For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SSEPLDTITPAPEVRAESTSPAPRPAPKLKPVRVARRRPHRRLVAIVAAVVLAVGTAVVGGLTYVLVDQQ RTYEAAQERDQRFVDTAKQTVVNMFSYTQDTIDESVNRFIDGTSGPLRDMMSQGNNADNLKALFRDTQAS SEAVVNGAALEKIDEIAKNASVLISVWVTVTDIDGVNAPTKPYRLRVIVHEDDNGHMTGYDLKYPDGGN*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5894 | - | - | 100% (210) | hypothetical protein MSMEG_5894 |
M. smegmatis MC2 155 | MSMEG_2864 | - | 4e-15 | 30.05% (183) | hypothetical protein MSMEG_2864 |
M. smegmatis MC2 155 | MSMEG_0886 | - | 9e-12 | 27.51% (189) | serine/threonine-protein kinase PknD |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3523c | - | 3e-64 | 60.38% (212) | Mce associated alanine and valine rich protein |
M. gilvum PYR-GCK | Mflv_1562 | - | 8e-51 | 79.31% (116) | hypothetical protein Mflv_1562 |
M. tuberculosis H37Rv | Rv3493c | - | 3e-64 | 60.38% (212) | Mce associated alanine and valine rich protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4147c | - | 6e-40 | 46.31% (203) | MCE-family protein |
M. marinum M | MMAR_4981 | - | 3e-64 | 63.05% (203) | hypothetical protein MMAR_4981 |
M. avium 104 | MAV_0663 | - | 9e-68 | 64.98% (217) | hypothetical protein MAV_0663 |
M. thermoresistible (build 8) | TH_2239 | - | 3e-61 | 58.69% (213) | CONSERVED HYPOTHETICAL MCE ASSOCIATED ALANINE AND VALINE RICH |
M. ulcerans Agy99 | MUL_4056 | - | 2e-64 | 63.05% (203) | hypothetical protein MUL_4056 |
M. vanbaalenii PYR-1 | Mvan_5196 | - | 2e-72 | 67.80% (205) | hypothetical protein Mvan_5196 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1562|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_5196|M.vanbaalenii_PYR-1 --MQ-------ESVTPPQRVRRRASRAAGPVGDSAT-------------- MSMEG_5894|M.smegmatis_MC2_155 --MSSEP---LDTITPAPEVR----------AESTS-------------- Mb3523c|M.bovis_AF2122/97 --MAADTGVAGGQQSTTRRARRKASRPAGPAEGESSRPAQGAATV--RAA Rv3493c|M.tuberculosis_H37Rv --MAADTGVAGGQQSTTRRARRKASRPAGPAEGESSRPAQGAATV--RAA MMAR_4981|M.marinum_M --MESAD---ADKQTPTQRVRRRASRAAGPAKSESGESDAGETTVGVTAA MUL_4056|M.ulcerans_Agy99 --MESAD---ADKQTPTQRVRRRASRAAGPAKSESGESDAGETTVGVTAA MAV_0663|M.avium_104 MDPAGADAAAADQPTSRPRARRRASRAAGPAKSESTQAVTVATEV---AA TH_2239|M.thermoresistible__bu ------------MTTSSSRQRRRAYRAPGPAGETAADIVVKTES------ MAB_4147c|M.abscessus_ATCC_199 --MTE------EKKSASQTTRRRAARPAGPTGEVSA-------------- Mflv_1562|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_5196|M.vanbaalenii_PYR-1 PAPASVSVEVTTPVRPVRPVGPPPRRRPHRRLVAILSIAVTFVAVAALVV MSMEG_5894|M.smegmatis_MC2_155 PAPRPAP-----KLKPVR----VARRRPHRRLVAIVAAVVLAVGTAVVGG Mb3523c|M.bovis_AF2122/97 ARTESKPAKAAKPA--LRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAW Rv3493c|M.tuberculosis_H37Rv ARTESKPAKAAKPA--LRPVKPPPRRPAHRVLVGWLSLAAGLLAIAALAW MMAR_4981|M.marinum_M PSTAKRPAKPAKPARSLTAVRPPPRRPAHRKLVGWLSAAAGLVLAAALGT