For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GQVNTLTDPSAPEGPTGQLVNWVRTLEWDQVPEHVRVRAAHLLLDGIGCALVGAQLPWSRLATDAVLGIE GDGAVPVIGTGRTSTPVGAVLLNSTFIQGFELDDFHPFAPLHSASLVVPALLATTAHLNRPVSGKELLMA AIVGFETGPRIGRALGGTEMLSRGWHSGPVFGGIGTALACGRLRGLNGEQLEDAVGFAATQSAGLMSAQY EAMGKRMQHGFAARNGFYSAALAQSGYTGIDQVLERPYGGFLAVYGEGHRPDASAITRGLGDEWETTAIM VKSWAVMGGLHGVVEAARILRNRLHGRTIEHIDIRVGDVVYHHGWWQPQRPLTAIGAQMNIGYAAAVTLL DGVALPQQFTAERLDADDVWRLLARTHVELDESIDELPPTERFQTHLTLTFSDGSTETASVMAPHGNPRD PVTNHEVVDKFARLVAPVMPADRAAAIQHAFLGLPEVPDVAPLVELLSGPVGRVLD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_6856 | - | - | 100% (477) | MmgE/PrpD family protein |
M. smegmatis MC2 155 | MSMEG_4124 | - | 7e-09 | 27.18% (195) | hypothetical protein MSMEG_4124 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_1742 | - | 1e-166 | 61.68% (475) | MmgE/PrpD family protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_6856|M.smegmatis_MC2_155 --MGQVNTLTDPSAPEGPTGQLVNWVRTLEWDQVPEHVRVRAAHLLLDGI MAV_1742|M.avium_104 MTALQQETVTDP---VGPTGLLATWVAELTLDDVPPPVVDRAKHLLLDGI * :*:*** **** *..** * *:** * ** ******* MSMEG_6856|M.smegmatis_MC2_155 GCALVGAQLPWSRLATDAVLGIEGDGAVPVIGTGRTSTPVGAVLLNSTFI MAV_1742|M.avium_104 GCALVGAQLPWSRIATDAVLALEGSGDSIVIGTGRRTSAPAAAVLNGTFI *************:******.:**.* ****** ::. .*.:**.*** MSMEG_6856|M.smegmatis_MC2_155 QGFELDDFHPFAPLHSASLVVPALLATTAHLNRPVSGKELLMAAIVGFET MAV_1742|M.avium_104 QGFELDDFHPLAPLHSCSLLIPALLSTAATRSATTTGRELLPAAIAGFEV **********:*****.**::****:*:* . ..:*:*** ***.***. MSMEG_6856|M.smegmatis_MC2_155 GPRIGRALGGTEMLSRGWHSGPVFGGIGTALACGRLRGLNGEQLEDAVGF MAV_1742|M.avium_104 GPRVGHALHGTQMLDRGWHSGPVFGTHAAAMASGKLRGLPPAQLEDALGL ***:*:** **:**.********** .:*:*.*:**** *****:*: MSMEG_6856|M.smegmatis_MC2_155 AATQSAGLMSAQYEAMGKRMQHGFAARNGFYSAALAQSGYTGIDQVLERP MAV_1742|M.avium_104 AGTQSAGLMAAQYEAMSKRMHHGLAARNGFYAAGLAAAGYTGIKRVFERE *.*******:******.***:**:*******:*.** :*****.:*:** MSMEG_6856|M.smegmatis_MC2_155 YGGFLAVYGEGHRPDASAITRGLGDEWETTAIMVKSWAVMGGLHGVVEAA MAV_1742|M.avium_104 YGGFLSVFGEGHDPDAAALTADLGQRWETSLIMVKSYAAMGGLHGAIDAA *****:*:**** ***:*:* .**:.***: *****:*.******.::** MSMEG_6856|M.smegmatis_MC2_155 RILRNRLHGRTIEHIDIRVGDVVYHHGWWQPQRPLTAIGAQMNIGYAAAV MAV_1742|M.avium_104 RRLRNSVAPQNISSVDITVGETVYKHGWWLPERPLTPIGAQMNIGYATAA * *** : :.*. :** **:.**:**** *:****.**********:*. MSMEG_6856|M.smegmatis_MC2_155 TLLDGVALPQQFTAERLDADDVWRLLARTHVELDESIDELPPTERFQTHL MAV_1742|M.avium_104 ALLDGNVLPEQFTAARLDADDIWALISATRVHLDESLADADITEKFRTDL :**** .**:**** ******:* *:: *:*.****: : **:*:*.* MSMEG_6856|M.smegmatis_MC2_155 TLTFSDGSTETASVMAPHGNPRDPVTNHEVVDKFARLVAPVMPADRAAAI MAV_1742|M.avium_104 AVTTREGTVHRARVALPHGAPNDPVTNDEVVAKFHALADRVTSRGRAAAI ::* :*:.. * * *** *.*****.*** ** *. * . .***** MSMEG_6856|M.smegmatis_MC2_155 QHAFLGLPEVPDVAPLVELLSGPVGRVLD MAV_1742|M.avium_104 ERAVIRLDDLTDVENLMDLLADPVAGALD ::*.: * ::.** *::**:.**. .**