For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTSDRTALLAHGLGGSTDLPIPYTYALLGAAWTLTFTFAVVAFAWRRPRFDPDKPGHPLPEWVTTFVDSP VTRWGAGLLALAFTGWVGALSFTGPQDASNPLPGVFYVLLWVGLVAVSLLIGPVWRLISPVRTLIRLIPA TTGRLRYPARLGYWPAAAGLFAFVWLELASADPGSLAAIRNWLLIYLAVTLAGALCCGQRWLSNADPFEV YSTAASKLSPLRRHAGRIVIGNPFDHLRSLPVRPGVVAVLAVLLGSTAFDSFSAMPVWRNFVDDNSGSAS GATLIRTAGLAVFVATVALTFWAAARATGGVDPQQRRELPGQMAHSLVPIVIGYVFAHYLTYLVERGQQT IFLLFGMHDAQINYILSMHPAVLSSLKVGFVLAGHVAGVIAAHDRALRLLPARHRLTGQLAMMLVMVGYT FTGLYLLFGG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_6504 | - | - | 100% (430) | hypothetical protein MSMEG_6504 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_1091 | - | 1e-174 | 70.75% (424) | hypothetical protein Mflv_1091 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1629c | - | 1e-170 | 67.57% (441) | hypothetical protein MAB_1629c |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_3200 | - | 1e-157 | 63.23% (446) | hypothetical protein MAV_3200 |
M. thermoresistible (build 8) | TH_1794 | - | 0.0 | 72.02% (436) | conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_5726 | - | 0.0 | 73.76% (423) | hypothetical protein Mvan_5726 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1091|M.gilvum_PYR-GCK ----MTAQILAHGLGGSTDLPIPFTYALVGAAWTLTATFAVVAFAWRTPK Mvan_5726|M.vanbaalenii_PYR-1 ---------MAHGLGGSADLPIPYTYALIGAAWALTFTFAVVALAWRTPR MAB_1629c|M.abscessus_ATCC_199 MTGDRTTTVLAHGLGGSADLPIPYTYALIGAAWALTFTFAVVALAWRKPR TH_1794|M.thermoresistible__bu ------VTYLAHGIGGSTDLPIPFTYALIGASWALAITFAVVAFAWRRPR MSMEG_6504|M.smegmatis_MC2_155 -MTSDRTALLAHGLGGSTDLPIPYTYALLGAAWTLTFTFAVVAFAWRRPR MAV_3200|M.avium_104 MSPAPAAVVLAHGLGGSGDLPVPYAYAMVGAAWALTFTFALVAFAWRRPR :***:*** ***:*::**::**:*:*: ***:**:*** *: Mflv_1091|M.gilvum_PYR-GCK FDAARPGRALPPWVTRSVDAPATRWVLAAAALGLTGWVAVAAVRGPQTSE Mvan_5726|M.vanbaalenii_PYR-1 FDAARPGRPLPQWVTRAVDAPATRWTLAAATLLFTGWVAVSTFVGPQDSG MAB_1629c|M.abscessus_ATCC_199 FDTNRTGRPLPCWVTAIVDAPAARGAVTAVVLAATAWITVAAVLGPQDGR TH_1794|M.thermoresistible__bu FDPDRPGRALPRWVTTVVDAAATRWALAAAALLFTGWVALAAFFGPQDRS MSMEG_6504|M.smegmatis_MC2_155 FDPDKPGHPLPEWVTTFVDSPVTRWGAGLLALAFTGWVGALSFTGPQDAS MAV_3200|M.avium_104 FDPLKPGRALPAALTAFVDARATRYTAAGLALAVAAWAVAAGVWGPESDA **. :.*:.** :* **: .:* .* :.* . **: Mflv_1091|M.gilvum_PYR-GCK NPLPGVFYVLLWVGVVALSLAIGPVWRVLSPVRALH----RFL--GGRNL Mvan_5726|M.vanbaalenii_PYR-1 NALPGVFYVLLWVGLVALSVLLGPVWRVLSPVRALH----RFS--GGRSL MAB_1629c|M.abscessus_ATCC_199 NALPGVFYVLLWVGVVAASLLCGPVWRVLSPVRAAY----RLLPLARRPP TH_1794|M.thermoresistible__bu NPLPGVFYVLLWVGLVALSALIGPVWRAISPVRAVY----RLLSLPRRLP MSMEG_6504|M.smegmatis_MC2_155 NPLPGVFYVLLWVGLVAVSLLIGPVWRLISPVRTLI----RLIP--ATTG MAV_3200|M.avium_104 NALLGAFYVLLWVGLVAVSLAIGPVWRVISPIRTLYLLARRVVPERLARP *.* *.********:** * ***** :**:*: *. Mflv_1091|M.gilvum_PYR-GCK GRRYPDALGYWPAAAGLFAFVWLELASPDPGSLGAIKIWLVVYLAVTLAG Mvan_5726|M.vanbaalenii_PYR-1 GRTYPAALGYWPAAAGLFAFVWLELASPDPGSLGAIRTWLLVYLAVTVAG MAB_1629c|M.abscessus_ATCC_199 PVAYPRRWGYWPAAAGLYLFVWLELASADPGSLGAVKIWLLGYLCVTMAG TH_1794|M.thermoresistible__bu DRGYPRQLGYWPAALGLFAFVWLELAGPNPGSLTAIRTWLLVYLVVTLAG MSMEG_6504|M.smegmatis_MC2_155 RLRYPARLGYWPAAAGLFAFVWLELASADPGSLAAIRNWLLIYLAVTLAG MAV_3200|M.avium_104 RLSYPKRWGYRPAALGLFAFVWMELASPNPAAPSWVTGWLLVYAVLMAGG ** ** *** **: ***:***..:*.: : **: * : .