For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRPHRLFSRPRHQCWEVCAPLIVAAGVSALAGCSTDASNGTATTSSGPSAKTTAPPVSSLAPGAVGVSPT GVTTRIDVPAESTEEEYFQACHAAKVWMDAQPATEQPRIEPYLAMVQASESGVAGTWNMRWADLSLPPQA AVIVAAAAAANNECG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_0217 | lpqV | - | 100% (155) | lipoprotein LpqV |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1093c | lpqV | 1e-40 | 56.46% (147) | putative lipoprotein LPQV |
| M. gilvum PYR-GCK | Mflv_2032 | - | 4e-29 | 46.81% (141) | hypothetical protein Mflv_2032 |
| M. tuberculosis H37Rv | Rv1064c | lpqV | 1e-40 | 56.46% (147) | lipoprotein LpqV |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1181c | - | 1e-20 | 42.55% (141) | putative lipoprotein LpqV precursor |
| M. marinum M | MMAR_4402 | lpqV | 8e-87 | 98.06% (155) | lipoprotein LpqV |
| M. avium 104 | MAV_1191 | - | 2e-38 | 58.96% (134) | LpqV protein |
| M. smegmatis MC2 155 | MSMEG_5281 | - | 5e-32 | 47.97% (148) | LpqV protein |
| M. thermoresistible (build 8) | TH_4119 | - | 8e-28 | 45.26% (137) | PUTATIVE LpqV |
| M. vanbaalenii PYR-1 | Mvan_4685 | - | 2e-26 | 42.22% (135) | LpqV |
CLUSTAL 2.0.9 multiple sequence alignment
MUL_0217|M.ulcerans_Agy99 ----MRPHRLFSRPRHQCWEVCAPLIVAAGVSALAGCSTDA-------SN
MMAR_4402|M.marinum_M ----MRPHRLFSRPRHQCWEVCAPLIVAAGVSALAGCSTDA-------NN
Mb1093c|M.bovis_AF2122/97 ----MRPSRYAP-------LLCAMVLALAWLSAVAGCSRGG-------SS
Rv1064c|M.tuberculosis_H37Rv ----MRPSRYAP-------LLCAMVLALAWLSAVAGCSRGG-------SS
MAV_1191|M.avium_104 -----------------------MGIVLGVVTAAPGCSHGA-------PR
Mflv_2032|M.gilvum_PYR-GCK ----MRPNLRPLL-------SAG--GAAALLVVAA-CSSGT-----EAPS
Mvan_4685|M.vanbaalenii_PYR-1 ----MRR--YPVR-------GSG--AVVCVLALLSGCSSGT-----DTPP
MSMEG_5281|M.smegmatis_MC2_155 ----MRSYPWARK-------TAAGFAAAAGLSLLTACGSDTGKNTEEGQP
TH_4119|M.thermoresistible__bu ----MRS--LAIR-------ATV--TTAAVAAALSGCSSEP------GDT
MAB_1181c|M.abscessus_ATCC_199 MSWLVGTCYFGVVTAP--TRIAATLMACCVPLIGAACSSAS----DDKAA
. . *.
MUL_0217|M.ulcerans_Agy99 GTATTSSGPSAKTTAPPVSSLAPGAVGVSPTGVTTRIDVPAESTEEEYFQ
MMAR_4402|M.marinum_M GTATTSSGPSAKTTAPPVSSLAPGAVGVSPTGVTTRVDVPAESTEEEYFQ
Mb1093c|M.bovis_AF2122/97 KAGRSSS---------VAGTLPAGVVGVSPAGVTTRVDAPAESTEEEYYQ
Rv1064c|M.tuberculosis_H37Rv KAGRSSS---------VAGTLPAGVVGVSPAGVTTRVDAPAESTEEEYYQ
MAV_1191|M.avium_104 GAPAPAPARQSGIPAGPAAA-PPGAVGLSPGGVTTRIDIPADSTEEEYYQ
Mflv_2032|M.gilvum_PYR-GCK TSTGPATPTSSSE--AVTTPGAPAAPGMSPDGVTTAVEAPAESTEDDYFQ
Mvan_4685|M.vanbaalenii_PYR-1 ASSATSVTTTAAEPPAAAAPVPPGEVAISPGGVTTAVGAPAESTEDDYFQ
MSMEG_5281|M.smegmatis_MC2_155 AESSSVSAPASTSAEAAPPTVAPGEVGVSPGGVTTAVGAPAQSTEEEYFQ
TH_4119|M.thermoresistible__bu TEPSPAAPG------TTTTSPQPGAIEVSPGGVTTAMAVPAESTEDEYFR
MAB_1181c|M.abscessus_ATCC_199 PSPSVTAGTTTTSLGAPAAQPPAAGSGVSPAGVTTSVNAAPSSLEEEYYQ
.. :** **** : ...* *::*::
MUL_0217|M.ulcerans_Agy99 ACHAAKVWMDAQPATEQPRIEPYLAMVQASESG-VAGTWNMRWADLSLPP
MMAR_4402|M.marinum_M ACHAAKVWMDAQPATEQPRIEPYLAMVQASESG-VAGTWNMRWADLSLPR
Mb1093c|M.bovis_AF2122/97 ACHAARLWMDAQPGSGESLIEPYLAVVQASPSG-VAGSWHIRWAALTPAR
Rv1064c|M.tuberculosis_H37Rv ACHAARLWMDAQPGSGESLIEPYLAVVQASPSG-VAGSWHIRWAALTPAR
MAV_1191|M.avium_104 ACHAAKEWMDAQPKTGASLFEPYLSMVQASPSG-TAGSWNTPWSALAPAR
Mflv_2032|M.gilvum_PYR-GCK ACRAARAWMDQQGGDPRSQIEPYLKTVQSEQTA-GPGTFGERWSDLSPGQ
Mvan_4685|M.vanbaalenii_PYR-1 ACLAARTWMEQRGGVARSQIEPYLASVQSAPSA-GPGTFDRPWPELTPGE
MSMEG_5281|M.smegmatis_MC2_155 ACHAAKVWMDEKGGDPRAQIEPYLASLQAPDAAPGPGTYDKTWAELEPAR
TH_4119|M.thermoresistible__bu ACITARQWMEEQDGELADQVEPYLAMLQRSDEA-GPSTFDTPWSQLPPGR
MAB_1181c|M.abscessus_ATCC_199 ACRAAADWMTGKHDGPDQLVEGYLQSIQSTGNI-GPGTFHKSWHELTADR
** :* ** : .* ** :* ..:: * *
MUL_0217|M.ulcerans_Agy99 QAAVIVAAAAAANNECG
MMAR_4402|M.marinum_M QAAVIVAAAAAANNECG
Mb1093c|M.bovis_AF2122/97 QAAVIVAARAAANAECG
Rv1064c|M.tuberculosis_H37Rv QAAVIVAARAAANAECG
MAV_1191|M.avium_104 QAAVIVAARAAANDECG
Mflv_2032|M.gilvum_PYR-GCK QSAVIVAVEAAADALCG
Mvan_4685|M.vanbaalenii_PYR-1 QAAVIVAVEAAADALCG
MSMEG_5281|M.smegmatis_MC2_155 QAAVIVAVAAAADDMCG
TH_4119|M.thermoresistible__bu QAAVIVAVRAAADELCG
MAB_1181c|M.abscessus_ATCC_199 QAAVIVATNAAAEQQCG
*:*****. ***: **