
MSMEG_4627|M.smegmatis_MC2_155 DLARQHYAEHADKPFFGSLLEFITSGPLVAAIVEGPRAVAAFRQIAGGTD
* ***** **** ********.*::**::**.**:**.**::****
Mflv_2633|M.gilvum_PYR-GCK PVEKAIPGTIRGDLGLETQFNLVHGSDSPDSAAREIALWFPGL---
Mvan_3948|M.vanbaalenii_PYR-1 PVEKATPGTIRGDLGLETQFNLVHGSDSPDSAAREIELWFPGR---
MUL_3716|M.ulcerans_Agy99 PVEKATPGTIRGDFGLETQFNLVHGSDSAESAQREIALWFPSA---
MMAR_3769|M.marinum_M PVEKATPGTIRGDFGLETQFNLVHGSDSAESAQREIALWFPSA---
Mb2472c|M.bovis_AF2122/97 PVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFPGA---
Rv2445c|M.tuberculosis_H37Rv PVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFPGA---
MLBr_01469|M.leprae_Br4923 PVEKAAPGTIRGDLALETQFNLVHGSDSTASAQREIALWFPGI---
MAV_1727|M.avium_104 PVEKAIPGTIRGDFGLETQFNLVHGSDSVESAKREIALWFPDA---
TH_0611|M.thermoresistible__bu PVEKATPGTIRGDFGLETQFNLVHGSDSPESAAREIELWFPGR---
MAB_1606|M.abscessus_ATCC_1997 PVEKAATGSIRGDFALETQENLVHGSDSPESAAREIALWFPAL---
MSMEG_4627|M.smegmatis_MC2_155 PVEKAVPGTIRGDFALITQDNLVHGSDSPESAAREIALWFPGEATA
**: * .*:****:.* ** ******** ** *** ****