For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VKKSVTAGTAVLAAGAIALGPVVSQAPEAQRAMRAADLALSAAANPIEAAAFIVEGFGTSGVRLVQGALT APLGLIPLVEALGAQDSEALYSVLREYNDAPLWVADPTIDGFAEALPRWLGGGTDGDRYVNSSEDGAIID FRDNVLWVATDNARTQINNALHVDAGPPANLFEGAVTLSVGAGGTAVRLVEGAALAPFGLIPVAQGLATS ATTGDNTALYVAVRQYIDAPLWVADPAIDSVAKVLPRSLGGGTDGNHNVSSDLDGAVVKFRDNALWGATN AVRTAVADVLNVNPNAGNVPAAPLAASPKKANVAGSVNLGKFLPGASAPEGATKTRPGRAALGALRNQVR ASVAKVNADINAAVKKVTSGLPAKKAAAKEKKAATSEKAAEGSED
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5131 | - | - | 100% (395) | hypothetical protein MSMEG_5131 |
M. smegmatis MC2 155 | MSMEG_5322 | - | 9e-07 | 25.66% (417) | hypothetical protein MSMEG_5322 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_3426 | - | 8e-17 | 27.40% (281) | PUTATIVE - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_5131|M.smegmatis_MC2_155 MKKSVTAGTAVLAAGAIALGPVVSQAPEAQRAMRAADLALSA-------- TH_3426|M.thermoresistible__bu ----VTSGVAIVGAGIIATPSLITAPPADILVRADANTSHAVNLAADADA **:*.*::.** ** .::: .* . *: : :. MSMEG_5131|M.smegmatis_MC2_155 -----------------------------------------AANPIEAAA TH_3426|M.thermoresistible__bu LQLQEQFDALLAATDLIERIQQAVGYIIEAGFGSGFDPHESADDPIDGTF * :**:.: MSMEG_5131|M.smegmatis_MC2_155 FIVEGFGTSGVRLVQGALTAPLGLIPLVEALG--AQDSEALYSVLREYND TH_3426|M.thermoresistible__bu RLIEGFGASAVRTARGAALLPLGVIAALQAVAEGGDPAEALAQFIRQVID ::****:*.** .:** ***:*. ::*:. .: :*** ..:*: * MSMEG_5131|M.smegmatis_MC2_155 APLWVADPTIDGFAEALPRWLGG--------------------------- TH_3426|M.thermoresistible__bu GPGWAVNPILYALRDTLIVPLGGDPGFFADVQFGLAQAGTALGDVIVALL .* *..:* : .: ::* *** MSMEG_5131|M.smegmatis_MC2_155 -------------------------GTDGDRYVNSSED------------ TH_3426|M.thermoresistible__bu GLDDSDVIGRIQEAVDRIFSDGFGSGFDQHESADDPVDGMFRLIEGVGAS * * .. .:.. * MSMEG_5131|M.smegmatis_MC2_155 -------------------------------------------------- TH_3426|M.thermoresistible__bu LIRTLSGLALLPLGLLSVPAALLSGDDPRVALAEFIRNTVDGPSWAVNPI MSMEG_5131|M.smegmatis_MC2_155 ----------------GAIIDFRDNVLWVATDN----------------- TH_3426|M.thermoresistible__bu LFALRDSLIEPLGGQPGVFADIQNQLQSVSKQIGNTIVDLLGLPTVSTMA *.: *::::: *:.: MSMEG_5131|M.smegmatis_MC2_155 ARTQINNALHVDAG-----------------------PPANLFEGAVTLS TH_3426|M.thermoresistible__bu AGAAASDAMSVDPLTRALEAIDYIVDKGFGSGFEGHRPAEDVVDGFFRLT * : .:*: **. *. ::.:* . *: MSMEG_5131|M.smegmatis_MC2_155 VGAGGTAVRLVEGAALAPFGLIPVAQGLATSATTGDNTALYVAVRQYIDA TH_3426|M.thermoresistible__bu EGFGAAAVRTVYGAALLPLGLIDVAASVVDGGDT--RAALADFITQTVHG * *.:*** * **** *:*** ** .:. .. * .:** : * :.. MSMEG_5131|M.smegmatis_MC2_155 PLWVADPAIDSVAKVLPRSLGGGT-------DGNHNVSSDLDGAVVKFR- TH_3426|M.thermoresistible__bu PSWAINPVLFALRDALIEPLGGKTGVFADVQNRLQSASKDVGAAIVSLLG * *. :*.: :: ..* ..*** * : :..*.*:..*:*.: MSMEG_5131|M.smegmatis_MC2_155 -DNALWGATNAVRTAVADVLNVNPNAGNVPAAPLAASPKKANVAGSVNLG TH_3426|M.thermoresistible__bu LDAAAAEGNSTGSQNVLRTAGERNEPGQAGAMRFAQDGPTALPGGGETLV * * ...: * . . . :.*:. * :* . .* .*. .* MSMEG_5131|M.smegmatis_MC2_155 KFLPGASAPEGATKTRPGRAALGALRNQVRASVAKVNADIN--------- TH_3426|M.thermoresistible__bu VESPAADGLKQEQPDKPKIEHRKVEKRELRTGLLPTPVDLGTHRQPQRAQ *.*.. : :* . :.::*:.: . .*:. MSMEG_5131|M.smegmatis_MC2_155 --AAVKKVTSGLPAKKAAAKEKKAATSEKAAEGSED-------------- TH_3426|M.thermoresistible__bu TPVELQQKPGGVKVDRNHKRFTKFTTHESGSPQGASSEAPSSPDRSNDKP . ::: ..*: ..: : .* :* *..: . . MSMEG_5131|M.smegmatis_MC2_155 ---- TH_3426|M.thermoresistible__bu TTKK