For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TFKRMAAVIASVPALVMGLWMGVGVGFAGPAQADPVIQGVFNYNQEGLGAATWTIYPSCVPVVGDLREPL YLPVACVLHVQGSPGVSGGDAKMAGGMWQFSTNIKEGIKCSDGSWAPIVETYRFDDVALTGTREVSNTAV CGLAPAIHRFPFTLTFKEPLPIPVKTYPLDCEPWGLRLCT*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_4353 | - | - | 100% (181) | hypothetical protein MSMEG_4353 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3521 | - | 9e-24 | 35.91% (181) | hypothetical protein Mb3521 |
| M. gilvum PYR-GCK | Mflv_2762 | - | 9e-50 | 57.23% (159) | hypothetical protein Mflv_2762 |
| M. tuberculosis H37Rv | Rv3491 | - | 9e-24 | 35.91% (181) | hypothetical protein Rv3491 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2453c | - | 6e-22 | 35.54% (166) | hypothetical protein MAB_2453c |
| M. marinum M | MMAR_4979 | - | 4e-19 | 29.31% (174) | hypothetical protein MMAR_4979 |
| M. avium 104 | MAV_0665 | - | 1e-24 | 32.62% (187) | hypothetical protein MAV_0665 |
| M. thermoresistible (build 8) | TH_3818 | - | 1e-40 | 46.59% (176) | PUTATIVE putative conserved hypothetical protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_3772 | - | 1e-56 | 62.66% (158) | hypothetical protein Mvan_3772 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_4979|M.marinum_M MKIRHGLAVGAGIVS---AVALGLTLESESPAHALGPPPDGAYTLNEAGV
MAV_0665|M.avium_104 MKLRHGLAAGAAVVM---AVGTGLAVQSGQPAKAVGPPADGTYNYNEAGV
Mb3521|M.bovis_AF2122/97 MNIRCGLAAGAVICS---AVALGIALHSGDPARALGPPPDGSYSFNQAGV
Rv3491|M.tuberculosis_H37Rv MNIRCGLAAGAVICS---AVALGIALHSGDPARALGPPPDGSYSFNQAGV
MAB_2453c|M.abscessus_ATCC_199 MRTTS-LLMAPVFAT---AMGVGFAG----PAAAVAPPADGTYRMIEDGA
Mflv_2762|M.gilvum_PYR-GCK MNLLRGVAAVAVL--------AGASVATALPAAADTPVMQGDYTYVDEGR
Mvan_3772|M.vanbaalenii_PYR-1 MKLLRGLAAIVVL--------AGAAVGFSAPAQAAN-VMQGVYNYTSEGQ
MSMEG_4353|M.smegmatis_MC2_155 MTFKRMAAVIASVPALVMGLWMGVGVGFAGPAQADP-VIQGVFNYNQEGL
TH_3818|M.thermoresistible__bu MRVITHAFAVLVVL-------FGGAVAVAGDAAADSQPLQGVYAYHEEGA
* . * * * :* : . *
MMAR_4979|M.marinum_M S-GVTWTITALCDQPSGTRNMNDYSDPVVWAFNCALNVVSATPNAPITRA
MAV_0665|M.avium_104 S-GVTWTISALCDQPSGTRNMNDYSDPIVFAFNCALNIVSSTP-EQISAA
Mb3521|M.bovis_AF2122/97 S-GVTWTITALCDQPSGTRNMNDYSDPIVWAFNCALNVVSTTP-QQITRT
Rv3491|M.tuberculosis_H37Rv S-GVTWTITALCDQPSGTRNMNDYSDPIVWAFNCALNVVSTTP-QQITRT
MAB_2453c|M.abscessus_ATCC_199 G-EVTWTISAVCVQASGTRVQSDYTDPTIQADGCTLTVTSATP-DIVKHS
Mflv_2762|M.gilvum_PYR-GCK --TGTWTIFPTCVPIVG-----DLREPLYLPVGCTLHVTPSGGVR-----
Mvan_3772|M.vanbaalenii_PYR-1 --TGTWTIYPTCVPVVG-----DLREPLYLPVGCRLHVNPSRGLT-----
MSMEG_4353|M.smegmatis_MC2_155 G-AATWTIYPSCVPVVG-----DLREPLYLPVACVLHVQGSPGVS-----
TH_3818|M.thermoresistible__bu PEGTTWTVTPTCSPTVG-----DLREPLYLPVGCTLHVTSATPAQVTF-E
***: . * * * :* . * * : :
MMAR_4979|M.marinum_M EKLQNFSGRARLSSVLWTFTVTKQDGVVCPGGGTAPSTDTYAFSDETMSG
MAV_0665|M.avium_104 DKLQNFSGRARMSSMLWTFKVQKDNGVSCPGGGTAPTTETYAFSDETMSG
Mb3521|M.bovis_AF2122/97 DRLQNFSGRARMSSMLWTFQVNQADGVACPDGSTAPSSETYAFSDETLTG
Rv3491|M.tuberculosis_H37Rv DRLQNFSGRARMSSMLWTFQVNQADGVACPDGSTAPSSETYAFSDETLTG
MAB_2453c|M.abscessus_ATCC_199 DRLQNFSTPARLVDDQWTFLHARPQGMTCPDGSYAPTQEKYVFNDETLAG
Mflv_2762|M.gilvum_PYR-GCK ------GGDARLTGGLWTYTTNNREGLQCPDGSWAPTTEDVSFNET--SG
Mvan_3772|M.vanbaalenii_PYR-1 ------GGDAALVGGVWGFSVPKTEGMQCPDGSWEPTVEVIRFDDVTMSG
MSMEG_4353|M.smegmatis_MC2_155 ------GGDAKMAGGMWQFSTNIKEGIKCSDGSWAPIVETYRFDDVALTG
TH_3818|M.thermoresistible__bu ERAANFGGDARLVAGRWQLVANKLEGTRCPDGGTRPSTDVYEFDNETLTG
. * : * :* *..*. * : *.: :*
MMAR_4979|M.marinum_M THTTLHDAVCGMQPDMKKEPFSLQMVGPPPSPIERYPLYCN--DIAMCY
MAV_0665|M.avium_104 THTTLHGAVCGLQPEMKKQPFSLQMTGPPPSPIERYPLYCN--GIAMCY
Mb3521|M.bovis_AF2122/97 THTTVHGAVCGLQPKLSKQPFSLQLIGPPPSPVQRYPLYCN--NIAMCY
Rv3491|M.tuberculosis_H37Rv THTTVHGAVCGLQPKLSKQPFSLQLIGPPPSPVQRYPLYCN--NIAMCY
MAB_2453c|M.abscessus_ATCC_199 THTTIHSAVCGGQPGMTKKPFSLQFVKPLDVPVERFPQYCD--GFAHCW
Mflv_2762|M.gilvum_PYR-GCK TRRITHAGACGLQPGIIDVPFTLSFKAPLPIPVDQYPLICEPGGLRRCF
Mvan_3772|M.vanbaalenii_PYR-1 TRKITHNGNCGTAPGIIEIPFTLSFKEPLPIPVDQYPLICEPGGLRRCF
MSMEG_4353|M.smegmatis_MC2_155 TREVSNTAVCGLAPAIHRFPFTLTFKEPLPIPVKTYPLDCEPWGLRLCT
TH_3818|M.thermoresistible__bu TRTVTQPGECGLLPSMEKRAFTLTFLRPLPRPVERYPFYCEPGGLRACW
*: : . ** * : .*:* : * *:. :* *: .: *