For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_4267 (-)

annotation: cytochrome c oxidase polypeptide 4
coordinates: 4350770 - 4351189
length: 139

HIEARLFEILTAFFALAAVVYAVLTAMFATGGVEWAGTTALVLTTGLTLITGTFFRFVARRLDTRPEDYE
DAEISDGAGELGFFAPHSWWPILISLSFSTAAVGAALWLPWLIAAGVAFVITSVCGLVFEYYWGPEKH*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_4267--100% (139)cytochrome c oxidase polypeptide 4

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2222c-6e-6378.42% (139) integral membrane protein
M. gilvum PYR-GCKMflv_2950-2e-6886.33% (139) putative integral membrane protein
M. tuberculosis H37RvRv2199c-6e-6378.42% (139) integral membrane protein
M. leprae Br4923MLBr_00876-3e-6176.26% (139) hypothetical protein MLBr_00876
M. abscessus ATCC 19977MAB_1962-6e-6479.14% (139) cytochrome c oxidase polypeptide 4
M. marinum MMMAR_3243-8e-6175.54% (139) integral membrane protein
M. avium 104MAV_2292-5e-6278.42% (139) cytochrome c oxidase polypeptide 4
M. thermoresistible (build 8)TH_2396-7e-6279.86% (139) Possible conserved integral membrane protein
M. ulcerans Agy99MUL_3556-6e-6175.54% (139) integral membrane protein
M. vanbaalenii PYR-1Mvan_3563-3e-6782.01% (139) putative integral membrane protein

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_3243|M.marinum_M               MHIEARLFEFVAAFFVVTAVLYGVVTSIFATGGVEWAGTTALALTGGMAL
MUL_3556|M.ulcerans_Agy99           MHIEARLFEFVAAFFVVTAVLYGVVTSIFATGGVEWAGTTALALTGGMAL
Mb2222c|M.bovis_AF2122/97           MHIEARLFEFVAAFFVVTAVLYGVLTSMFATGGVEWAGTTALALTGGMAL
Rv2199c|M.tuberculosis_H37Rv        MHIEARLFEFVAAFFVVTAVLYGVLTSMFATGGVEWAGTTALALTGGMAL
MLBr_00876|M.leprae_Br4923          MHIEARLFEFVAVFFVIMAVLYGVLTSMFATGGVDWVGTTALALTGGLAL
MAV_2292|M.avium_104                MHIEARLFEFIAGFFFLTALLYGVLTALFATGGEEWAGTTALALTGGLAL
Mflv_2950|M.gilvum_PYR-GCK          MHIEARLFEFLTAFFALCAVVYAVLTAMFATGGVEWAGTTALFLTTGLTL
Mvan_3563|M.vanbaalenii_PYR-1       MHIEARLFEFLTAFFALSTVVYAVLTDLFARGGIEWAGTTALALTTGLTL
MSMEG_4267|M.smegmatis_MC2_155      MHIEARLFEILTAFFALAAVVYAVLTAMFATGGVEWAGTTALVLTTGLTL
MAB_1962|M.abscessus_ATCC_1997      MHIEARLFEILTGFFALATVVYAVLTAMYANGGVEWAGTTAMVMTTGLSL
TH_2396|M.thermoresistible__bu      MHIEARIFEILTAFFVLTAIVYAVLTGMFADGGVEWAGSTALVMTAGLTL
                                    ******:**::: ** : :::*.*:* ::* ** :*.*:**: :* *::*

MMAR_3243|M.marinum_M               IVATFFRFVARRLDTRPEDYEGAEISDGAGELGFFSPHSWWPIMVALSGS
MUL_3556|M.ulcerans_Agy99           IVATFFRFVARRLDTRPEDYEGAEISDGAGELGFFSPHSWWPIMVALSGS
Mb2222c|M.bovis_AF2122/97           IVATFFRFVARRLDSRPEDYEGAEISDGAGELGFFSPHSWWPIMVALSGS
Rv2199c|M.tuberculosis_H37Rv        IVATFFRFVARRLDSRPEDYEGAEISDGAGELGFFSPHSWWPIMVALSGS
MLBr_00876|M.leprae_Br4923          IVATFFRFVARRLDIRPEDYEGAEISDGAGELGFFSPHSWWPVLVALSGS
MAV_2292|M.avium_104                IVATFFRFVARRIDTRPEDYEGAEISDGAGELGFFSPHSWWPILIALSGS
Mflv_2950|M.gilvum_PYR-GCK          ITGTFFRFVARRLDTRPEDYEDAEIADGAGELGFFSPHSWWPIMIALSGS
Mvan_3563|M.vanbaalenii_PYR-1       ITGTFFRFVARRLDTRPEDYEDAEIADGAGELGFFSPHSWWPVMIALAGS
MSMEG_4267|M.smegmatis_MC2_155      ITGTFFRFVARRLDTRPEDYEDAEISDGAGELGFFAPHSWWPILISLSFS
MAB_1962|M.abscessus_ATCC_1997      IISTFFRFVARRLDTRPEDYEDAEIADGAGELGFYSPHSWWPIMIALAAA
TH_2396|M.thermoresistible__bu      IIGTFFRFVARRLDTRPEDYEDAEISDGAGELGFFSPHSWWPILIAAAFS
                                    * .*********:* ******.***:********::******:::: : :

MMAR_3243|M.marinum_M               VAATGIALWLPWLIVAGVVFILGSAAGLVFEYYVGPEKH
MUL_3556|M.ulcerans_Agy99           VAATGIALWLPWLIVAGVVFILGSAAGLVFEYYVGPEKH
Mb2222c|M.bovis_AF2122/97           VAAVGIALWLPWLIAAGVAFILASAAGLVFEYYVGPEKH
Rv2199c|M.tuberculosis_H37Rv        VAAVGIALWLPWLIAAGVAFILASAAGLVFEYYVGPEKH
MLBr_00876|M.leprae_Br4923          VAAVGIALWLPWLIVAGVVFVLASAAGLVFEYYVGPEKH
MAV_2292|M.avium_104                VAAVGIALWLPWLIVAGVMFILSSVAGLVFEYYLGPEKH
Mflv_2950|M.gilvum_PYR-GCK          ITAVGMAMWLPWLIVAGVCFILTTVSGLVFEYYTGPEKH
Mvan_3563|M.vanbaalenii_PYR-1       VTAVGMALWLPWLIVAGVCFILTTVAGLVFEYHWGPEKH
MSMEG_4267|M.smegmatis_MC2_155      TAAVGAALWLPWLIAAGVAFVITSVCGLVFEYYWGPEKH
MAB_1962|M.abscessus_ATCC_1997      TTAVGVALWLPWLLAAGAVFVLSAVAGLVFEYHIGAEKH
TH_2396|M.thermoresistible__bu      TVGVGLALGLWWLFTAAVAMVIAAVAGLVFEYHIGPEKH
                                     ...* *: * **:.*.. ::: :..******: *.***