For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
THFLVLLLALLIGVVAGLRAMTAPAAVAWAAALQWINLDNTWVEWLAHPITVTVLTILAVGELVTDKLPK TPSRKTAIQFGTRLVTGAFAGAVIGTAWGYKFGGLGAGMIGAVLGTLGGAEARRRLVAATGGRDLPIALS EDAVAVLGGFGIAALTAVV*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_4179 | - | - | 100% (160) | integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2144c | - | 2e-58 | 66.88% (160) | integral membrane protein |
| M. gilvum PYR-GCK | Mflv_3058 | - | 3e-50 | 61.88% (160) | 17 kDa surface antigen |
| M. tuberculosis H37Rv | Rv2120c | - | 2e-58 | 66.88% (160) | integral membrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3013 | - | 3e-33 | 53.33% (150) | hypothetical protein MAB_3013 |
| M. marinum M | MMAR_3102 | - | 6e-61 | 69.38% (160) | hypothetical protein MMAR_3102 |
| M. avium 104 | MAV_2394 | - | 1e-53 | 65.00% (160) | hypothetical protein MAV_2394 |
| M. thermoresistible (build 8) | TH_2594 | - | 2e-11 | 61.22% (49) | PUTATIVE - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_3469 | - | 3e-51 | 62.50% (160) | 17 kDa surface antigen |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3058|M.gilvum_PYR-GCK MTQVLVLVLALAIGVVAGLRAMTAPAVVAWGAMLGWIDVADKWSEWMAHP
Mvan_3469|M.vanbaalenii_PYR-1 MTQVLVLVLALLIGVVAGSRALTAPAVVAWGAMLGWIDVADKWSEWMAHP
MSMEG_4179|M.smegmatis_MC2_155 MTHFLVLLLALLIGVVAGLRAMTAPAAVAWAAALQWINLDNTWVEWLAHP
Mb2144c|M.bovis_AF2122/97 MTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNF
Rv2120c|M.tuberculosis_H37Rv MTHVLVLLLALLIGVVAGLRSLTAPAVVSWAAFLGWINLHGTWASWMGNF
MMAR_3102|M.marinum_M MTHFVVLLLALLIGVVAGLRSMTAPAVVSWAAFLSWINLHGTWASWVGNL
TH_2594|M.thermoresistible__bu --------------------------------------------------
MAV_2394|M.avium_104 MTHALIVLLALLIGVVAGLRSLTAPAVVAWAALIGWIDLHGTWASWMANI
MAB_3013|M.abscessus_ATCC_1997 MTG--LYVAALLIGIVAGLRAMTPLAVLSWAAFAKCLLLEGTWASFLASL
Mflv_3058|M.gilvum_PYR-GCK ITATVLTIFLVGELITDQLPKTPSRKVPPQFIARLISGGFAGAVIGSAFF
Mvan_3469|M.vanbaalenii_PYR-1 ITVTVLTIFALGELVTDQLPMTPSRKVPPQFIARLITGGFSGAVIGSAFF
MSMEG_4179|M.smegmatis_MC2_155 ITVTVLTILAVGELVTDKLPKTPSRKTAIQFGTRLVTGAFAGAVIGTAWG
Mb2144c|M.bovis_AF2122/97 VTVVIVSVLAVAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWG
Rv2120c|M.tuberculosis_H37Rv VTVVIVSVLAVAELVNDKRPKTPPRTVTPVFAVRIILGAFAGAVIGTAWG
MMAR_3102|M.marinum_M ITVVILSVLAVGELVNDKLPKTPPRTAPPVFAVRIILGAFAGAVIGTAWG
TH_2594|M.thermoresistible__bu --------------------------------------------------
MAV_2394|M.avium_104 ITVIVFTVLAVGELVNDKLPKTPARTAAPIFAARIVLGGLAGAALGAWPH
MAB_3013|M.abscessus_ATCC_1997 VVAIIATVLAAGEIVNDKLPKTPSRKAPPAFAARMVLGAFYGAVFGTLAH
Mflv_3058|M.gilvum_PYR-GCK HTFS----ATGAGMIGAVLGTMAGAALRAGLADRNHGKDRPGAFIEDVIA
Mvan_3469|M.vanbaalenii_PYR-1 HTFS----ATGAGVVGAVLGTLAGAELRSRFAGAKGGNDRPGAFTEDVLA
MSMEG_4179|M.smegmatis_MC2_155 YKFG----GLGAGMIGAVLGTLGGAEARRRLVAATGGRDLPIALSEDAVA
Mb2144c|M.bovis_AF2122/97 YRWG----GLGAGVIGAVLGTMGGYQARTRLVAARGGHDLPIALLEDSVA
Rv2120c|M.tuberculosis_H37Rv YRWG----GLGAGVIGAVLGTMGGYQARTRLVAARGGHDLPIALLEDSVA
MMAR_3102|M.marinum_M YRWG----GLGAGIIGAVLGTLGGYQARTKLVAARGGHDLPIALLEDSIA
TH_2594|M.thermoresistible__bu -------------LIGAVLGTIGGYQVRTRLTTASGGRDWPFAVLEDLVA
MAV_2394|M.avium_104 WTFT----ALGAGVIGAVLGTLGGYHARRRLVAATGGKDLPIALLEDVVA
MAB_3013|M.abscessus_ATCC_1997 DTSPGLLIGLVLGAIGAVIGTLGGAWARGALATAFG-KDLPAALIEDAIT
:***:**:.* * :. .* * *. ** ::
Mflv_3058|M.gilvum_PYR-GCK VGGGFLVAFLVSLVP---------
Mvan_3469|M.vanbaalenii_PYR-1 VGGGVLVAFLVSLV----------
MSMEG_4179|M.smegmatis_MC2_155 VLGGFGIAALTAVV----------
Mb2144c|M.bovis_AF2122/97 VLGGFAIVAAAAAL----------
Rv2120c|M.tuberculosis_H37Rv VLGGFAIVAAAAAL----------
MMAR_3102|M.marinum_M VLGGFAIVATVAAL----------
TH_2594|M.thermoresistible__bu VAGGVAVAALVAGL----------
MAV_2394|M.avium_104 IAGGFAILAATGHVLTDYLLTAVK
MAB_3013|M.abscessus_ATCC_1997 VAAALAITAGLAT-----------
: ... : .