For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTATSTPIGPVDASKVPRFAGPATFARLPRLDQVTKADVVIAGVPFDTGVSYRPGARFGPTHVRESSRLL RPYNPGLDVSPFEVVQVADAGDIAVNPFNIHEAIETIEGAARDITADGKKLVTIGGDHTIALPLLRAAAA KHGPVALVHFDAHLDTWDTYFGAEYTHGTPFRRAVEEGILDTEALSHVGTRGPLYGKKDLEDDRRFGFGI VTSSDVYYQGVREVVDKLRQRVGNRPVYLSIDIDVLDPAHAPGTGTPEAGGMTSRELLEILRGFRGLNLV GADVVEVAPAYDHAEMTGVAAAHVAYDLVSLLALGPDEA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4459 | speB | - | 100% (319) | agmatinase |
M. smegmatis MC2 155 | MSMEG_4374 | speB | e-110 | 60.93% (302) | agmatinase |
M. smegmatis MC2 155 | MSMEG_1072 | speB | e-109 | 60.51% (314) | agmatinase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_0797 | - | 1e-108 | 60.06% (313) | putative agmatinase |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_3257 | - | 6e-43 | 35.01% (337) | PUTATIVE putative agmatinase |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0161 | - | 1e-165 | 88.82% (313) | putative agmatinase |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_4459|M.smegmatis_MC2_155 ----------------------MTATSTPIGPVDASKVPRFAGPATFARL Mvan_0161|M.vanbaalenii_PYR-1 ----------MNEREAQRD---RTSTPPPVGPVDASKTPRFAGPATFARL Mflv_0797|M.gilvum_PYR-GCK MQRRFDAGTGMSEESSVQNDPRMQSASGVLGQIDAQQVPRYAGFGTFARL TH_3257|M.thermoresistible__bu -----------VWRQPVDRSRDPHREPGPINLQRHQFTPAYSGIATLFGL . :. . .* ::* .*: * MSMEG_4459|M.smegmatis_MC2_155 PRLDQVT-----KADVVIAGVPFDTGVSYRPGARFGPTHVRESSRLLRP- Mvan_0161|M.vanbaalenii_PYR-1 PRLDQVP-----RADVAVVGVPFDSGVSYRPGARFGPTHVREASRLLRP- Mflv_0797|M.gilvum_PYR-GCK PQRHEVP-----GHDIAVIGVPFDSGVTYRPGARFGPAAIRQASRLLKP- TH_3257|M.thermoresistible__bu PLCLNQDDLRAGAVDVAVVGAPVDVSLGHR-GAAYGPRAIRADERVLPHT * : *:.: *.*.* .: :* ** :** :* .*:* MSMEG_4459|M.smegmatis_MC2_155 ----YNPGLDVSPFEVVQVADAGDIAVNPFNIHEAIETIEGAARDITAD- Mvan_0161|M.vanbaalenii_PYR-1 ----YHPALDVSPFEIAQVADAGDIAVNPFNIHEAIETIEAAAVDLTRD- Mflv_0797|M.gilvum_PYR-GCK ----YNPALEVAPFATAQVVDAGDIAANPFDITEAVDQIKDGILGLVTRP TH_3257|M.thermoresistible__bu PTMLINDSTRVKPFEVLNVVDYGDAAVDPLSIENSMGPIRELVRDVAEV- : . * ** :*.* ** *.:*:.* ::: *. .:. MSMEG_4459|M.smegmatis_MC2_155 GKKLVTIGGDHTIALPLLRAAAAKHGP--VALVHFDAHLDTWDTYFGAEY Mvan_0161|M.vanbaalenii_PYR-1 GTSLVTIGGDHTIALPLLRAAHATHGP--VALVHFDAHLDTWDTYFGAEY Mflv_0797|M.gilvum_PYR-GCK EQRFVLLGGDHTIALPALQAVNELHGP--VALVHFDAHLDTWDTYFGAPC TH_3257|M.thermoresistible__bu GAVPLVLGGDHSILWPNAAAIADVYGAGKVGVVHFDAHPDCADDVVGHHA : :****:* * * :*. *.:****** * * .* MSMEG_4459|M.smegmatis_MC2_155 THGTPFRRAVEEGILDTEALSHVGTRGPLYGKKDLEDDRR-FGFGIVTSS Mvan_0161|M.vanbaalenii_PYR-1 THGTPFRRAVEEGILDTEALSHVGTRGPLYGKKDLEDDRR-FGFGIVTSS Mflv_0797|M.gilvum_PYR-GCK THGTPFRRASEQGLIVKGHSAHVGIRGSLYDSADLLDDAE-LGFTAVRCR TH_3257|M.thermoresistible__bu SHGTPIRRLIDDEHIPGRNFIQVGLRSAIAPDEELFAWMRDNGLRTHFMA :****:** :: : :** *..: . :* . *: MSMEG_4459|M.smegmatis_MC2_155 DVYYQGVREVVDKLRQRVGNRP--VYLSIDIDVLDPAHAPGTGTPEAGGM Mvan_0161|M.vanbaalenii_PYR-1 DVYYQGVREIVDKLRQRLGDRP--VYLSVDIDVLDPAHAPGTGTPEAGGM Mflv_0797|M.gilvum_PYR-GCK DIDRIGVDGVIERVLERVGDHP--VYVSIDIDVLDPAFAPGTGTPEIGGM TH_3257|M.thermoresistible__bu EIDRRGFHTVLQDAIDEALDGPEYLYLSIDIDVLDPAYAPGTGTPEPPGL :: *. ::: :. : * :*:*:********.******** *: MSMEG_4459|M.smegmatis_MC2_155 TSRELLEILRGFRGLN-LVGADVVEVAPAYDHAEMTGVAAAHVAYDLVSL Mvan_0161|M.vanbaalenii_PYR-1 TSRELLEILRGFVGLN-VIGADVVEVSPAYDHAEITGVAASHVAYDLVSL Mflv_0797|M.gilvum_PYR-GCK TSRELVAVLRAMRALD-IVGADVVEVAPSYDHAEVTAVAAANLAYELISL TH_3257|M.thermoresistible__bu TNRELLPAIRRICHETPVVGLEIVEVAPHLDPGYTTTMNARRVIFEALTG *.***: :* : ::* ::***:* * . * : * .: :: :: MSMEG_4459|M.smegmatis_MC2_155 LALGPDEA------------------ Mvan_0161|M.vanbaalenii_PYR-1 LAMRAEASR----------------- Mflv_0797|M.gilvum_PYR-GCK MVG----------------------- TH_3257|M.thermoresistible__bu LAMRRLGLPGPDYLHPDVAGPPSNRV :.