For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ARPYPREFRDDVVRVARNRDDGVTIEQIATDFGVHPMTLHKWMRQADIDEGAKPGKSTGESAELREARRR IKLLEQENEVLRRATAYLSQANLPGKGSTRS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_6889 | - | - | 100% (102) | transposase |
M. smegmatis MC2 155 | MSMEG_4106 | - | 3e-51 | 92.16% (102) | transposase |
M. smegmatis MC2 155 | MSMEG_4088 | - | 3e-51 | 92.16% (102) | transposase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2839c | - | 9e-12 | 36.84% (95) | transposase |
M. gilvum PYR-GCK | Mflv_0616 | - | 3e-51 | 94.00% (100) | transposase IS3/IS911 family protein |
M. tuberculosis H37Rv | Rv3474 | - | 1e-11 | 36.84% (95) | transposase IS6110 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2087 | - | 4e-49 | 91.00% (100) | transposase |
M. marinum M | MMAR_4592 | - | 2e-39 | 85.23% (88) | transposase |
M. avium 104 | MAV_3272 | - | 1e-10 | 32.97% (91) | ISAfe7, transposase OrfA |
M. thermoresistible (build 8) | TH_1992 | - | 3e-11 | 34.78% (92) | POSSIBLE TRANSPOSASE FOR INSERTION ELEMENT IS6110 |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_5960 | - | 1e-52 | 96.08% (102) | transposase IS3/IS911 family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0616|M.gilvum_PYR-GCK ---------------------------------------------MPRPY MAB_2087|M.abscessus_ATCC_1997 ----------------------------MTSELACPKRAGWKDVSVPRPY Mvan_5960|M.vanbaalenii_PYR-1 ---------------------------------------------MARPY MSMEG_6889|M.smegmatis_MC2_155 ---------------------------------------------MARPY MMAR_4592|M.marinum_M ---------------------------------------------MARPY Mb2839c|M.bovis_AF2122/97 -----------------------------------------MSGGSSRRY Rv3474|M.tuberculosis_H37Rv -----------------------------------------MSGGSSRRY TH_1992|M.thermoresistible__bu VLAKLIWQQHWGTWLKFGRADKLFTRLRAARLDHTVEAEIRRLAAVDXKY MAV_3272|M.avium_104 -----------------------------------MPKEQSPGKPTTRRY * Mflv_0616|M.gilvum_PYR-GCK PREFRDDVVRVARNRD------DGVTIEQIATDFGVH-PMTLHKWMRQAD MAB_2087|M.abscessus_ATCC_1997 PREFRDDVVRVARNRD------DGVTIEQIATDFGVH-PMTLTKWMRQAD Mvan_5960|M.vanbaalenii_PYR-1 PREFRDDVVRVARNRD------DGVTIEQIATDFGVH-PMTLHKWMRQAD MSMEG_6889|M.smegmatis_MC2_155 PREFRDDVVRVARNRD------DGVTIEQIATDFGVH-PMTLHKWMRQAD MMAR_4592|M.marinum_M PREFRDDVVRVARNRE------DGVTIEQIAADFGVH-PMTLRKWIRQAD Mb2839c|M.bovis_AF2122/97 PPELRERAVRMVAEIR-GQHDSEWAAISEVARLLGVGCAETVRKWVRQAQ Rv3474|M.tuberculosis_H37Rv PPELRERAVRMVAEIR-GQHDSEWAAISEVARLLGVGCAETVRKWVRQAQ TH_1992|M.thermoresistible__bu SPEFRDRALRLLDTTMEDSGVSEFEAIKSVASKLGVS-QESVRRWRRKAE MAV_3272|M.avium_104 SAEEKAAAVRMVRTLR-AELGTEQGTVQRVARQLGYG-VESVRTWVRQVD . * : .:*: : ::. :* :* :: * *:.: Mflv_0616|M.gilvum_PYR-GCK VDEGAKPGKSTGESVELRELRRRNRLLEQENEVLRRASAYLS-----QAN MAB_2087|M.abscessus_ATCC_1997 VDEGAKPGKSTNDSADLRELRRRNRLLEQENEVLRRAAAYLS-----QAN Mvan_5960|M.vanbaalenii_PYR-1 IDEGAKPGKSTGESAELRELRRRNRLLEQENEVLRRAAAYLS-----QAN MSMEG_6889|M.smegmatis_MC2_155 IDEGAKPGKSTGESAELREARRRIKLLEQENEVLRRATAYLS-----QAN MMAR_4592|M.marinum_M IDDGAIPGKTTNEPAELRELRRRNRLLEQENEVLRRAAAYACRPVAARAR Mb2839c|M.bovis_AF2122/97 VDAGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFA------AE Rv3474|M.tuberculosis_H37Rv VDAGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFA------AE TH_1992|M.thermoresistible__bu IDAGQRPGVTSTEHAEIRKLKRENAELRRANEILKSASAFFA------AE MAV_3272|M.avium_104 IDEGLAPGVTTSESKKVKELEQEIRELKRANEILKRAASFFG------AE :* * ** :: : .::. .: *.: * :*: *::: *. Mflv_0616|M.gilvum_PYR-GCK L----PGKGSTRS------- MAB_2087|M.abscessus_ATCC_1997 L----PGKGSTRS------- Mvan_5960|M.vanbaalenii_PYR-1 L----PGKGSTRS------- MSMEG_6889|M.smegmatis_MC2_155 L----PGKGSTRS------- MMAR_4592|M.marinum_M LRRARPSRGWARQLRRSRPA Mb2839c|M.bovis_AF2122/97 L-----DRPAR--------- Rv3474|M.tuberculosis_H37Rv L-----DRPAR--------- TH_1992|M.thermoresistible__bu L-----DRPATK-------- MAV_3272|M.avium_104 L-----DRQHKK-------- * .: