For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GARRPANPFPPAAPSPRSPVSWWADPPRDLPRSPQVIARPNRQEEGNWWDRWRHRGAAPTEEGPIVYARS TTIQAQPLSVDIGIAHVRDVVMPALQAIDGYVGLSLLVDRQSGTCIATSAWETLQAMRSRAPAVAPIRDR AAMMFSDNARVEEWDIAMLHRDHRSRQGACVRATWLKVVPDQIERSLDFYGMYVLPELEGLDGFCSASLM VDHPACRRAVSCATFDTMEAMARNRDQASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_1752 | - | - | 100% (273) | hypothetical protein MUL_1752 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2588 | - | 1e-100 | 83.49% (218) | hypothetical protein Mb2588 |
| M. gilvum PYR-GCK | Mflv_4652 | - | 2e-56 | 48.61% (216) | hypothetical protein Mflv_4652 |
| M. tuberculosis H37Rv | Rv2558 | - | 1e-100 | 83.49% (218) | hypothetical protein Rv2558 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_2168 | - | 1e-140 | 99.19% (246) | hypothetical protein MMAR_2168 |
| M. avium 104 | MAV_3433 | - | 9e-98 | 84.06% (207) | hypothetical protein MAV_3433 |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_0116 | - | 1e-64 | 62.31% (199) | CONSERVED HYPOTHETICAL PROTEIN |
| M. vanbaalenii PYR-1 | Mvan_4767 | - | 1e-55 | 50.72% (207) | hypothetical protein Mvan_4767 |
CLUSTAL 2.0.9 multiple sequence alignment
MUL_1752|M.ulcerans_Agy99 MGARRPANPFPPAAPSPRSPVSWWADPPRDLPRSPQVIARPNRQEEGNWW
MMAR_2168|M.marinum_M MGG-----------------------SPRDLPRSPQVIARPNRQEEGNWW
Mb2588|M.bovis_AF2122/97 ------------------------------MPGS-----AGWRKVFG---
Rv2558|M.tuberculosis_H37Rv ------------------------------MPGS-----AGWRKVFG---
MAV_3433|M.avium_104 --------------------------------------------------
TH_0116|M.thermoresistible__bu --------------------------------------------------
Mflv_4652|M.gilvum_PYR-GCK -------------------------------------------------M
Mvan_4767|M.vanbaalenii_PYR-1 --------------------------------------------------
MUL_1752|M.ulcerans_Agy99 DRWRHRGAAP-TEEGPIVYARSTTIQAQPLSVDIGIAHVRDVVMPALQAI
MMAR_2168|M.marinum_M DRWRHRGAAP-TEEGPIVYARSTTIQAQPLSVDIGIAHVRDVVMPALQAI
Mb2588|M.bovis_AF2122/97 GTGGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEI
Rv2558|M.tuberculosis_H37Rv GTGGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEI
MAV_3433|M.avium_104 -----------------MYARSTTIQAQPLSIDIGIAHVRDVVMPALTEI
TH_0116|M.thermoresistible__bu -------------------------MARPSCIDAGIAHIRDEVMPQLSLQ
Mflv_4652|M.gilvum_PYR-GCK RTSGGAAGTLPRPTEADMYARSSTVHARSSAVDAGITYIHDTVWPGLTEL
Mvan_4767|M.vanbaalenii_PYR-1 -----------------MYARTTTVWGRPSSIDDGIANMRGSVMPELQRM
.:. .:* **: ::. * * *
MUL_1752|M.ulcerans_Agy99 DGYVGLSLLVDRQSGTCIATSAWETLQAMRSRAPAVAPIRDRAAMMFSD-
MMAR_2168|M.marinum_M DGYVGLSLLVDRQSGTCIATSAWETLQAMRSSAPAVAPIRDRAAMMFSG-
Mb2588|M.bovis_AF2122/97 DGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAG-
Rv2558|M.tuberculosis_H37Rv DGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAG-
MAV_3433|M.avium_104 DGCVGLSLLVDRQSGTCIATSSWESIDAMRGSAARVAPIRDRAALMFDG-
TH_0116|M.thermoresistible__bu SGHVGLSLLVDRRSGRCIATSAWDREEARRDSAGPAERLRHRAAEVFGSP
Mflv_4652|M.gilvum_PYR-GCK DGYVGLSLLVDRQTGRCIVTTAWDSEEAMHASRRTADTYRDHAAEILGG-
Mvan_4767|M.vanbaalenii_PYR-1 HGFVGFSLLADRESGRCIAASAWQTEDAMRASAPLVVEVRDRAAQILGG-
* **.***.**.:* **.:::*: :* : . *.:** :: .
