For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GRSPSLARRFFDRLEPVHAVTYFSGESRSALEGLGFRGFWQGYFAARSAPLGRVAPEVVAAVFYNFTPER VAKTLPAVWDLAAPSTVLAVRSEAAVAALRRAGVTDSPATRTAADLAAAAARNAPLDARPLFAANRALDW PDEPVAMLWHAVTLLREQRGDAHVAVLAAEGISGRECNVLHAAAGRVPAEMIKRSRDYDDEQWNLHVDAL RRRGWLDGAGELTEAGRAIKKHVEDRTDTLALTALEALTDTEVETLFATLTPITRLVVAAGDIPVDTPMG LRRDDLDDDSAHLT*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_3253 | - | - | 100% (295) | hypothetical protein MSMEG_3253 |
| M. smegmatis MC2 155 | MSMEG_6750 | - | 9e-08 | 28.41% (176) | hypothetical protein MSMEG_6750 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3128 | - | 1e-111 | 67.12% (295) | hypothetical protein Mflv_3128 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2220c | - | 8e-97 | 58.98% (295) | hypothetical protein MAB_2220c |
| M. marinum M | MMAR_2573 | - | 9e-96 | 59.36% (283) | hypothetical protein MMAR_2573 |
| M. avium 104 | MAV_0134 | - | 1e-112 | 68.49% (292) | hypothetical protein MAV_0134 |
| M. thermoresistible (build 8) | TH_0739 | - | 1e-114 | 70.21% (292) | conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_3188 | - | 6e-94 | 58.30% (283) | hypothetical protein MUL_3188 |
| M. vanbaalenii PYR-1 | Mvan_3405 | - | 1e-110 | 68.62% (290) | hypothetical protein Mvan_3405 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3128|M.gilvum_PYR-GCK -MVPRNAMTARRLHDRIEPVHAVTYFAPEARSALDALGYRGFWAGYFAAR
Mvan_3405|M.vanbaalenii_PYR-1 --MPRNHTIARRLHDRIEPVHAVTYFAPEARAALDDLGYRGFWMGYVAAR
MSMEG_3253|M.smegmatis_MC2_155 --MGRSPSLARRFFDRLEPVHAVTYFSGESRSALEGLGFRGFWQGYFAAR
TH_0739|M.thermoresistible__bu VTRTRTAILARRFYDRFEPVHAVTYFAPEARRALDDLGYRGFWMGYFASR
MAV_0134|M.avium_104 --MRRQPLLARRFFDRYEPVHAVTYFAPEARAALDALGYRGFWMGYFAAR
MMAR_2573|M.marinum_M --MQRTPELARRLYDRFEPIHAVTYFAPEARAALANLGYRGFWMGYFAAR
MUL_3188|M.ulcerans_Agy99 --MQRTPELARRLYDRFEPIHAVTYFAPEARAALANLGYRGFWMGYFAAR
MAB_2220c|M.abscessus_ATCC_199 --MARSAVLARRLYERFEPVHGIVYFAPEARAAVEDLGYRGFWRGYFATR
* ***:.:* **:*.:.**: *:* *: **:**** **.*:*
Mflv_3128|M.gilvum_PYR-GCK SAPLGPVPAEVVTAAFYNFAPERVAKAVPGVWDVAPPSEALAARRESAVA
Mvan_3405|M.vanbaalenii_PYR-1 SAPLGAVPAEVVTAAFYNFAPERVAKALPAAWDVAPPAAALRARQESAVA
MSMEG_3253|M.smegmatis_MC2_155 SAPLGRVAPEVVAAVFYNFTPERVAKTLPAVWDLAAPSTVLAVRSEAAVA
TH_0739|M.thermoresistible__bu SAPLGRVPTEVVTAVFYNFAPTRVARALPDAWQIAGPEQALRARQESAVA
MAV_0134|M.avium_104 SAPLGAVPREVVAAIFYNFAPERVAKALPAAWEIAGPQAALRARQESAVA
MMAR_2573|M.marinum_M SAPLGQVAPEVVTAAFYNFAPARVAKALPAAWDIAEPRLALQARQDSAVA
MUL_3188|M.ulcerans_Agy99 SAPLGQVAPEVVTAAFYNFAPARVAKALPAAWDIAEPRLALQARQDSAVA
MAB_2220c|M.abscessus_ATCC_199 SAPLGRADARVVQAIFYNFASFRVRKSLDGAWDSISPAQALAVRQAGAVA
