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M. smegmatis MC2 155 MSMEG_6946 (rpmH)

annotation: 50S ribosomal protein L34
coordinates: 6985943 - 6986086
length: 47

AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_6946rpmH-100% (47)50S ribosomal protein L34

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3955crpmH1e-1885.11% (47) 50S ribosomal protein L34
M. gilvum PYR-GCKMflv_0828rpmH3e-1989.36% (47) 50S ribosomal protein L34
M. tuberculosis H37RvRv3924crpmH1e-1885.11% (47) 50S ribosomal protein L34
M. leprae Br4923MLBr_02713rpmH7e-2089.36% (47) 50S ribosomal protein L34
M. abscessus ATCC 19977MAB_4955crpmH2e-1989.36% (47) 50S ribosomal protein L34
M. marinum MMMAR_5568rpmH6e-2093.62% (47) 50S ribosomal protein L34 RpmH
M. avium 104MAV_5313rpmH1e-1991.49% (47) 50S ribosomal protein L34
M. thermoresistible (build 8)-----
M. ulcerans Agy99MUL_5077rpmH4e-2093.62% (47) 50S ribosomal protein L34
M. vanbaalenii PYR-1Mvan_6078rpmH3e-1989.36% (47) 50S ribosomal protein L34

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_0828|M.gilvum_PYR-GCK          MAKGKRTFQPNNRRRAKVHGFRLRMRTRAGRAIVTARRAKGRRSLTA
Mvan_6078|M.vanbaalenii_PYR-1       MAKGKRTFQPNNRRRAKVHGFRLRMRTRAGRAIVTARRAKGRRSLTA
MSMEG_6946|M.smegmatis_MC2_155      MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA
MAB_4955c|M.abscessus_ATCC_199      MAKGKRTFQPNNRRRARTHGFRLRMRTRAGRAIIAGRRRKGRRELTA
MMAR_5568|M.marinum_M               MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA
MUL_5077|M.ulcerans_Agy99           MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA
MAV_5313|M.avium_104                MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSGRRRKGRRALSA
Mb3955c|M.bovis_AF2122/97           MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA
Rv3924c|M.tuberculosis_H37Rv        MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA
MLBr_02713|M.leprae_Br4923          MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSDRRRKGRRTLTA
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