For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VVALAIAGCNQSTPEEEAAQTDLKIVEKVQIDENGAEVTGAGDVTPADPAGDGNAVCPPVMIAMMGALNG PDAALGINIKNGVQMAIDKHNAANAQCQVQLKAFDTEGDPQKATGVAPQIVDEPFIIGVVGPAFSGETKA TGDVFNQAGLVATTASATNVQLSENGWRTFFRGLANDGVQGPSVANYMKNTLENKKVCVVDDSTDYGLGL AEAVRTTLGPVADASCNISVKKGDKDFSAAVTQIKGAAPDSVFYSGYYSEAAPFVQQLKDGGVEATFISA DGTKDPEFVKQAGESSKGALLSCPCGPATAEFAEEYTQKFGQEPGTYSTEGYDLGTILLKGIDSGAITRA DLLNYVRNYEGQGVARKYQWTDNGELTTTLIWMYDVQ
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_3247 | - | - | 100% (387) | branched-chain amino acid ABC transporter substrate-binding protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3574 | - | 0.0 | 82.95% (387) | extracellular ligand-binding receptor |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2626c | - | 1e-155 | 67.01% (385) | ABC transporter ligand-binding protein |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_1080 | - | 1e-173 | 74.16% (387) | branched-chain amino acid ABC transporter substrate-binding |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2841 | - | 0.0 | 83.72% (387) | extracellular ligand-binding receptor |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3574|M.gilvum_PYR-GCK MRGRVARKAFALGGAGLIALAVAGCNQGSPEEDAAQTNLKIVEKVQIDEG
Mvan_2841|M.vanbaalenii_PYR-1 MRGRVARKAFALGTAGLTVLAIAGCSQSTPEEEAAQTNLKIVEKVQIDEN
MSMEG_3247|M.smegmatis_MC2_155 ----------------MVALAIAGCNQSTPEEEAAQTDLKIVEKVQIDEN
TH_1080|M.thermoresistible__bu ----VARNVVALGGAGVIALALAGCTQPAAEDDGAQGDLKIVERVAIDEN
MAB_2626c|M.abscessus_ATCC_199 -----MRARASVFMLGAVALALAGCHAGAQTDSSHQSNLKIVPLVQIAQD
.**:*** : :.. * :**** * * :.
Mflv_3574|M.gilvum_PYR-GCK GAEVAASTGAAPADPAGDGNATCPPVSIAMAGALNGPDAALGINIKNGVQ
Mvan_2841|M.vanbaalenii_PYR-1 GAEVAASTGAAPADPAGDGKATCPPVSIAMAGALNGPDAALGINIKNGVQ
MSMEG_3247|M.smegmatis_MC2_155 GAEVTGAGDVTPADPAGDGNAVCPPVMIAMMGALNGPDAALGINIKNGVQ
TH_1080|M.thermoresistible__bu GAEVQPPDVTAAADPAGDGSATCPPVSIAMAGALTGPDSALGINIRNGVQ
MAB_2626c|M.abscessus_ATCC_199 GSEVPASNTQSAADPAGDGKAQCANVSLATAGALNGPDSALGTNIRNGVQ
*:** . :.*******.* *. * :* ***.***:*** **:****
Mflv_3574|M.gilvum_PYR-GCK LAIDKHNEANPGCQVQLKPFDTEGDPQKASAIAPQIVDDQYTIGLVGPAF
Mvan_2841|M.vanbaalenii_PYR-1 LAIDKHNAANPGCQVQLKPFDTEGDPQKATAIAPQIVDDQYTIGLVGPAF
MSMEG_3247|M.smegmatis_MC2_155 MAIDKHNAANAQCQVQLKAFDTEGDPQKATGVAPQIVDEPFIIGVVGPAF
TH_1080|M.thermoresistible__bu LAVDKHNEANPGCQVELKTFDTEGDPQKASAIAPQIVDDQSIVGLVGPAF
MAB_2626c|M.abscessus_ATCC_199 LAIDKHNAANPGCQIKLREFDTEGLPQNASNIAPQIIGDPTIVGLIGPAF