***** . .** * ****:. ** ::: .*: * .* .* .***
Mflv_3128|M.gilvum_PYR-GCK ALQRSGVEDGEAA-VVADLVAKAVDEVTPDGRVLYGANRSLPWPTEPLAR
Mvan_3405|M.vanbaalenii_PYR-1 ALRRCGVTDDEAG-AVADLGAKALAGADVGGRPLFAANRALDWPDEPLAR
MSMEG_3253|M.smegmatis_MC2_155 ALRRAGVTDSPATRTAADLAAAAARNAPLDARPLFAANRALDWPDEPVAM
TH_0739|M.thermoresistible__bu ALHRYGVRDSESVRTAAELAARAAGSAGLDGRPLFAANAALDWPDDPVAR
MAV_0134|M.avium_104 ALRRYGLRPDENVAVAAELAAKAARGAPLDGRPLFAANLALPWPEDPLAA
MMAR_2573|M.marinum_M ALRRYGLTDDDNVRSAARLAGSAARQASLEGRALFAANRALPWPEDPVAA
MUL_3188|M.ulcerans_Agy99 ALRRYGLTDDDNVRSAGRLAGSAASRASLEGRALFGANRALPWPEDPVAA
MAB_2220c|M.abscessus_ATCC_199 ALRRYGLTDDENLRTAAELLGRAAHEASSSGRPLYAALTTVPWPDEPVAA
**:* *: . .. * . * . .* *:.* :: ** :*:*
Mflv_3128|M.gilvum_PYR-GCK LWHASTLLREHRGDGHVAVLTAEGVSGRECNLLHAAAGRVPKEMIMRARD
Mvan_3405|M.vanbaalenii_PYR-1 LWHTTTLLREHRGDGHVAVLVAEGVSGRECNVLHAAAGGVSEEMIKRSRD
MSMEG_3253|M.smegmatis_MC2_155 LWHAVTLLREQRGDAHVAVLAAEGISGRECNVLHAAAGRVPAEMIKRSRD
TH_0739|M.thermoresistible__bu LWHAVTLLREHRGDAHVAVLTAAGISGRESNVLHAAADRVPAELIMRSRD
MAV_0134|M.avium_104 LWHATTLLREQRGDAHVAVLAAAGISGRESNVLHAAAGNVSRDYIARTRD
MMAR_2573|M.marinum_M LWHATTLLREHRGDSHVAVLVAAGVSGRESNVFHCAADGVPNDYMKLTRH
MUL_3188|M.ulcerans_Agy99 LWHATTLLREHRGDGHVAVLVAAGVSGREPNVFHCAADGVPNDYMKLTRH
MAB_2220c|M.abscessus_ATCC_199 LWHAATLLREQRGDGHVAALVAAGIGGRESNVFHVASGRATKDTIMRSRD
***: *****:***.***.*.* *:.*** *::* *:. .. : : :*.
Mflv_3128|M.gilvum_PYR-GCK YDDEQWARHMGALQQRGILDADGELTDEGRNLKQHIEDRTDTIALGALDA
Mvan_3405|M.vanbaalenii_PYR-1 YDDAQWAHHQSALRRRGLLDDRGELTVSGRELKQRIEERTDAVALPALDA
MSMEG_3253|M.smegmatis_MC2_155 YDDEQWNLHVDALRRRGWLDGAGELTEAGRAIKKHVEDRTDTLALTALEA
TH_0739|M.thermoresistible__bu YDDEEWARIQDRLAGRGLLDADGALTDAGRALKQHIEDTTDRLALAVLDP
MAV_0134|M.avium_104 YDEASWRRHEQRLAERGLLDGDGALTAAGRQCKDHIEATTDALALSALDA
MMAR_2573|M.marinum_M YDDAEWQACVNSLVGRGLLTEEGSLAPAGRELHEHLENTTDALALRAFDG
MUL_3188|M.ulcerans_Agy99 YDDAEWQACVNSLVGRGLLTEEGSLAPAGRELHEHLENTTDALALRAFDG
MAB_2220c|M.abscessus_ATCC_199 YDEEEWGEVEAELTRRGLLEG-GGLSPYGAAVKADIEDRTDRAFLPVLDV
**: .* * ** * * *: * : :* ** * .::
Mflv_3128|M.gilvum_PYR-GCK LDDGEVESLFQALTPIARKVVAAGDVPAGTPMGLSRDDLDDGSAHLS--
Mvan_3405|M.vanbaalenii_PYR-1 LADDEVEALFAALTPITRKVVAAGDIPAVTPMGLNRDYLDDEGVQPA--
MSMEG_3253|M.smegmatis_MC2_155 LTDTEVETLFATLTPITRLVVAAGDIPVDTPMGLRRDDLDDDSAHLT--
TH_0739|M.thermoresistible__bu LTDDEVETLFRTLTPIARAVVAAGDIPAATPMGLNRAELDDDSARLA--
MAV_0134|M.avium_104 LTDDEVETLFEALTPITRAVIAGGDIPAATPMTLRRDELHDDSAHLVAR
MMAR_2573|M.marinum_M LDDAELDALFQALTQVAKTVISAGDLPSVTPMSIRRDF-----------
MUL_3188|M.ulcerans_Agy99 LDDAELDALFQALTQVAKTVISAGDLPSVTPMSIRRDF-----------
MAB_2220c|M.abscessus_ATCC_199 LTDAELETLFRSLTPVTRQVIAAGDLPASTPMGLRRNDLDDDSAHLT--
* * *:::** :** ::: *::.**:* *** : *