For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AAEDDPFDLRRFVDAQDGVYPTALDELRSGRKRTHWIWFVFPQLRGLGRSPTAHHYGISSRDEALAYLRH PVLGARLRECAKVVAQIEGRTAEEIFGRPDNLKVRSSVTLFAEVASLAGEDDAEFVAVLDRLYGGTPDPA TLGLLGRV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3577 | - | - | 100% (149) | calpastatin |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1904 | - | 1e-42 | 59.57% (141) | hypothetical protein Mb1904 |
M. gilvum PYR-GCK | Mflv_3334 | - | 1e-37 | 66.09% (115) | hypothetical protein Mflv_3334 |
M. tuberculosis H37Rv | Rv1873 | - | 5e-42 | 58.87% (141) | hypothetical protein Rv1873 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_2841 | - | 4e-45 | 60.99% (141) | hypothetical protein MAV_2841 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_3060 | - | 2e-46 | 66.20% (142) | hypothetical protein Mvan_3060 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3334|M.gilvum_PYR-GCK MTRVISSGSWQRRTASIPQCWPS-----CAPAKRSHWIWFIFPQVRGLGR Mvan_3060|M.vanbaalenii_PYR-1 MTDGDDPYDLERFVAAQDRVYAAVLTELRAGAKRTHWIWFVFPQLRGLGH Mb1904|M.bovis_AF2122/97 MKSASDPFDLKRFVYAQAPVYRSVVEELRAGRKRGHWMWFVFPQLRGLGS Rv1873|M.tuberculosis_H37Rv MKSASDPFDLKRFVYAQAPVYRSVVEELRAGRKRGHWMWFVFPQLRGLGS MAV_2841|M.avium_104 MDSAADPFDLERFVDAQEPVYADVVDELRAGRKRRHWMWFVFPQLRGLGG MSMEG_3577|M.smegmatis_MC2_155 MAAEDDPFDLRRFVDAQDGVYPTALDELRSGRKRTHWIWFVFPQLRGLGR * .. . .* . : : : ** **:**:***:**** Mflv_3334|M.gilvum_PYR-GCK SVTAQKYGITSLAEAKAYLAHPVLGPRLRECAELLAAHTGRSATQILGHP Mvan_3060|M.vanbaalenii_PYR-1 SATAYRYGIASVDEAKAYLAHPVLGPRLRECAELLMTHQGRSATEILGYP Mb1904|M.bovis_AF2122/97 SPLAVRYGISSLEEAQAYLQHDLLGPRLHECTGLVNQVQGRSIEEIFGPP Rv1873|M.tuberculosis_H37Rv SPLAVRYGISSLEEAQAYLQHDLLGPRLHECTGLVNQVQGRSIEEIFGPP MAV_2841|M.avium_104 SAMADRYGISSLPEARAYLRHELLGPRLRECARLVERVQGRSVGQIFGSP MSMEG_3577|M.smegmatis_MC2_155 SPTAHHYGISSRDEALAYLRHPVLGARLRECAKVVAQIEGRTAEEIFGRP * * :***:* ** *** * :**.**:**: :: **: :*:* * Mflv_3334|M.gilvum_PYR-GCK DDLKVRSSMTLFAQAAAG--ADDAVFRTVLDVFYDGQDDPATLQLLG-- Mvan_3060|M.vanbaalenii_PYR-1 DDLKVRSSMTLFARACD----DDAVFRAVLDAFYDG-EDPATVDLLD-- Mb1904|M.bovis_AF2122/97 DNLKLCSSMTLFARAT----DANQDFVALLAKYYGGGEDRRTVALLAVT Rv1873|M.tuberculosis_H37Rv DDLKLCSSMTLFARAT----DANQDFVALLAKYYGGGEDRRTVALLAVT MAV_2841|M.avium_104 DDLKLCSSMTLFAHAT----DDNADFLAVLQKYYDGRQDPVTLARLADS MSMEG_3577|M.smegmatis_MC2_155 DNLKVRSSVTLFAEVASLAGEDDAEFVAVLDRLYGGTPDPATLGLLGRV *:**: **:****.. : * ::* *.* * *: *