MUL_1752|M.ulcerans_Agy99 NARVEEWDIAMLHRDHRSRQGACVRATWLKVVPDQIERSLDFYGMYVLPE
MMAR_2168|M.marinum_M NARVEEWDIAMLHRDHRSRQGACVRATWLKVVPDQIERSLDFYGMYVLPE
Mb2588|M.bovis_AF2122/97 SARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPE
Rv2558|M.tuberculosis_H37Rv SARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPE
MAV_3433|M.avium_104 SARVEEWDIALLHRDHPSRDGACVRATWLKVVPDQLSRSLEFYRSSVLPE
TH_0116|M.thermoresistible__bu EPKAEDWEIAVLHRDHAAGDGACVRATWIKLVPDQRKRSLEYYRTAVLPS
Mflv_4652|M.gilvum_PYR-GCK SPTVDEWEIAALHRDHRSSPGACVRVTWARVAHENVERAVDGFRLATIPA
Mvan_4767|M.vanbaalenii_PYR-1 TVDVADWEIAVMHRHHESAEGACVRVSWVKVDPSHVESGIDLFKHSVLPA
. :*:** :**.* : *****.:* :: .: .:: : .:*
MUL_1752|M.ulcerans_Agy99 LEGLDGFCSASLMVDHPACRRAVSCATFDTMEAMARNRDQASELRSRRVR
MMAR_2168|M.marinum_M LEGLDGFCSASLMVDHPACRRAVSCATFDTMEAMARNRDQASELRSRRVR
Mb2588|M.bovis_AF2122/97 LESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRRVR
Rv2558|M.tuberculosis_H37Rv LESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRRVR
MAV_3433|M.avium_104 LEQLDGFCSASLMVDHPACRRAVACSTFDSMDAMARNRDRATELRSRRVR
TH_0116|M.thermoresistible__bu VEELDGFCSASLLIDS-AARRAVSSTTFDSHEAMERNREQATALRTARLR
Mflv_4652|M.gilvum_PYR-GCK LEELDGFCSASLMVDR-DSGFGVASVAFDSAEALRRNRQAMEELRSATIR
Mvan_4767|M.vanbaalenii_PYR-1 LEELEGHCSTSLLVNR-ATGAAVISTAYDSAEALQHHRPQLDRLRDATVE
:* *:*.**:**::: .* . ::*: :*: ::* ** :.
MUL_1752|M.ulcerans_Agy99 ELGAEVLDVAEFELAIAHLRVPELV
MMAR_2168|M.marinum_M ELGAEVLDVAEFELAIAHLRVPELV
Mb2588|M.bovis_AF2122/97 ELGAEVLDVAEFELAIAHLRVPELV
Rv2558|M.tuberculosis_H37Rv ELGAEVLDVAEFELAIAHLRVPELV
MAV_3433|M.avium_104 ELGAEVIDVAEFELAIAHLRVPELV
TH_0116|M.thermoresistible__bu ELGAELLDVGEFELAIAQLRVPELV
Mflv_4652|M.gilvum_PYR-GCK DAGAEILDECDCDLVLAHLRVPEMA
Mvan_4767|M.vanbaalenii_PYR-1 QAGAQMLEECDFELAIAHLRVPELV
: **:::: : :*.:*:*****:.