For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
IRIWVVNPNTTASMTEGIGRCANAVAGPGTEITAVTSRSGPPSIESHYDEAMSVPGLLDAIASGEQAGAD GYVVACFGDPGLDAAREVATGPVIGIAEAAMHTASHLGRGFSVVTTLARTTGRAAELAERYGMQRFCLGI HACEIPVLDLETDPTAQKVVTEACRDAVERDGSDAIVLGCAGMAEMCRAISAEVGVPVVDGVTAATLTVQ SLVTMGLTTGKRGEYAPPPPKQYL*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_5729 | - | - | 100% (235) | hydantoin racemase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3171 | - | 5e-42 | 39.91% (233) | Asp/Glu racemase |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2934 | - | 2e-85 | 65.24% (233) | Asp/Glu racemase |
| M. marinum M | MMAR_4457 | - | 1e-108 | 81.03% (232) | hydantoin racemase |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_4626 | - | 1e-107 | 80.17% (232) | hydantoin racemase |
| M. vanbaalenii PYR-1 | Mvan_0933 | - | 1e-115 | 85.84% (233) | Asp/Glu racemase |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_5729|M.smegmatis_MC2_155 --------------MIRIWVVNPNTTASMTEGIGRCANAVAGPGTEITAV
Mvan_0933|M.vanbaalenii_PYR-1 ---------------MRIWVVNPNTTETMTAGIARCVSALAGPTTEITAV
MMAR_4457|M.marinum_M MRITPIRCLGARLAVLRIWVINPNTTESMTSAIGRCARAVAGPGTEITAV
MUL_4626|M.ulcerans_Agy99 --------------MLRIWVINPNTTESMTTAIGRCARAVAGPGTEITAV
MAB_2934|M.abscessus_ATCC_1997 ---------------MRIRVINPNTTEAMTKSIAAAAQSAAWAQTSVTAV
Mflv_3171|M.gilvum_PYR-GCK ---------------MRILVANVNTTASMTEAIAESARGVAAEGTEIVGI
:** * * *** :** .*. .. . * *.:..:
MSMEG_5729|M.smegmatis_MC2_155 TSRSGPPSIESHYDEAMSVPGLLDAIASGEQAGADGYVVACFGDPGLDAA
Mvan_0933|M.vanbaalenii_PYR-1 TSRFGPPSIESHYDEAMSVPGLLDAIGSGEQTGVDGYVIACFGDPGLDAA
MMAR_4457|M.marinum_M TSPIGPPSIESHYDEAMSVPGLLQAIEQGEHSGADGYVIACFGDPGLDAA
MUL_4626|M.ulcerans_Agy99 TSPIGPPSIESHYDEAMSVPGLLQAIEQGEHSGADGYVIACFGDPGLDAA
MAB_2934|M.abscessus_ATCC_1997 NPSMGPASIESHYDEALSVPGILAEIRRAESEGTDGYVLACFGDPGLDAA
Mflv_3171|M.gilvum_PYR-GCK TPRFGADSCEGNFESYLAAIAVMDAVT-AYPEPFDAVIQAGYGEHGREGL
.. *. * *.:::. ::. .:: : . *. : * :*: * :.
MSMEG_5729|M.smegmatis_MC2_155 REVATGPVIGIAEAAMHTASHLGRGFSVVTTLARTTGRAAELAERYGMQR
Mvan_0933|M.vanbaalenii_PYR-1 REIAAGPVIGIAEAAMHTASHLGRGFSVVTTLARTTGRAAELAQRYGMQR
MMAR_4457|M.marinum_M RELARGPVIGIAEAAMHTASHLGRGFSVVTTLARTTGRAAELAERYGMDR
MUL_4626|M.ulcerans_Agy99 RELARGPVIGIAEAAMHTASHLGRGFSVVTPLARTTGRAAELAERYGMDR
MAB_2934|M.abscessus_ATCC_1997 RELATGPVLGIAEAAMHTASHLGRGFSVVTTLERTAGRAWDLAERYGMSR
Mflv_3171|M.gilvum_PYR-GCK QELLDVPVVDITEAAASTAMYLGHKYSVVTTLDRTVPLIEDRLKLAGLDA
:*: **:.*:*** ** :**: :****.* **. : : *:.
MSMEG_5729|M.smegmatis_MC2_155 FCLGIHACEIPVLDLETDP-TAQKVVTEACRDAVERDGSDAIVLGCAGMA
Mvan_0933|M.vanbaalenii_PYR-1 FCLGIHACEIPVLDLETDP-SAVKAVTEACRRAVDHDGSDAVVLGCAGMA
MMAR_4457|M.marinum_M FCLGVHACEIPVLDLETDS-RARAIVTDACRTAIKADRSDSIVLGCAGMA
MUL_4626|M.ulcerans_Agy99 FCLGVHACEIPVLDLETDS-RARAIVTDACRTAIKVDRSDSIVLGCAGMA
MAB_2934|M.abscessus_ATCC_1997 FCRGVHGCDIAVLDLEQNP-RTRDILVEHCRRAAHDDGSDVIVLGCAGMA
Mflv_3171|M.gilvum_PYR-GCK RCASVRASGLAVLELESDPARAVEAIVRQAREAVENDHAEVICLGCGGMA
* .::.. :.**:** :. : :. .* * . * :: : ***.***
MSMEG_5729|M.smegmatis_MC2_155 EMCRAISAEVGVPVVDGVTAATLTVQSLVTMGLTTGKRGEYAPPPPKQYL
Mvan_0933|M.vanbaalenii_PYR-1 EMCRVIADEIGVPVVDGVTAATLTVQSLVTMGLSTCKRGEYATPPEKVYT
MMAR_4457|M.marinum_M DMCHSISEEIGVPVVDGVSAATALVQSLVTLGLRTAKHGEYASPPKK---
MUL_4626|M.ulcerans_Agy99 DICHSISEEIGVPVVDGVSAATVLVQSLVTLGLRTAKHGEYASPPKK---
MAB_2934|M.abscessus_ATCC_1997 RLCRDISGEIGLPVIDGVTAAVNLVQSLVSMGLRKSGHGEFAAPPIKPYA
Mflv_3171|M.gilvum_PYR-GCK ELEEKVRAATGVPIVDGVRSAVTIAEGLVRMGLSTSKVRTYATPREKKVT
: . : *:*::*** :*. .:.** :** . :*.* *
MSMEG_5729|M.smegmatis_MC2_155 ------------
Mvan_0933|M.vanbaalenii_PYR-1 ------------
MMAR_4457|M.marinum_M ------------
MUL_4626|M.ulcerans_Agy99 ------------
MAB_2934|M.abscessus_ATCC_1997 GLLDSFGSVPAG
Mflv_3171|M.gilvum_PYR-GCK GWPFRL------