For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_6228 (-)

VDSLVTVIVPAFVGVLTAVAAVIGLEYRDVDAFERRRAIWQWLLVLLATVATAGATNSASGVGHLVTAAA
LGTFAAAAVILAHFMWRRRVPDAEPRIVGLAMSAAVLAVLVVASSVTLTYMQGKSCRQADPLIQSSLASS
GFILPVFDANQGPAKGDFDNWSRLIREQADAVTAGGQVAESAGHIGELAGQITDAVRSDDRGNHAMLGTQ
YYDELKVLLTKCHPQG

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_6228	-	-	100% (226)	hypothetical protein MSMEG_6228

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	-	-	-	-	-
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	-	-	-	-	-
M. abscessus ATCC 19977	-	-	-	-	-
M. marinum M	-	-	-	-	-
M. avium 104	MAV_3786	-	1e-05	23.19% (263)	hypothetical protein MAV_3786
M. thermoresistible (build 8)	-	-	-	-	-
M. ulcerans Agy99	-	-	-	-	-
M. vanbaalenii PYR-1	-	-	-	-	-

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_6228|M.smegmatis_MC2_155      MDSLVT--------VIVPAFVGVLTAVAAVIG--------LEYRDVDAFE
MAV_3786|M.avium_104                MPDLMAGIAWPWRLVFLVGVSALFAQQAVIVGRRASHEYVAATRGLDRAE
                                    * .*::        *:: .. .:::  *.::*           *.:*  *

MSMEG_6228|M.smegmatis_MC2_155      RRRAIWQWLL--------VLLATVATAG----------------------
MAV_3786|M.avium_104                RAQAIAASVRGDVPASAAVLVAAIRIAHLRLGFGRSTPNRIAVSYGLLTV
                                    * :**   :         **:*::  *                       

MSMEG_6228|M.smegmatis_MC2_155      -----ATNSASGVGHLVTAAALGTFAAAAVILAHFMWR------------
MAV_3786|M.avium_104                SWLALTATNADGPGRMALKGVVAAFLAVTGVRGWLVARRVERRIILLQDA
                                         ::..*.* *::.  ..:.:* *.: : . :: *            

MSMEG_6228|M.smegmatis_MC2_155      -----------RRVPDAEPRIVGLAMSAAVLAVLVVASS-----VTLTYM
MAV_3786|M.avium_104                SQRLPGAAAALRAAPRTEPASPRWRPTVALLTAVVLVTTGALAAVYLAHR
                                               * .* :**       :.*:*:.:*:.::     * *:: 

MSMEG_6228|M.smegmatis_MC2_155      QGKSCRQADPLIQSSLASSGFILPVFDANQ--GPAKGDFDNWSRLIREQA
MAV_3786|M.avium_104                RSPDCRTANDMARFVASHPDMLDPAFIPANSGGPTLADYQLWSEQLDR--
                                    :. .** *: : :   : ..:: *.* . :  **: .*:: **. : .  

MSMEG_6228|M.smegmatis_MC2_155      DAVTAGGQVAESAGHIGELAGQITDAVRSD--------------DRGNHA
MAV_3786|M.avium_104                YAALSGGDVAPGLRSAAALSARATAVVREARADPADWQDPRQQRRRNDYA
                                     *. :**:** .    . *:.: * .**.                *.::*

MSMEG_6228|M.smegmatis_MC2_155      MLGTQYYDELKVLLTKCHPQG-------
MAV_3786|M.avium_104                TIAGQLVTEVRALESHCPPRSSLLTRRT
                                     :. *   *::.* ::* *:.