For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_2519 (rpsB)

annotation: 30S ribosomal protein S2
coordinates: 2604918 - 2605793
length: 291

MPSDNRQPEEVWLAMAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEF
VKETVAHGGTVLFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGF
EGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAVWVVDTNKEHIAVGEARKLGIPVIAILDTNCDPDVV
DYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGQGSGEKPAEGAEPLAEWEQELLAGATAGAADASAEG
AAAPESSTDAS
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_2519rpsB-100% (291)30S ribosomal protein S2

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2914crpsB1e-13786.41% (287) 30S ribosomal protein S2
M. gilvum PYR-GCKMflv_4133rpsB1e-13887.81% (279) 30S ribosomal protein S2
M. tuberculosis H37RvRv2890crpsB1e-13786.41% (287) 30S ribosomal protein S2
M. leprae Br4923MLBr_01598rpsB1e-13188.30% (265) 30S ribosomal protein S2
M. abscessus ATCC 19977MAB_3196crpsB1e-13887.64% (275) 30s ribosomal protein S2
M. marinum MMMAR_1819rpsB1e-13891.27% (275) 30S ribosomal protein S2 RpsB
M. avium 104MAV_3744rpsB1e-13989.96% (279) 30S ribosomal protein S2
M. thermoresistible (build 8)TH_0150rpsB1e-13991.85% (270) PROBABLE 30S RIBOSOMAL PROTEIN S2 RPSB
M. ulcerans Agy99MUL_2067rpsB1e-13590.74% (270) 30S ribosomal protein S2
M. vanbaalenii PYR-1Mvan_2209rpsB1e-14290.84% (273) 30S ribosomal protein S2

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_2519|M.smegmatis_MC2_155      MPSDNRQPEEVWLAMAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRN
TH_0150|M.thermoresistible__bu      -------------------MKQLLDAGAHFGHQTRRWNPKMKRFIFTDRN
MMAR_1819|M.marinum_M               --------------MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRN
MUL_2067|M.ulcerans_Agy99           -------------------MKQLLDSGTHFGHQTRRWNPKMKRFIFTDRN
Mb2914c|M.bovis_AF2122/97           --------------MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRN
Rv2890c|M.tuberculosis_H37Rv        --------------MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRN
MAV_3744|M.avium_104                --------------MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRN
MLBr_01598|M.leprae_Br4923          --------------MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRN
Mflv_4133|M.gilvum_PYR-GCK          --------------MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRN
Mvan_2209|M.vanbaalenii_PYR-1       --------------MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRN
MAB_3196c|M.abscessus_ATCC_199      --------------MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRN
                                                       ******:*:**********************

MSMEG_2519|M.smegmatis_MC2_155      GIYIIDLQQTLTYIDKAYEFVKETVAHGGTVLFVGTKKQAQESIAEEATR
TH_0150|M.thermoresistible__bu      GIYIIDLQQTLSYIDKAYEFVKETVAHGGTILFVGTKKQAQEAIAEEATR
MMAR_1819|M.marinum_M               GIYIIDLQQTLTFIDKAYEFVKETVAHGGTVLFVGTKKQAQESVAAEATR
MUL_2067|M.ulcerans_Agy99           GIYIIDLQQTLTFIDKAYEFVKETVAHGGTVLFVGTKKQAQESVAAEATR
Mb2914c|M.bovis_AF2122/97           GIYIIDLQQTLTFIDKAYEFVKETVAHGGSVLFVGTKKQAQESVAAEATR
Rv2890c|M.tuberculosis_H37Rv        GIYIIDLQQTLTFIDKAYEFVKETVAHGGSVLFVGTKKQAQESVAAEATR
MAV_3744|M.avium_104                GIYIIDLQQTLTFIDKAYEFVKETVAHGGTVLFVGTKKQAQESIAAEATR
MLBr_01598|M.leprae_Br4923          GIYIIDLQQTLTFIDKAYEFVKETVARGGLVLFVGTKKQAQESVAAEATR
Mflv_4133|M.gilvum_PYR-GCK          GIYIIDLQQTLTYIDSAYEFVKETVAHGGSIMFVGTKKQAQESIAQEATR
Mvan_2209|M.vanbaalenii_PYR-1       GIYIIDLQQTLTYIDKAYEFVKETVAHGGSIMFVGTKKQAQESIAEEATR
MAB_3196c|M.abscessus_ATCC_199      GIYIIDLQQTLTYIDKAYEFVKETVAHGGSVMFVGTKKQAQEPIAEEATR
                                    ***********::**.**********:** ::**********.:* ****

MSMEG_2519|M.smegmatis_MC2_155      VGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGFEGRTKKEILM
TH_0150|M.thermoresistible__bu      VGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGFEGRTKKEILM
MMAR_1819|M.marinum_M               VGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGFEGRTKKEILG
MUL_2067|M.ulcerans_Agy99           VGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGFEGRSKKEILG
Mb2914c|M.bovis_AF2122/97           VGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGFEGRTKKEILG
Rv2890c|M.tuberculosis_H37Rv        VGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGFEGRTKKEILG
MAV_3744|M.avium_104                VGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGFEGRTKKEILG
MLBr_01598|M.leprae_Br4923          VGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGFEGRTKKEILG
Mflv_4133|M.gilvum_PYR-GCK          VGMPYVNQRWLGGMLTNFQTVHKRLQRMKELEAMEQTGGFEGRTKKEILM
Mvan_2209|M.vanbaalenii_PYR-1       VGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGFEGRTKKEILM
MAB_3196c|M.abscessus_ATCC_199      VGMPYVNQRWLGGMLTNFSTVHKRLQRLKELESMEQTGGFEGRTKKEILM
                                    ******************.********:****:**********:***** 

