For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LAVLFAALLHAIWNSLAHAVSDRVVGFALIGVVDAIGGAALIALGGLPPAAAWPYIIASATVHVFYNLLL LASYQLGEFSQMYPLARGTSPWLVAVVALVVLGHEMPLTELAGVLTISAGLIALVFVGGRPTRKDLPALG AATLTGVMIAGYTVIDGVGVQQGPLLAYTGWMFLLQGPPLAIFAAIRRGPRLLGAVRECAVPGLAGGAIS LAAYTIVLAAQRTGALAPIAALRETSIVFGALIGALFLGEKLGARRAIASAVVLAGVLLISLP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_2639 | - | - | 100% (274) | integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0677c | - | 1e-05 | 28.57% (140) | hypothetical protein MAB_0677c |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_2639|M.smegmatis_MC2_155 -----MLAVLFAALLHAIWNSLAHAVSDRVVGFALIGVVDAIGGAALIAL MAB_0677c|M.abscessus_ATCC_199 MTTRHRLLGLTVAVLWGVNFVAIHAGLEHFPPLFFAGLRFAVLALPVILF * * .*:* .: ** ::. : : *: *: . .:* : MSMEG_2639|M.smegmatis_MC2_155 GGLPPAAAWPYIIASATVHVFYNLLLLASYQLGEFSQMYPLARGTSPWLV MAB_0677c|M.abscessus_ATCC_199 VPWPRVPVRWLLLYGLGFGTIQFAFLFLAMANGMPTGLASLVLQASAPFT * ... :: . . .: :*: : * : : .*. :*. :. MSMEG_2639|M.smegmatis_MC2_155 AVVALVVLGHEMPLTELAGVLTISAGLIALVFVGGRPTRKDLPALGAATL MAB_0677c|M.abscessus_ATCC_199 AILGVVLLGERMSAVQVTGISLAVAGMALIAADRATHGASAAVVPVVVTL *::.:*:**..*. .:::*: **: :. . . . ..** MSMEG_2639|M.smegmatis_MC2_155 TGVMIAGYTVIDG-----VGVQQGPLLAYTGWMFLLQGPPLAIFAAIRRG MAB_0677c|M.abscessus_ATCC_199 LGALGWAFGNIASRKAMEHNTDPHTPLRLTLWMSVVPPIPLFALSAFLEG *.: .: * . ..: . * * ** :: ** ::*: .* MSMEG_2639|M.smegmatis_MC2_155 P-----RLLGAVRECAVPGLAGGAISLAAYTIVLAAQRTGALAPIAALRE MAB_0677c|M.abscessus_ATCC_199 PDAGWKALTSIGTHSGLIALAGLVYIVVLATIVGLGLWTYLMGRYPASRV * * . ...: .*** . :. *** . * :. .* * MSMEG_2639|M.smegmatis_MC2_155 T-----SIVFGALIGALFLGEKLGARRAIASAVVLAGVLLISLP------ MAB_0677c|M.abscessus_ATCC_199 APFSLLVPIVGITTSWLALGERPTALELVGAAVVITGCLIGMTARPAARA : :.* . * ***: * . :.:***::* *: . MSMEG_2639|M.smegmatis_MC2_155 ----------------------- MAB_0677c|M.abscessus_ATCC_199 PQHTDTPERGPRELSACAAPAGH