For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VPTPHAAEIVLSADERAELEGWARRRTSAAGLAMRARIVLAAADGGSNTELADRLELSIGTVRRWRNRFA ELRLDGLVDEPRPGRPRVVGDEQIEALITATLETTPPDATHWSTRSMAAHLGLSQSMVSRVWRAFGLAPH KQDSWKLSKDPLFVAKVRDVVGLYLNPPERALVLCVDEKTQIQALNRTQPVFPMLPGTPARASHDYVRHG TSSLYAALDLTTGKVIGALHSRHRATEFLAFLKKIDVEVPDDLDVHLVLDNASTHKTPAVKRWLTGHPRF VLHFTPTSSSWLNLVERWFAELTTKKLRRSTHTSVRQLNADIRAWIDTWNDNPKPYVWTKTADQILASIA NYCARINDSGH
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5669 | - | - | 100% (361) | ISMsm2, transposase |
M. smegmatis MC2 155 | MSMEG_4522 | - | 0.0 | 100.00% (361) | ISMsm2, transposase |
M. smegmatis MC2 155 | MSMEG_3510 | - | 0.0 | 100.00% (361) | ISMsm2, transposase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_1425 | - | 6e-12 | 56.36% (55) | transposase for insertion sequence |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_5669|M.smegmatis_MC2_155 MPTPHAAEIVLSADERAELEGWARRRTSAAGLAMRARIVLAAADGGSNTE MMAR_1425|M.marinum_M -------------------------------------------------- MSMEG_5669|M.smegmatis_MC2_155 LADRLELSIGTVRRWRNRFAELRLDGLVDEPRPGRPRVVGDEQIEALITA MMAR_1425|M.marinum_M -------------------------------------------------- MSMEG_5669|M.smegmatis_MC2_155 TLETTPPDATHWSTRSMAAHLGLSQSMVSRVWRAFGLAPHKQDSWKLSKD MMAR_1425|M.marinum_M -------------------------------------------------- MSMEG_5669|M.smegmatis_MC2_155 PLFVAKVRDVVGLYLNPPERALVLCVDEKTQIQALNRTQPVFPMLPGTPA MMAR_1425|M.marinum_M -------------------------------------------------- MSMEG_5669|M.smegmatis_MC2_155 RASHDYVRHGTSSLYAALDLTTGKVIGALHSRHRATEFLAFLKKIDVEVP MMAR_1425|M.marinum_M -------------------------------------------------- MSMEG_5669|M.smegmatis_MC2_155 DDLDVHLVLDNASTHKTPAVKRWLTGHPRFVLHFTPTSSSWLNLVERWFA MMAR_1425|M.marinum_M ----MHLILNHDATHKHSAVRVWLDGRPRLHLDAVAASSSWLDLVDRWLR :**:*:: :*** .**: ** *:**: *. ..:*****:**:**: MSMEG_5669|M.smegmatis_MC2_155 ELTTKKLRRSTHTSVRQLNADIRAWIDTWNDNPKPYVWTKTADQILASIA MMAR_1425|M.marinum_M ELTEKALRRVAFHSMP---------------------------------- *** * *** :. *: MSMEG_5669|M.smegmatis_MC2_155 NYCARINDSGH MMAR_1425|M.marinum_M -----------