MUL_4056|M.ulcerans_Agy99 PSTAKRPAKPAKPARSLTAVRPPPRRPAHRKLVGWLSAAAGLVLAAALGT MAV_0663|M.avium_104 PAPAPKPS--AKSGKTLKSLKPPPRRQPHRTLVAWISFAAAVLAVGALAG TH_2239|M.thermoresistible__bu APKPVTPVSAPVTRPPAGPLGPPPRRPANSRLVAVLALSVGALLVAVVVG MAB_4147c|M.abscessus_ATCC_199 -EPISVSLGRTEALSKPEPTVADSRRPGNTRGVLRAATVLVVVLVGALGV Mflv_1562|M.gilvum_PYR-GCK --------------------------------MFSYTQNTIDESVDRFVD Mvan_5196|M.vanbaalenii_PYR-1 AVAVMVNQQRTIEAQQERERRFVDTAAQSVVNMFSYTQNTIDESVDRFVN MSMEG_5894|M.smegmatis_MC2_155 LTYVLVDQQRTYEAAQERDQRFVDTAKQTVVNMFSYTQDTIDESVNRFID Mb3523c|M.bovis_AF2122/97 GVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVN Rv3493c|M.tuberculosis_H37Rv GVTALVMQNRDADARQARNQRFVDAATQTVVNMFSYTPDTIDESVNRFVN MMAR_4981|M.marinum_M GVAVLMVGHRDAEAVQARQQRFVDTATQTVVNMFSYTPDTIDQAVNRFVD MUL_4056|M.ulcerans_Agy99 GVAVLMVGHRDAEAVQARQQRFVDTATQTVVNMFSYTPDTIDQAVNRFVD MAV_0663|M.avium_104 GVAVLFVQQRDAQAKQSRDQRFVDTATQTVVNMFSYKQDNIDESVNRFVN TH_2239|M.thermoresistible__bu AVAVMTVQQNRVQADLDHKQRFVDTASQMVVNMFSFTQDTVEESVNRFVD MAB_4147c|M.abscessus_ATCC_199 ALALMGRAQHRDDLRAARDQRFVDTAVQTVTNMMTYSPDSIDKNVDQFVN *:::. :.::: *::*:: Mflv_1562|M.gilvum_PYR-GCK GTSGPLRAMMTQEGNVENLKLLFRDTNATSEAVINGAALERIDEIADNAA Mvan_5196|M.vanbaalenii_PYR-1 GTSGPLRAMMTQEGNVENLKLLFRDTNATSEAVVNGAALEKIDEIGKNAA MSMEG_5894|M.smegmatis_MC2_155 GTSGPLRDMMSQGNNADNLKALFRDTQASSEAVVNGAALEKIDEIAKNAS Mb3523c|M.bovis_AF2122/97 GTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNAS Rv3493c|M.tuberculosis_H37Rv GTSGPLRGMLNANNNVDNLKGLFRATNATSEAVVNGAALEGIDEISDNAS MMAR_4981|M.marinum_M GTSGPLRGMLSANNNVENLKGLFRATNATSEAVINGAALEDIDSVTDNAS MUL_4056|M.ulcerans_Agy99 GTSGPLRGMLSANNNVENLKGLFRATNATSEAVINGAALEDIDSVTDNAS MAV_0663|M.avium_104 GTSGPLRGMLSANNNVENLKGLFRSTNATSEAVVNGAALEGVDAVTDNAS TH_2239|M.thermoresistible__bu STSGPLRDMLMHNNNTENLKAMFRDTNASSEAVVNGAALESHDPIGRKAA MAB_4147c|M.abscessus_ATCC_199 STSGPLRGTFNP-DNTANLKALYHQTGTSSEVVIKKASLESIDEVSKKAS .****** : .*. *** ::: * ::**.*:: *:** * : :*: Mflv_1562|M.gilvum_PYR-GCK VLVSVRVTVTDLD-GNNAPSEPYRMRVIVHEDDNGHMTAYDLKYPDGGN Mvan_5196|M.vanbaalenii_PYR-1 VLVSVRVTVTDLD-GNNAPSEPYRMRVIIHEDDNGHMTAYDLKYPDGGN MSMEG_5894|M.smegmatis_MC2_155 VLISVWVTVTDID-GVNAPTKPYRLRVIVHEDDNGHMTGYDLKYPDGGN Mb3523c|M.bovis_AF2122/97 VLVSVRVTVADID-GVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN Rv3493c|M.tuberculosis_H37Rv VLVSVRVTVADID-GVNKPSMPYRLRVIVHEDENGRMTGYDLKYPDGGN MMAR_4981|M.marinum_M VLVSVRVTVADID-GVNKPSMPYRLRVIVHEDDTGRMTGYDLKYPDGGN MUL_4056|M.ulcerans_Agy99 VLVSVRVTVADID-GVNKPSMPYRLRVIVHEDDTGRMTGYDLKYPDGGN MAV_0663|M.avium_104 VLVSVRVTVADID-GVNKPSMPYRLRVIVHEDDAGRMTGYDLKYPDGGN TH_2239|M.thermoresistible__bu VLVSVRVTVTDID-GVNKPSQPYRMRVIVSEDDDGNMTGYDLMYPDGGN MAB_4147c|M.abscessus_ATCC_199 ILISARVTLTNADSGVNEPSKSYRMRMIVAEDQQGNMTAYDLRWPDGQS :*:*. **::: * * * *: .**:*:*: **: *.**.*** :*** .