For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VIRVSPIAHLAVGFATLGLLIPVLAWPPSAPLLLLPVLVSALIIRVRTVADENGVTARTLLGSTTVAWDD IEGLRFNRGSWARAQLRNGGELRLPAVTFATLPQLTEASSGRVPNPYR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_1945 | cfp6 | - | 100% (119) | low molecular weight protein antigen 6, Cfp6 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3029 | cfp6 | 1e-46 | 76.79% (112) | low molecular weight protein antigen 6 (CFP-6) |
| M. gilvum PYR-GCK | Mflv_4240 | - | 2e-34 | 63.03% (119) | hypothetical protein Mflv_4240 |
| M. tuberculosis H37Rv | Rv3004 | cfp6 | 1e-46 | 76.79% (112) | low molecular weight protein antigen 6 (CFP-6) |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3324 | - | 1e-29 | 52.14% (117) | hypothetical protein MAB_3324 |
| M. marinum M | MMAR_1708 | cfp6 | 3e-63 | 99.16% (119) | low molecular weight protein antigen 6, Cfp6 |
| M. avium 104 | MAV_3853 | - | 5e-51 | 80.00% (115) | low molecular weight protein antigen 6 |
| M. smegmatis MC2 155 | MSMEG_2371 | - | 6e-37 | 65.55% (119) | low molecular weight protein antigen 6 |
| M. thermoresistible (build 8) | TH_0062 | - | 1e-37 | 63.56% (118) | LOW MOLECULAR WEIGHT PROTEIN ANTIGEN 6 (CFP-6) |
| M. vanbaalenii PYR-1 | Mvan_2121 | - | 1e-31 | 59.82% (112) | low molecular weight protein antigen 6 (CFP-6) |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4240|M.gilvum_PYR-GCK MRLCYARIRASAASTREPITTSRVCIADDGSRRTGPRSNPGPGRPAHPPG
Mvan_2121|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb3029|M.bovis_AF2122/97 --------------------------------------------------
Rv3004|M.tuberculosis_H37Rv --------------------------------------------------
MUL_1945|M.ulcerans_Agy99 --------------------------------------------------
MMAR_1708|M.marinum_M --------------------------------------------------
MAV_3853|M.avium_104 --------------------------------------------------
TH_0062|M.thermoresistible__bu ----------------------------------------VGREDEEHGT
MSMEG_2371|M.smegmatis_MC2_155 --------------------------------------------------
MAB_3324|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_4240|M.gilvum_PYR-GCK PRCDDGDMRSSSAPESAPVVIRISPMAHVAVGFLTVALLAVVLAGPIWFL
Mvan_2121|M.vanbaalenii_PYR-1 -------------------------MAHVAIGFLSVALLAVVFAGPAWFI
Mb3029|M.bovis_AF2122/97 -------------------------MAHFAVGFLTLGLLVPVLTWP-VSA
Rv3004|M.tuberculosis_H37Rv -------------------------MAHFAVGFLTLGLLVPVLTWP-VSA
MUL_1945|M.ulcerans_Agy99 ------------------MVIRVSPIAHLAVGFATLGLLIPVLAWP-PSA
MMAR_1708|M.marinum_M ------------MTTQTAVVIRVSPIAHLAVGFATLGLLIPVLAWP-PSA
MAV_3853|M.avium_104 ----------------------MSPVAHLAVGFLTLGLLIPVMLWP-PSA
TH_0062|M.thermoresistible__bu PEHGDRTGDGGRSLHTAPVTIHISPMAHLGVAIVALGMVPLVGAVP-ILA
MSMEG_2371|M.smegmatis_MC2_155 ---------MSARSATDPVVIRISPMAHLAVAVVTLGLLTVILTNPPLFG
MAB_3324|M.abscessus_ATCC_1997 ------------MAEAKRTVIRTSPMAHFVTGFLALGMLSFVLALP-ILA
:**. .. ::.:: : *
Mflv_4240|M.gilvum_PYR-GCK LLFLIPAGVSYAVARYRTVADRDTVTARTLFGKQTVRWEDIHGLRFGRQA
Mvan_2121|M.vanbaalenii_PYR-1 LLFLIPLLLSIFVMRYRTVADRDTVTARTMLRSKTVRWDDIDGLRFGRTA
Mb3029|M.bovis_AF2122/97 PLLVIPVALSASIIRLRTLADERGVTVRTLVGSRAVRWDDIDGLRFHRGS
Rv3004|M.tuberculosis_H37Rv PLLVIPVALSASIIRLRTLADERGVTVRTLVGSRAVRWDDIDGLRFHRGS
MUL_1945|M.ulcerans_Agy99 PLLLLPVLVSALIIRVRTVADENGVTARTLLGSTTVAWDDIEGLRFNRGS
MMAR_1708|M.marinum_M PLLLLPVLVSALIIRLRTVADENGVTARTLLGSTTVAWDDIEGLRFNRGS
MAV_3853|M.avium_104 PLLLLPVLLSALIVRLRTVADDHGVTVRTLLDSRTVRWDDIDGLRFHRGS
TH_0062|M.thermoresistible__bu PLWLIPVLLSVAIVRYRTVADRAGVMVRTLVGNRTLPWDTIEGLRFGRGS
MSMEG_2371|M.smegmatis_MC2_155 VLLLIPIGLSLAIIRLQTKADRNTVTARSLLGSQTVPWSDIEGLRFERGR
MAB_3324|M.abscessus_ATCC_1997 PLLLIPIGLSYAIARYRTAVNAESAQIRTLTSTKTVPWSQIEGLTFDKHA
* ::* :* : * :* .: . *:: . :: *. *.** * :
Mflv_4240|M.gilvum_PYR-GCK WAVARRRDGSELTLPGVTFATLPVLTAASGGRVPNPYE-----
Mvan_2121|M.vanbaalenii_PYR-1 WAVAQRRDGTELSLPAVTFSTLPRLAAASGGRVPNPYE-----
Mb3029|M.bovis_AF2122/97 WARATLKDGTELRLPAVTFATLPHLTEASSGRVPNPYR-----
Rv3004|M.tuberculosis_H37Rv WARATLKDGTELRLPAVTFATLPHLTEASSGRVPNPYR-----
MUL_1945|M.ulcerans_Agy99 WARAQLRNGGELRLPAVTFATLPQLTEASSGRVPNPYR-----
MMAR_1708|M.marinum_M WARAQLRNGGELRLPAVTFATLPQLTEASSGRVPNPYR-----
MAV_3853|M.avium_104 WARARLKSGDELRLPAVTFATLPELTRASAGRVPNPYQ-----
TH_0062|M.thermoresistible__bu WAIAHCRDGGQVRLPAVTFATLPLLTEASGGRVPNPYDRD---
MSMEG_2371|M.smegmatis_MC2_155 WAVAQRTTGEDLRLPAVTFATLPLLAEVSGGRVPNPYA-----
MAB_3324|M.abscessus_ATCC_1997 WAQAKLTDGSTIRFPGVTFSTLPILSAASNGRVPNPYEGVRRD
** * * : :*.***:*** *: .* *******