:*:**** **. **::*: ***** **:*: :****:.: :*::****
Mflv_3574|M.gilvum_PYR-GCK SGETKATGGVFDQAGLVATTASATNVTLSENGWKTFFRGLANDGVQGPSV
Mvan_2841|M.vanbaalenii_PYR-1 SGETKATGGVFDQAGLVATTASATNVTLSENGWKTFFRGLANDGVQGPSV
MSMEG_3247|M.smegmatis_MC2_155 SGETKATGDVFNQAGLVATTASATNVQLSENGWRTFFRGLANDGVQGPSV
TH_1080|M.thermoresistible__bu SGETKSTGGVFSQAGLVATTASATNVTLSENGWRTFFRGLGNDGSQGQAV
MAB_2626c|M.abscessus_ATCC_199 SGETKSTGQIFSEAGLVSTTGSATNVTLTQQGWKTFFRGLANDGVQGPAV
*****:** :*.:****:**.***** *:::**:******.*** ** :*
Mflv_3574|M.gilvum_PYR-GCK ANYLKNTLGHQKVCVVDDSTDYGLGLGQAVRETLGPVADSACNISVKKGD
Mvan_2841|M.vanbaalenii_PYR-1 ANYLKNTLGHKKVCVVDDSTDYGLGLGQAVRETLGPVADSACNISVKKGD
MSMEG_3247|M.smegmatis_MC2_155 ANYMKNTLENKKVCVVDDSTDYGLGLAEAVRTTLGPVADASCNISVKKGD
TH_1080|M.thermoresistible__bu ANYLRNTSGDRKVCVVDDSTDYGVGLAQVVRETLGPVADGACNISIKKGD
MAB_2626c|M.abscessus_ATCC_199 ANYLKKTLGYQKICVVDDSTDYGSGLANAVRGTLG----NDCNVSVKKGD
***:::* :*:********** **.:.** *** **:*:****
Mflv_3574|M.gilvum_PYR-GCK KDFSAAVTQIKGAAPDSVFFSGYYAEAAPFVQQLRDGGFEGTFASADGTK
Mvan_2841|M.vanbaalenii_PYR-1 KDFSAAVTQINGAAPDSVFFSGYYAEAAPFVQQLRDGGFEGTFASADGTK
MSMEG_3247|M.smegmatis_MC2_155 KDFSAAVTQIKGAAPDSVFYSGYYSEAAPFVQQLKDGGVEATFISADGTK
TH_1080|M.thermoresistible__bu KDFAAAINQIRTAAPDSVFFSGYYPEAAPFVQQLRDGGVEATFVSADGSK
MAB_2626c|M.abscessus_ATCC_199 KDFSAAVAQLKNAAPDAVYFGGYYAEAAPLVQQLRNGGVTATFVSSDGTK
***:**: *:. ****:*::.***.****:****::**. .** *:**:*
Mflv_3574|M.gilvum_PYR-GCK DPEFVKQAGESSKGAVLACPCGPATGAFAEEYTAKFNQEPGTYSAEGYDL
Mvan_2841|M.vanbaalenii_PYR-1 DPEFVKQAGESSKGAVLACPCGPATGSFAEEYTAKFNQEPGTYSAEGYDL
MSMEG_3247|M.smegmatis_MC2_155 DPEFVKQAGESSKGALLSCPCGPATAEFAEEYTQKFGQEPGTYSTEGYDL
TH_1080|M.thermoresistible__bu DPEFIKQAGDAAAGTLLSCPCSPAPAEFAEEYRQKFNRDPGTYSTEGYDL
MAB_2626c|M.abscessus_ATCC_199 DVEFVKQAGDSAKDALLSCPCGPASNSFAKDYTAKFNQEPGTYSTEGYDL
* **:****::: .::*:***.**. **::* **.::*****:*****
Mflv_3574|M.gilvum_PYR-GCK GTILLKGIDSGAITRPALLDFVRNYQGQGVAREYQWTPEGELTTTLIWIY
Mvan_2841|M.vanbaalenii_PYR-1 GTILVKGIDSGAITRPALLDFVRNYKGQGVAREYQWTPEGELTTTLIWIY
MSMEG_3247|M.smegmatis_MC2_155 GTILLKGIDSGAITRADLLNYVRNYEGQGVARKYQWTDNGELTTTLIWMY
TH_1080|M.thermoresistible__bu GTILLTGIDSGAVTRPALLEYVRGYSGTGVARTYQWSPTGELTDTLIWIY
MAB_2626c|M.abscessus_ATCC_199 ATILVKGIDAGKSTRAGLLDWVRNYQGQGVAREYKWNENGELTSTLIWVY
.***:.***:* **. **::**.*.* **** *:*. **** ****:*
Mflv_3574|M.gilvum_PYR-GCK DVQ
Mvan_2841|M.vanbaalenii_PYR-1 DVQ
MSMEG_3247|M.smegmatis_MC2_155 DVQ
TH_1080|M.thermoresistible__bu EVQ
MAB_2626c|M.abscessus_ATCC_199 KVT
.*