For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MALPAVSDDWLVALATGGFGHQSSLVTMGLTNSEQEDMMTTATTPLVPPFASATAIAKVRAAENLWNTRE PERVARGYSTDSVWRNRSAFIHGRPAIVEFLKAKWATELDYRLIKEVWAYGDDRIAVRFAYEYHDAAGQW FRAYGNENWEFDPDGLMRHRHASINDLAIAESDRLFHWDSSGPRPDRHPGLSELGL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3298 | - | - | 100% (196) | response regulator receiver domain-containing protein |
M. smegmatis MC2 155 | MSMEG_6243 | - | 8e-57 | 63.92% (158) | response regulator receiver domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3054c | - | 2e-44 | 59.03% (144) | hypothetical protein MAB_3054c |
M. marinum M | MMAR_0376 | - | 1e-45 | 56.67% (150) | hypothetical protein MMAR_0376 |
M. avium 104 | MAV_5143 | - | 1e-41 | 54.00% (150) | response regulator receiver domain-containing protein |
M. thermoresistible (build 8) | TH_0849 | - | 6e-45 | 56.67% (150) | response regulator receiver domain protein |
M. ulcerans Agy99 | MUL_4736 | - | 4e-45 | 56.00% (150) | hypothetical protein MUL_4736 |
M. vanbaalenii PYR-1 | Mvan_4732 | - | 4e-45 | 59.59% (146) | hypothetical protein Mvan_4732 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0376|M.marinum_M ------------------------------------MNPMTESRPPFPPF MUL_4736|M.ulcerans_Agy99 ------------------------------------MNPMTESRPPFPPF MAV_5143|M.avium_104 ---------------------------------------MTESRPPFPPF TH_0849|M.thermoresistible__bu ---------------------------------------MTDTRPPFPPF Mvan_4732|M.vanbaalenii_PYR-1 ---------------------------------------MSESRPPFPPF MAB_3054c|M.abscessus_ATCC_199 ---------------------------------------MT--RPPLPPF MSMEG_3298|M.smegmatis_MC2_155 MALPAVSDDWLVALATGGFGHQSSLVTMGLTNSEQEDMMTTATTPLVPPF : * .*** MMAR_0376|M.marinum_M TFETATQKVQAAEDAWNTRDPQRVSLAYTVDSRWRNRDEYVVGREQIVAF MUL_4736|M.ulcerans_Agy99 TFETATQKVQAAEDAWNTRDPQRVSLAYTVDSRWRNRDEYVVGREQIVAF MAV_5143|M.avium_104 TRDTALQKVQAAEDAWNTRDPEHVSLAYTPDSRWRNRDEYIVGRDQIVAF TH_0849|M.thermoresistible__bu TLETAIQKVQAAEDAWNSRDPHLVSLAYTPDSEWRNREQHIVGRTQIVDF Mvan_4732|M.vanbaalenii_PYR-1 DLTTALQKVQAAEDAWNTCDPHRVSLAYTPDSEWRNRDRFITGRAQIVAF MAB_3054c|M.abscessus_ATCC_199 DIETAHQKVRAAENAWNTRDPEGVAAAYTEDSVWRNRDEFITGRAEIVAF MSMEG_3298|M.smegmatis_MC2_155 ASATAIAKVRAAENLWNTREPERVARGYSTDSVWRNRSAFIHGRPAIVEF ** **:***: **: :*. *: .*: ** ****. .: ** ** * MMAR_0376|M.marinum_M LTRKWQRELDYSLRKSLWSFGEDRIAVRFQYESRDATGQWYRSYGNELWE MUL_4736|M.ulcerans_Agy99 LTRKWQRELDYSLRKSLWSFGEDRIAVRFQYESRDATGQWYRSYGNELWE MAV_5143|M.avium_104 LTRKWQRELDYSLRKSLWDFHDNRIAVRFQYECRDRSGQWYRSYGNELWE TH_0849|M.thermoresistible__bu LTAKWQRELDYVLRKSLWGFRENRIAVRFQYESHDASGQWYRSYGNELWE Mvan_4732|M.vanbaalenii_PYR-1 LTAKWQRELDYALRKSLWDFRDNRIAVRFQYECRDATGQWWRSYGNELWE MAB_3054c|M.abscessus_ATCC_199 LTRKWAKENGYALRKELWGFRENRMAVRFQYEWHDEAGQWWRSYGNELWE MSMEG_3298|M.smegmatis_MC2_155 LKAKWATELDYRLIKEVWAYGDDRIAVRFAYEYHDAAGQWFRAYGNENWE *. ** * .* * *.:* : ::*:**** ** :* :***:*:**** ** MMAR_0376|M.marinum_M FTPSGLMARREASINDVAITESQRRFF----GPRPAAEHG-QEIPMW MUL_4736|M.ulcerans_Agy99 FTPSGLMARREASINDVAITEPQRRFF----GPRPAAEHG-QEIPMW MAV_5143|M.avium_104 FAESGLMARREASINDVPIDESQRRYF----GPRPASEHG-REIPLW TH_0849|M.thermoresistible__bu FTPEGLMSRREASINDVPITESERRFF----GPRPKSEHG-QDIPLW Mvan_4732|M.vanbaalenii_PYR-1 FDDGGLMRRREASINDVAIDESDRRYF----GPRPDDERG-HDFALH MAB_3054c|M.abscessus_ATCC_199 FTSEGLMSRREASINDTPIAETQRRIF----GPRPEGDE--SPLPIR MSMEG_3298|M.smegmatis_MC2_155 FDPDGLMRHRHASINDLAIAESDRLFHWDSSGPRPDRHPGLSELGL- * *** :*.***** .* *.:* . **** . : :