For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TKGNPLTEFFATPGYGPWLRENLHYSQALRIGDRVEISGQGGWDDDINFPADLEDEIVRAFDNVERTLAT AGAGWPDVVSVNSYHVPTAPDTIGDDHTRVMVEQFRKRMGDRAPIWTQIGVPALGVPGMRVEIRVTAVIE SA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_5723 | - | - | 100% (143) | endoribonuclease L-psp family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2723 | - | 1e-06 | 33.05% (118) | hypothetical protein Mb2723 |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv2704 | - | 1e-06 | 33.05% (118) | hypothetical protein Rv2704 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2910c | - | 2e-05 | 30.00% (120) | hypothetical protein MAB_2910c |
| M. marinum M | MMAR_2009 | - | 1e-06 | 31.93% (119) | hypothetical protein MMAR_2009 |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2723|M.bovis_AF2122/97 ---MSASRTMVSS---GSEFESAVGYSRAVRIGPLVVVAGTTGSG-----
Rv2704|M.tuberculosis_H37Rv ---MSASRTMVSS---GSEFESAVGYSRAVRIGPLVVVAGTTGSG-----
MMAR_2009|M.marinum_M MTRMSTSRTIISS---ESDFESAVGYSRAVRIGPHVAVAGTTGNGPA---
MAB_2910c|M.abscessus_ATCC_199 ------MKIQIET---NAAPDPVGAYSQAVRIGDTLQVSGQVGIDPHTES
MSMEG_5723|M.smegmatis_MC2_155 MTKGNPLTEFFATPGYGPWLRENLHYSQALRIGDRVEISGQGGWDDDIN-
. : . **:*:*** : ::* * .
Mb2723|M.bovis_AF2122/97 ---DDIAAQTRDALRRIEIALGQAGATLADVVRTRIYVTDIS-------R
Rv2704|M.tuberculosis_H37Rv ---DDIAAQTRDALRRIEIALGQAGATLADVVRTRIYVTDIS-------R
MMAR_2009|M.marinum_M ---GDIAAQTRDALRRIEVALTDAGASLADVIRTRIYVTDIS-------R
MAB_2910c|M.abscessus_ATCC_199 LVGGTVYAQTLQALRNVQAILTAAGADFEDVLMLRVFLNAPE-------G
MSMEG_5723|M.smegmatis_MC2_155 -FPADLEDEIVRAFDNVERTLATAGAGWPDVVSVNSYHVPTAPDTIGDDH
: : *: .:: * *** **: . :
Mb2723|M.bovis_AF2122/97 WREVGEVHAQAFGKIRPVTSMVEVTALIAPGLLVEIEADAYVGSAVADRN
Rv2704|M.tuberculosis_H37Rv WREVGEVHAQAFGKIRPVTSMVEVTALIAPGLLVEIEADAYVGSAVADRN
MMAR_2009|M.marinum_M WREVGDVHAQVFGHIRPVATMVEVSALIAPDLLVEIEADAYVQSPGGQPS
MAB_2910c|M.abscessus_ATCC_199 FAELNQAFADYLQKPYPAR--TTLFGGLPPGLLVEIDALAKISAARQ---
MSMEG_5723|M.smegmatis_MC2_155 TRVMVEQFRKRMGDRAPIWTQIGVPALGVPGMRVEIRVTAVIESA-----
: : . . : . * : . *.: *** . * : :.
Mb2723|M.bovis_AF2122/97 SGAGPKDPSPAGG
Rv2704|M.tuberculosis_H37Rv SGAGPKDPSPAGG
MMAR_2009|M.marinum_M PETDPKVPSGPGR
MAB_2910c|M.abscessus_ATCC_199 -------------
MSMEG_5723|M.smegmatis_MC2_155 -------------