* Mflv_1091|M.gilvum_PYR-GCK ALWCGPRWNARADPFEVYSVVASRFSLFGRNPD-GRIAIGNPFNRLLTLP Mvan_5726|M.vanbaalenii_PYR-1 ALWCGTQWCARADPFEVYSVVASRVSPLRRNSD-GRIAIGNPFDHLPSLP MAB_1629c|M.abscessus_ATCC_199 ALACGTRWCAQADPFEVYSMVASRLSPLRRNTD-GLIAYGNPFDHLPSLP TH_1794|M.thermoresistible__bu ALWCGPRWFGRADPFEVYSVVASRVSALRRNPQSGRIVIGNPFDHLPSLP MSMEG_6504|M.smegmatis_MC2_155 ALCCGQRWLSNADPFEVYSTAASKLSPLRRHAG--RIVIGNPFDHLRSLP MAV_3200|M.avium_104 AWLCGQRWLARADPFGVYSMAVSRLSPFRRNPRTGRIVVGNPLDHLPSLP * ** :* ..**** *** ..*:.* : *:. *. ***:::* :** Mflv_1091|M.gilvum_PYR-GCK VRPGVVAVLSVLLGSTAFDSFSAMPQIRRLVD----ELTD-SALAATALR Mvan_5726|M.vanbaalenii_PYR-1 VRPGIVAVLSVLLGSTAFDSFSATPQFRGFVD----DLTD-SGLGATAVR MAB_1629c|M.abscessus_ATCC_199 IRPGMVAVLAVLLGSTAFDSFSAMPEWRGLVD----ALAQGSTVASVAIR TH_1794|M.thermoresistible__bu VRPGIVAVLAVLLGSTAFDSFSATPRWRDFVD----STTS-GVLTATLLN MSMEG_6504|M.smegmatis_MC2_155 VRPGVVAVLAVLLGSTAFDSFSAMPVWRNFVD----DNSG-SASGATLIR MAV_3200|M.avium_104 VRPGVVVLLAVLLGSTAFDSFSSSPTWRGFSDRLTREFAAPPALASSVLR :***:*.:*:************: * * : * : : :. Mflv_1091|M.gilvum_PYR-GCK TVGLVLFVGIVAATFTLAARCTGGVDARTRRELPGLLAHSLIPIVLGYVF Mvan_5726|M.vanbaalenii_PYR-1 TAGLALFACVVAATFWAAARCTGGVDARRRRELPGLFAHSLIPIVIGYVF MAB_1629c|M.abscessus_ATCC_199 TAGLTVFVIVVATTFCLAARATGGVDRATRRNLPGLLAHSLIPIVIGYIF TH_1794|M.thermoresistible__bu TAGLLVFIGVVAGTFWGAARATGGVDPEQRRRLPGRMAHSLIPIVIGYVF MSMEG_6504|M.smegmatis_MC2_155 TAGLAVFVATVALTFWAAARATGGVDPQQRRELPGQMAHSLVPIVIGYVF MAV_3200|M.avium_104 TLGLIVFICVVALTFSLAARATGGVDAQQRRALPGQMAHSLIPIVVGYIF * ** :* ** ** ***.***** ** *** :****:***:**:* Mflv_1091|M.gilvum_PYR-GCK AHYLTYLIERGQQTVYRLFG----------SADAEVVYVLSMHPGLLASL Mvan_5726|M.vanbaalenii_PYR-1 AHYLTYLVERGQQTVYRLLG----------QPDAEVMYVLSMHPAVLATL MAB_1629c|M.abscessus_ATCC_199 AHYLTYLVERGQQTVLRLADPLGRGW----LADVDVSYALSMHPSVLATL TH_1794|M.thermoresistible__bu AHYLSYLVERGQQTLYQLADPLGAGWNPFGLADTEVNYVLSMHPAVLSTL MSMEG_6504|M.smegmatis_MC2_155 AHYLTYLVERGQQTIFLLFG----------MHDAQINYILSMHPAVLSSL MAV_3200|M.avium_104 AHYLSYLVERGQQAVFALADPFGRGWNPLGLAHLQVAYVLSMHPPVLAAI ****:**:*****:: * . . :: * ***** :*::: Mflv_1091|M.gilvum_PYR-GCK KVGFVLFGHVAGVIAAHDRALAVLPRQHQLTGQLAMMLVMVGYTFTGLYL Mvan_5726|M.vanbaalenii_PYR-1 KVGFVVAGHIAGVVAAHDRALKVLPARHQLTGQLAMMLVMVGYTFTGLYL MAB_1629c|M.abscessus_ATCC_199 KVGFVLAGHIAGVVAAHDQALKVLPKQHQVTGQLAMMLVMVGYTFTGLYL TH_1794|M.thermoresistible__bu KVGFVVAGHIAAVVAAHDCALKLLPRAHQLTGQLAMMLVMVGYTFTGLYL MSMEG_6504|M.smegmatis_MC2_155 KVGFVLAGHVAGVIAAHDRALRLLPARHRLTGQLAMMLVMVGYTFTGLYL MAV_3200|M.avium_104 KVTCVVTGHIVAVIAAHDKALRLLPAGHQLTGQLAMMLVMVGYTFTGLYL ** *: **:..*:**** ** :** *::******************** Mflv_1091|M.gilvum_PYR-GCK LFGG Mvan_5726|M.vanbaalenii_PYR-1 LFGG MAB_1629c|M.abscessus_ATCC_199 LFGG TH_1794|M.thermoresistible__bu LFGG MSMEG_6504|M.smegmatis_MC2_155 LFGG MAV_3200|M.avium_104 LFGG ****