For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSGPWRARVDSGDWSAIAAELDEYGGALLPKLLTAAETERLRALYSDDVRFRSTIDMARYRYGRGQYRYL RTPYPEPLEALKHALYPRLLPIAREWWTRLGRTPPWPNALDEWLDMCHRAGQTKSTAILLRYGAGDWNAL HRDLYGDLVFPLQVVVNLNEPGRDYTGGEFLLLEQRPRAQSRGTATQLPHGHGFVFTTRDRPVRSTRGWS AAPVRHGVSAVRSGERTTLALVFHDAA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4317 | - | - | 100% (237) | hypothetical protein MSMEG_4317 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2252 | - | 1e-54 | 74.19% (124) | hypothetical protein Mb2252 |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv2227 | - | 2e-73 | 71.52% (165) | hypothetical protein Rv2227 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_2215 | - | 1e-106 | 74.68% (233) | hypothetical protein MAV_2215 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_4317|M.smegmatis_MC2_155 --MSGPWRAR-VDSGDWSAIAAELDEYGGALLP-KLLTAAETERLRALYS MAV_2215|M.avium_104 MDLMDRWHRR-VDSGDWDAIAAAVGEFGGALLP-RLVTPREAARLRELYA Mb2252|M.bovis_AF2122/97 -------------------------------------------------- Rv2227|M.tuberculosis_H37Rv --MGQTRRLRRLGRHRCRGQRVRWRTATSADHPRRGRPAAQAVRRRRPVS MSMEG_4317|M.smegmatis_MC2_155 DDVRFRSTIDMARYRYGRGQYRYLRTPYPEPLEALKHALYPRLLPIAREW MAV_2215|M.avium_104 DDGLFRSTIDMAPKRYGAGQYRYFRAPYPEPIEQLKQALYPRLLPIARDW Mb2252|M.bovis_AF2122/97 -------------------------------------------------- Rv2227|M.tuberculosis_H37Rv LDGRYG--IQAVRRR----AVSIFPCPLSRVIERLKQALYPKLLPIARNW MSMEG_4317|M.smegmatis_MC2_155 WTRLGRTPPWPNALDEWLDMCHRAGQTKSTAILLRYGAGDWNALHRDLYG MAV_2215|M.avium_104 WGKLGRDPVWPDRLDDWLAACHAAGQQRSTALMLKYGAGDWNALHQDLYG Mb2252|M.bovis_AF2122/97 -----------------MASCHAAGQTRSTALMLKYGTNDWNALHQDLYG Rv2227|M.tuberculosis_H37Rv WAKLGREAPWPDSLDDWLASCHAAGQTRSTALMLKYGTNDWNALHQDLYG : ** *** :***::*:**:.******:**** MSMEG_4317|M.smegmatis_MC2_155 DLVFPLQVVVNLNEPGRDYTGGEFLLLEQRPRAQSRGTATQLPHGHGFVF MAV_2215|M.avium_104 DLVFPLQVVINLSDPQTDYTGGEFLLVEQRPRAQSRGTATQLPQGHGYVF Mb2252|M.bovis_AF2122/97 ELVFPLQVVINLSDPETDYTGGEFLLVEQRPRAQSRGTAMQLPQGHGYVL Rv2227|M.tuberculosis_H37Rv ELVFPLQVVINLSDPETDYTGGEFLLVEQRPRAQSRGTAMQLPQGHGYVF :********:**.:* *********:************ ***:***:*: MSMEG_4317|M.smegmatis_MC2_155 TTRDRPVRSTRGWSAAPVRHGVSAVRSGERTTLALVFHDAA MAV_2215|M.avium_104 TTRERPVRSARGWSAAPVRHGVSVVRSGQRYAMGLIFHDAA Mb2252|M.bovis_AF2122/97 TTRDRPVRTSRGWSASPVRHGLSTIRSGERYAMGLIFHDAA Rv2227|M.tuberculosis_H37Rv TTRDRPVRTSRGWSASPVRHGLSTIRSGERYAMGLIFHDAA ***:****::*****:*****:*.:***:* ::.*:*****