For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTTAIPPVVDLETWRAALGDLRRREKAATRELDAIAAARRRLPMVELPEYTLVGADGPVRLADIFAGRSQ LITYHHMWTDGAEWQCGGCTGYTSQFTRLDFLDNYDARFVVVTNGPIDEALRYRAKVGNMMEWYSSSESS FGADVDAAPGEGFAVNVFLRVPDPAGDPDSDPKKDKVYRTWHTNGRGTEQLSHTFALIDLLPYGRQEQWQ DSPQGWPKHPTYSGWLDSPDIARLYGEKVQA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4743 | - | - | 100% (241) | hypothetical protein MSMEG_4743 |
M. smegmatis MC2 155 | MSMEG_4966 | - | 9e-38 | 37.97% (237) | CalU12 protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3255 | - | 1e-109 | 78.97% (233) | protein of unknown function DUF899, thioredoxin family protein |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2013c | - | 3e-32 | 35.40% (226) | hypothetical protein MAB_2013c |
M. marinum M | MMAR_2919 | - | 2e-97 | 71.61% (236) | hypothetical protein MMAR_2919 |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_0930 | arcA | 3e-72 | 75.78% (161) | PROBABLE ARGININE DEIMINASE ARCA (ADI) (AD) (ARGININE |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_2972 | - | 1e-110 | 76.79% (237) | protein of unknown function DUF899, thioredoxin family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3255|M.gilvum_PYR-GCK ----------------------MTEN---------AAMPPIVGADVWRAA Mvan_2972|M.vanbaalenii_PYR-1 ----------------------MTET---------SALPPVVDSRTWREA MSMEG_4743|M.smegmatis_MC2_155 ------------------------MT---------TAIPPVVDLETWRAA TH_0930|M.thermoresistible__bu LGLDSEVGRLRVIIVHRPGAELMRLTPQNSDALLFDGLPWVSKAQEEHDE MMAR_2919|M.marinum_M ------------------------MA---------KALPASVDHLTWRAA MAB_2013c|M.abscessus_ATCC_199 -----------------------------------MKTPAIVSAQEWETA * . Mflv_3255|M.gilvum_PYR-GCK LDDLRARE----------------KAATRELDAIAAQR--RRL------- Mvan_2972|M.vanbaalenii_PYR-1 LDELRKRE----------------KAATRELDAIAAQR--RRL------- MSMEG_4743|M.smegmatis_MC2_155 LGDLRRRE----------------KAATRELDAIAAAR--RRL------- TH_0930|M.thermoresistible__bu FTALLRSRGVEVLLLADLLTEALGHSGAARMHGIGAAVDPRRLGIPLSQE MMAR_2919|M.marinum_M LDELRERE----------------KAATRELDAIAAQR--RRL------- MAB_2013c|M.abscessus_ATCC_199 HRAMLVEE----------------KALTRARDALAAKR--RRMP------ : . :: : ..:.* **: Mflv_3255|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_2972|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_4743|M.smegmatis_MC2_155 -------------------------------------------------- TH_0930|M.thermoresistible__bu LSSYLRTLEPAELAHVLIAGMTFDELPFGPGELSLVRRMHHGGDFVIEPL MMAR_2919|M.marinum_M -------------------------------------------------- MAB_2013c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_3255|M.gilvum_PYR-GCK --------------PMVQMPDYTLIGADGPVRLADIFDGRS--------- Mvan_2972|M.vanbaalenii_PYR-1 --------------PMVQMPDYTLIGADGPIRLADIFAGRS--------- MSMEG_4743|M.smegmatis_MC2_155 --------------PMVELPEYTLVGADGPVRLADIFAGRS--------- TH_0930|M.thermoresistible__bu PNLVFTRDSSFWIGPRVAITSLALPARSRETSLTDVIYAHHPRFLGVRRA MMAR_2919|M.marinum_M --------------PMVRLADYTLIGADGPVRLVDVFDGRA--------- MAB_2013c|M.abscessus_ATCC_199 --------------WTEVDTSYRFEGPDGAVSLLDLFQGRR--------- .. : . . * *:: .: Mflv_3255|M.gilvum_PYR-GCK -----------QLIVYNHMWTDG----AEWQCGGCTGYTSQFTRLDFLAN Mvan_2972|M.vanbaalenii_PYR-1 -----------QLIVYNHMWSDG----AEWQCGGCTGYTSQFTRLDFLDN MSMEG_4743|M.smegmatis_MC2_155 -----------QLITYHHMWTDG----AEWQCGGCTGYTSQFTRLDFLDN TH_0930|M.thermoresistible__bu YESRSAPVEGGDVLLXXHMWADG----AEWQCGGCTWFTSQFTRLEFLDN MMAR_2919|M.marinum_M -----------QLIVYHHMWTDG----AEWQCGGCTGFTSQFTRLEFLAH MAB_2013c|M.abscessus_ATCC_199 -----------QLIVYRAFVDPGTGDWPEHGCIGCSLMADHIGNLAHLNA ::: : * .* * **: :.:: .* .* Mflv_3255|M.gilvum_PYR-GCK YDARFVIVTAGPIEEALAYREKVGNTMEWYSSS-ESPFAADVDAAPGTGF Mvan_2972|M.vanbaalenii_PYR-1 YDARFVIVTSGPIEEALAYRTKVGNTMEWYSSA-QSPFAADVDAAPNTGF MSMEG_4743|M.smegmatis_MC2_155 YDARFVVVTNGPIDEALRYRAKVGNMMEWYSSS-ESSFGADVDAAPGEGF TH_0930|M.thermoresistible__bu YDARFVVVTNGPIDEALAYREKVGNRMAWYSSA-DSPFGADVDAPPGGGF MMAR_2919|M.marinum_M YDARFVIVTTGPINDALAYKHKVGNRMPWYSSS-ESSFAADLDAPAGGGF MAB_2013c|M.abscessus_ATCC_199 RDTTLVYVSRGRQTDLQRIKTRMGWQIPWYTMVPESSFDRDFGVQDWHGH *: :* *: * : : ::* : **: :*.* *... *. Mflv_3255|M.gilvum_PYR-GCK AVNVFLRCAGPSGD--------TVFRTWHTNGRGTEQLSHTFPLIDILPW Mvan_2972|M.vanbaalenii_PYR-1 AVNVFLR----DGD--------TVYRTWHTNGRGTEQLSYTFPLIDVLPW MSMEG_4743|M.smegmatis_MC2_155 AVNVFLRVPDPAGDPDSDPKKDKVYRTWHTNGRGTEQLSHTFALIDLLPY TH_0930|M.thermoresistible__bu AVNVFLRATAADGT-------DAVFRTWHTDGRGTEQLSHVFALLDILPW MMAR_2919|M.marinum_M AVNVLLR----DGD--------TVYRTWHTTGRGTEQLSYMFGLIDLLPW MAB_2013c|M.abscessus_ATCC_199 NAFIRDRD--------------RVYRTYFINNRGDEAFNNTWTFLDMTAL . : * *:**:. .** * :. : ::*: . Mflv_3255|M.gilvum_PYR-GCK GRQEVWQDSPDGWPQSPTY--------------SKWLDSPDVARLYGS-- Mvan_2972|M.vanbaalenii_PYR-1 GRQEEWQDSPEGWPQRPTY--------------SGWLDSPDIARVYGPR- MSMEG_4743|M.smegmatis_MC2_155 GRQEQWQDSPQGWPKHPTY--------------SGWLDSPDIARLYGEKV TH_0930|M.thermoresistible__bu GRQEEWQDSPDGWPRWPTY--------------SGWPDSPDIARWYGPAP MMAR_2919|M.marinum_M GRQEQWQDSPAGWPSRPTY--------------SGWLGSREIALAYGPGD MAB_2013c|M.abscessus_ATCC_199 GRQETWEDSPEGYPQSPAYEWWDWHDQYGTHEPSRWFGEPDPDDPYDPRP **** *:*** *:* *:* * * .. : *. Mflv_3255|M.gilvum_PYR-GCK ----- Mvan_2972|M.vanbaalenii_PYR-1 ----- MSMEG_4743|M.smegmatis_MC2_155 QA--- TH_0930|M.thermoresistible__bu R---- MMAR_2919|M.marinum_M TAGP- MAB_2013c|M.abscessus_ATCC_199 TKACH