For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MGPDELFQRAVIARRYYLEGRTRVQIAEEFGISRFKVARMLDEALGSGMVEIKIHNPGSIDVELSTALQR RYGLQHAYAVMTSPDSDPRGTDTVGADDRVASVAKAMAELLQSILRDGDVIGVDCGRTLAHIADHITELP HCDVVQLTGMAGAITHNGVDLVRRISEVSGGQTWPLYAPLVVSDARTAASLASSQQIQDTIAQHAKVTCA IVSVGAWVEGASQVYSSLTTTEVEALEAAGVCAESCALLLDAEGNRLPGLDDRRMGIDEATLREIPTVIA IATGPEKIAATRAVLRSGMVSSLVTDVEIAAAVLDDNADEEGAKRT
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3606 | - | - | 100% (326) | transcriptional regulator |
M. smegmatis MC2 155 | MSMEG_3092 | - | 4e-29 | 30.32% (310) | transcriptional regulator, sugar-binding family protein |
M. smegmatis MC2 155 | MSMEG_3264 | - | 2e-22 | 29.34% (317) | transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_2012 | - | 2e-16 | 28.75% (320) | repressor |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_3606|M.smegmatis_MC2_155 ------------------MGPDELFQRAVIARRYYLEGRTRVQIAEEFGI TH_2012|M.thermoresistible__bu VEVVMSGPTMDSPEPSAPAAAEDLRLALRAASLYYLDNLTQAEVAARLGV ..::* * ***:. *:.::* .:*: MSMEG_3606|M.smegmatis_MC2_155 SRFKVARMLDEALGSGMVEIKIHNP----GSIDVELSTALQRRYGLQHAY TH_2012|M.thermoresistible__bu SRPTAGRLIARAKAKGLVRIEVVVPPDQRDSVYADEEMDLEAAFGLIEAV ** ...*:: .* ..*:*.*:: * .*: .: . *: :** .* MSMEG_3606|M.smegmatis_MC2_155 AVMTSPDSDPRGTDTVGADDRVASVAKAMAELLQSILRDGDVIGVDCGRT TH_2012|M.thermoresistible__bu VVGGNLDDAG----PLDDPATWAPVGRAGARLLTRRLRPTDSLGFNWGPE .* . *. .:. *.*.:* *.** ** * :*.: * MSMEG_3606|M.smegmatis_MC2_155 LAHIADHITE--LPHCDVVQLTGMAGAITHN-GVDLVR-RISEVSGGQTW TH_2012|M.thermoresistible__bu VVAVAKALPAGAASCRAVVQLDGAISAGNYQTGTEYVLGRCAERLHAKVI :. :*. :. . **** * .* .:: *.: * * :* .:. MSMEG_3606|M.smegmatis_MC2_155 PLYAPLVVSDARTAASLASSQQIQDTIAQHAKVTCAIVSVGAWVEGASQV TH_2012|M.thermoresistible__bu RLPAPLYA-DPATVASLHNDSLISRALEAGRSAEVMMFGVGTVSTSTTLF * *** . *. *.*** ... *. :: .. :..**: .:: . MSMEG_3606|M.smegmatis_MC2_155 YSSLTTT-EVEALEAAGVCAESCALLLDAEGNRLP-GLDDRRMGIDEATL TH_2012|M.thermoresistible__bu EGSFLDTGMLDRLKAQGAVGEIGGRFFDADGVVLETELSPRAVSVPLEDI .*: * :: *:* *. .* . ::**:* * *. * :.: : MSMEG_3606|M.smegmatis_MC2_155 REIPTVIAIATGPEKIAATRAVLRSGMVSSLVTDVEIAAAVLDDNADEEG TH_2012|M.thermoresistible__bu RDCPTTILLTGGSGKYEAALAALRGGFARYLVCDVHCARWLLDNRKEVPR *: **.* :: *. * *: *.**.*:. ** **. * :**:. : MSMEG_3606|M.smegmatis_MC2_155 AKRT TH_2012|M.thermoresistible__bu ----