For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AGCCAAATALAVVLAPAAAADPAALDPTGNYSGGPVPTMNGIPCVGGSLGVCISMRQSNPSRSGATPPRA NVGHSPTVRR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5740 | - | - | 100% (81) | hypothetical protein MSMEG_5740 |
M. smegmatis MC2 155 | MSMEG_5887 | - | 4e-07 | 35.09% (57) | intersectin-EH binding protein Ibp1 |
M. smegmatis MC2 155 | MSMEG_5889 | - | 6e-05 | 38.46% (52) | hypothetical protein MSMEG_5889 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_4371 | - | 2e-16 | 51.22% (82) | PUTATIVE - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_5740|M.smegmatis_MC2_155 ---------------------------------MAGCCAAATALAVVLAP TH_4371|M.thermoresistible__bu LPVRPLPILTVGDDPRPPAPAVEPRVLRPDPAERAPDPAXXXVIAAVQAA * * .:*.* *. MSMEG_5740|M.smegmatis_MC2_155 AAAADPAALDPTGNY-------SGGPVPTMNGIPCVGGSLGVCISMRQSN TH_4371|M.thermoresistible__bu AAPVDPAG-DPQPGYNGAPTVISGKPVPTLNGVPCVGGNLGVCVGFAQNQ **..***. ** .* ** ****:**:*****.****:.: *.: MSMEG_5740|M.smegmatis_MC2_155 PSRSGATPPRANVGHSPTVRR TH_4371|M.thermoresistible__bu PR---PTTPRTSVGHSPTVR- * .*.**:.********