For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTTTSTRIHTGVGAHIATGYADAIAVPSAGTTIYVSGTPGLREDGTTPEDFTEEARQCWANVEAALTKAG AALTDIVYMRQWLTSRDNVSAYMAVSGDVIRHRPAAMLTIVTGLVWPSIHVEVEVVAVLPA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_4424 | - | - | 100% (131) | endoribonuclease L-PSP |
| M. smegmatis MC2 155 | MSMEG_3782 | - | 2e-05 | 29.07% (86) | endoribonuclease L-PSP, putative |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2723 | - | 4e-08 | 28.24% (131) | hypothetical protein Mb2723 |
| M. gilvum PYR-GCK | Mflv_3942 | - | 3e-10 | 33.07% (127) | endoribonuclease L-PSP |
| M. tuberculosis H37Rv | Rv2704 | - | 4e-08 | 28.24% (131) | hypothetical protein Rv2704 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3017 | - | 7e-09 | 31.93% (119) | hypothetical protein MAB_3017 |
| M. marinum M | MMAR_2009 | - | 5e-09 | 31.25% (128) | hypothetical protein MMAR_2009 |
| M. avium 104 | MAV_3598 | - | 9e-09 | 35.45% (110) | endoribonuclease L-PSP |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_3344 | - | 9e-08 | 29.69% (128) | hypothetical protein MUL_3344 |
| M. vanbaalenii PYR-1 | Mvan_2457 | - | 8e-07 | 31.01% (129) | endoribonuclease L-PSP |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2723|M.bovis_AF2122/97 ----------------MSASRTMVSSGSEFESAVGYSRAVRI---GPLVV
Rv2704|M.tuberculosis_H37Rv ----------------MSASRTMVSSGSEFESAVGYSRAVRI---GPLVV
MMAR_2009|M.marinum_M -------------MTRMSTSRTIISSESDFESAVGYSRAVRI---GPHVA
MUL_3344|M.ulcerans_Agy99 ----------------MSTSRTIISSESDFESAVGYSRAVRI---GPHVA
MAV_3598|M.avium_104 ----------------------MVQSDSAFESDVGYARAVRV---GPHVW
Mvan_2457|M.vanbaalenii_PYR-1 --------MSHRAYFVTVTQRMNISSGSPFEAEVGYSRAVRV---GPHVA
MAB_3017|M.abscessus_ATCC_1997 ------------------MGRFRISSDGEWEAAVGYSRAVRV---GAHIA
Mflv_3942|M.gilvum_PYR-GCK MPHLRMSLLRPGRTLRPVAERINVSSGSEFEAAVGYSRAVRV---GAHVF
MSMEG_4424|M.smegmatis_MC2_155 ----------------MTTTSTRIHTGVGAHIATGYADAIAVPSAGTTIY
: : . .**: *: : *. :
Mb2723|M.bovis_AF2122/97 VAGTTGSG--------DDIAAQTRDALRRIEIALGQAGATLADVVRTRIY
Rv2704|M.tuberculosis_H37Rv VAGTTGSG--------DDIAAQTRDALRRIEIALGQAGATLADVVRTRIY
MMAR_2009|M.marinum_M VAGTTGNGP------AGDIAAQTRDALRRIEVALTDAGASLADVIRTRIY
MUL_3344|M.ulcerans_Agy99 VAETTGNGP------AGDIAAQTRDALRRIEVALTDVGASLADVIRTRIY
MAV_3598|M.avium_104 VAGTTGAGP------AGDIAAQARDALRRIEIALRQAGAELADVVRTRIY
Mvan_2457|M.vanbaalenii_PYR-1 VAGTTAPG--------AGPAAQAREALHRIEAALNQAGASLSDVVRTRIY
MAB_3017|M.abscessus_ATCC_1997 VAGTTAARPNQPPAGGDDIAEQTHEVLRRIESALSQTGASLSDVVRTRIF
Mflv_3942|M.gilvum_PYR-GCK VAGTTGRG--------DSASAQARDALVRIAAALGDVGASLTDVVRTRMF
MSMEG_4424|M.smegmatis_MC2_155 VSGTPGLREDG--TTPEDFTEEARQCWANVEAALTKAGAALTDIVYMRQW
*: *.. . : :::: .: ** ..** *:*:: * :
Mb2723|M.bovis_AF2122/97 VTDISRWREVGEVHAQAFGKIRPVTSMVEVTALIAPGLLVEIEADAYVGS
Rv2704|M.tuberculosis_H37Rv VTDISRWREVGEVHAQAFGKIRPVTSMVEVTALIAPGLLVEIEADAYVGS
MMAR_2009|M.marinum_M VTDISRWREVGDVHAQVFGHIRPVATMVEVSALIAPDLLVEIEADAYVQS
MUL_3344|M.ulcerans_Agy99 VTDISRWREVGDVHAQVFGHIRPVATMVEVSALIAPDLLVEIEADAYVQS
MAV_3598|M.avium_104 VTDISRWREVGAVHAEVFGAIRPAATMVEVAALIAPELLVEIEADAYVAT
Mvan_2457|M.vanbaalenii_PYR-1 VTDISSWAEVGAVHAEFFGDIRPVTAMVEVSALISPELVVEIEADAFVGP
MAB_3017|M.abscessus_ATCC_1997 VTDISRWREVGLVHGAFFGDIRPAATMVEVSALIDPALLVEIEADAIVE-
Mflv_3942|M.gilvum_PYR-GCK VTDITAWREIGSVHDEVFGAVRPAATMVEVAALISPELVVEIEVDAIVP-
MSMEG_4424|M.smegmatis_MC2_155 LTSRDNVSAYMAVSGDVIR-HRPAAMLTIVTGLVWPSIHVEVEVVAVLPA
:*. * : **.: :. *:.*: * : **:*. * :
Mb2723|M.bovis_AF2122/97 AVADRNSGAGPKDPSPAGG
Rv2704|M.tuberculosis_H37Rv AVADRNSGAGPKDPSPAGG
MMAR_2009|M.marinum_M PGGQPSPETDPKVPSGPGR
MUL_3344|M.ulcerans_Agy99 PGGQPSPETDPKVPSGPGR
MAV_3598|M.avium_104 -GGKP--------PSGPGR
Mvan_2457|M.vanbaalenii_PYR-1 VT-----------------
MAB_3017|M.abscessus_ATCC_1997 -------------------
Mflv_3942|M.gilvum_PYR-GCK -------------------
MSMEG_4424|M.smegmatis_MC2_155 -------------------