For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MHCPFCRHPDSRVVDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVSEPFSREKVIRGVRRA CQGRDVDDDALNVLAQKVEDAVRGLGTPEIPSHEVGLAILGPLRELDEVAYLRFASVYRSFSSAEDFERE IEALRAHRGA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_2743 | nrdR | - | 100% (150) | transcriptional regulator NrdR |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2737c | nrdR | 2e-76 | 91.22% (148) | transcriptional regulator NrdR |
M. gilvum PYR-GCK | Mflv_3954 | nrdR | 8e-77 | 92.57% (148) | transcriptional regulator NrdR |
M. tuberculosis H37Rv | Rv2718c | nrdR | 3e-76 | 91.22% (148) | transcriptional regulator NrdR |
M. leprae Br4923 | MLBr_01005 | nrdR | 7e-76 | 90.54% (148) | transcriptional regulator NrdR |
M. abscessus ATCC 19977 | MAB_3036c | nrdR | 4e-76 | 90.00% (150) | transcriptional regulator NrdR |
M. marinum M | MMAR_1994 | - | 7e-78 | 93.92% (148) | membrane-associated regulatory protein |
M. avium 104 | MAV_3612 | nrdR | 5e-76 | 89.26% (149) | transcriptional regulator NrdR |
M. thermoresistible (build 8) | TH_0182 | - | 5e-67 | 89.13% (138) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_3361 | nrdR | 5e-78 | 93.92% (148) | transcriptional regulator NrdR |
M. vanbaalenii PYR-1 | Mvan_2443 | nrdR | 5e-77 | 92.57% (148) | transcriptional regulator NrdR |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_2743|M.smegmatis_MC2_155 -------------------------------------------------- MAB_3036c|M.abscessus_ATCC_199 -------------------------------------------------- Mb2737c|M.bovis_AF2122/97 -------------------------------------------------- Rv2718c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_1994|M.marinum_M MNSENRSTSTLLGYRGVERRWIATALAVRGSAQVLSERSEVPHCQDAEGA MUL_3361|M.ulcerans_Agy99 -------------------------------------------------- MLBr_01005|M.leprae_Br4923 -------------------------------------------------- MAV_3612|M.avium_104 -------------------------------------------------- Mflv_3954|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_2443|M.vanbaalenii_PYR-1 -------------------------------------------------- TH_0182|M.thermoresistible__bu -------------------------------------------------- MSMEG_2743|M.smegmatis_MC2_155 -MHCPFCRHPDSRVVDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVV MAB_3036c|M.abscessus_ATCC_199 -MHCPFCRHPDSRVVDSREADEGQAIRRRRSCPECGRRFTTVETAVLAVV Mb2737c|M.bovis_AF2122/97 -MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVV Rv2718c|M.tuberculosis_H37Rv -MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVV MMAR_1994|M.marinum_M AMHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVV MUL_3361|M.ulcerans_Agy99 -MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVV MLBr_01005|M.leprae_Br4923 -MHCPFCRHSDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVVAVV MAV_3612|M.avium_104 -MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVV Mflv_3954|M.gilvum_PYR-GCK -MHCPFCRHPDSRVVDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVV Mvan_2443|M.vanbaalenii_PYR-1 -MHCPFCRHPDSRVVDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVV TH_0182|M.thermoresistible__bu -------------VVDSRETDEGQAIRRRRACPECGRRFTTVETAVLAVV *:****:**********:***************:*** MSMEG_2743|M.smegmatis_MC2_155 KRSGVSEPFSREKVIRGVRRACQGRDVDDDALNVLAQKVEDAVRGLGTPE MAB_3036c|M.abscessus_ATCC_199 KRSGVTEPFSRDKVVKGVRRACQGRDVDDDALNLLAQQVEDAVRAAGSPE Mb2737c|M.bovis_AF2122/97 KRSGVTEPFSREKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPE Rv2718c|M.tuberculosis_H37Rv KRSGVTEPFSREKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPE MMAR_1994|M.marinum_M KRSGVSEPFSREKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPE MUL_3361|M.ulcerans_Agy99 KRSGVSEPFSREKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPE MLBr_01005|M.leprae_Br4923 KRSGVTEPFSRGKVIRGVRRACQGRQVDDDALNLLAQQVEDTVRAAGLPE MAV_3612|M.avium_104 KRSGVTEPFSREKVISGVRRACQGRQVDDDALNLLAQQVEDTVRAAGSPE Mflv_3954|M.gilvum_PYR-GCK KRSGVTEPFSREKVIRGVRRACQGRQVDDDALNKLAQQVEDAVRATGSPE Mvan_2443|M.vanbaalenii_PYR-1 KRSGVTEPFSREKVIRGVRRSCQGRQVDDDALNLLAQQVEDAVRATGSAE TH_0182|M.thermoresistible__bu KRSGVTEPFSREKVIRGVRAACQGRQVDDDALNLLAQQVEDTVRATGSPE *****:***** **: *** :****:******* ***:***:**. * .* MSMEG_2743|M.smegmatis_MC2_155 IPSHEVGLAILGPLRELDEVAYLRFASVYRSFSSAEDFEREIEALRAHRG MAB_3036c|M.abscessus_ATCC_199 IPSNEVGLAILGPLRDLDEVAYLRFASVYRGFSSAEDFEREIAALRAHRD Mb2737c|M.bovis_AF2122/97 IPSHDVGLAILGPLRELDEVAYLRFASVYRSFSSADDFAREIEALRAHRN Rv2718c|M.tuberculosis_H37Rv IPSHDVGLAILGPLRELDEVAYLRFASVYRSFSSADDFAREIEALRAHRN MMAR_1994|M.marinum_M IPSHEVGLAILGPLRELDEVAYLRFASVYRSFSSAEDFEREIEALRAHRQ MUL_3361|M.ulcerans_Agy99 IPSHEVGLAILGPLRELDEVAYLRFASVYRSFSSAEDFEREIEALRAHRQ MLBr_01005|M.leprae_Br4923 VPSHEVGLAILGPLRELDEVAYLRFASVYRSFSSADDFEREIEALRAHRR MAV_3612|M.avium_104 VPSHEVGLAILGPLRDLDEVAYLRFASVYRSFESADDFEREIQALREHRG Mflv_3954|M.gilvum_PYR-GCK VPANEVGLAILGPLRDLDEVAYLRFASVYRSFSSAEDFEREIEALRAHRE Mvan_2443|M.vanbaalenii_PYR-1 VPSHEVGLAILGPLRELDEVAYLRFASVYRSFSSAEDFEREIQALRAHRE TH_0182|M.thermoresistible__bu VPSHEVGLAILGPLRELDEVAYLRFASVYRSFTSAEDFEREIRELRAHRA :*:::**********:**************.* **:** *** ** ** MSMEG_2743|M.smegmatis_MC2_155 A------- MAB_3036c|M.abscessus_ATCC_199 APAES--- Mb2737c|M.bovis_AF2122/97 LSAHS--- Rv2718c|M.tuberculosis_H37Rv LSAHS--- MMAR_1994|M.marinum_M VPTSS--- MUL_3361|M.ulcerans_Agy99 VPTSS--- MLBr_01005|M.leprae_Br4923 VSTSR--- MAV_3612|M.avium_104 VATPG--- Mflv_3954|M.gilvum_PYR-GCK VSARS--- Mvan_2443|M.vanbaalenii_PYR-1 VPAQS--- TH_0182|M.thermoresistible__bu ASAEQKSN