MSMEG_2519|M.smegmatis_MC2_155      LTREKNKLERSLGGIRDMQKVPSAVWVVDTNKEHIAVGEARKLGIPVIAI
TH_0150|M.thermoresistible__bu      LTREKNKLERSLGGIRDMQKVPSAIWVVDTNKEHIAVGEARKLGIPVIAI
MMAR_1819|M.marinum_M               LTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIPVIAI
MUL_2067|M.ulcerans_Agy99           LTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIPVIAI
Mb2914c|M.bovis_AF2122/97           LTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIPVIAI
Rv2890c|M.tuberculosis_H37Rv        LTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIPVIAI
MAV_3744|M.avium_104                LTREKNKLERSLGGIRDMSKVPSAIWVVDTNKEHIAVGEARKLGIPVIAI
MLBr_01598|M.leprae_Br4923          LTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGVPVIAI
Mflv_4133|M.gilvum_PYR-GCK          LTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHLAVAEARKLNIPIIAI
Mvan_2209|M.vanbaalenii_PYR-1       LTREKNKLERSLGGIRDMQKVPSAIWVVDTNKEHLAVAEARKLNIPIIAI
MAB_3196c|M.abscessus_ATCC_199      LTREKNKLERSLGGIRDMQKVPSAIFVVDTNKEHLAVAEARKLNIPIIAI
                                    ****************** *****::********:**.*****.:*:***

MSMEG_2519|M.smegmatis_MC2_155      LDTNCDPDVVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGQG-SGE
TH_0150|M.thermoresistible__bu      LDTNCDPDLVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGAGREGD
MMAR_1819|M.marinum_M               LDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGAGRGDG
MUL_2067|M.ulcerans_Agy99           LDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGAGRGDG
Mb2914c|M.bovis_AF2122/97           LDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADG
Rv2890c|M.tuberculosis_H37Rv        LDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADG
MAV_3744|M.avium_104                LDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGVGRGDG
MLBr_01598|M.leprae_Br4923          LDTNCDPDEVDYPIPGNDDAIRSAELLTTVIASAVAEGLQVRAGLRCGDG
Mflv_4133|M.gilvum_PYR-GCK          LDTNCDPDVVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGAGADKA
Mvan_2209|M.vanbaalenii_PYR-1       LDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGLQARAGAGADKA
MAB_3196c|M.abscessus_ATCC_199      LDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAIAEGLQARSGLAGGDE
                                    ******** *************** *** *:***:*****.*:*      

MSMEG_2519|M.smegmatis_MC2_155      KP---AEGAEPLAEWEQELLAGATAGAADAS--------AEGAAAPESST
TH_0150|M.thermoresistible__bu      KP---AETAEPLPEWEQELLAGATATAAGN---------PEGEKPAESTT
MMAR_1819|M.marinum_M               KPV--VEAAEPLAEWEQELLAGATAAAPAEG-----------AVATETTP
MUL_2067|M.ulcerans_Agy99           KPV--VEAAEPLAEWEQELLAGATAAAPAEG-----------AVATETTP
Mb2914c|M.bovis_AF2122/97           KPE--AEAAEPLAEWEQELLASATASATPSATASTTALTDAPAGATEPTT
Rv2890c|M.tuberculosis_H37Rv        KPE--AEAAEPLAEWEQELLASATASATPSATASTTALTDAPAGATEPTT
MAV_3744|M.avium_104                KPE--VEAAEPLAEWEQELLASATATAAP-----------TEAGAPEPTT
MLBr_01598|M.leprae_Br4923          KPE--TEAVEPLPEWEQELLAGAGSSALNDS----------GADLSEANP
Mflv_4133|M.gilvum_PYR-GCK          EAGQDGAAAEPLAEWEQELLAGATTAAPEAA--------AGEAAAAPEQS
Mvan_2209|M.vanbaalenii_PYR-1       AA----EAAEPLAEWEQELLAGATTAAPEAA--------AGEAAAP-EQS
MAB_3196c|M.abscessus_ATCC_199      KP----EAGEPLAEWEQELLASAVATTDEAS--------APSAAATETTT
                                     .       ***.********.* : :                  .   .

MSMEG_2519|M.smegmatis_MC2_155      DAS-
TH_0150|M.thermoresistible__bu      PQNS
MMAR_1819|M.marinum_M               TEG-
MUL_2067|M.ulcerans_Agy99           TEG-
Mb2914c|M.bovis_AF2122/97           DAS-
Rv2890c|M.tuberculosis_H37Rv        DAS-
MAV_3744|M.avium_104                DPS-
MLBr_01598|M.leprae_Br4923          TEA-
Mflv_4133|M.gilvum_PYR-GCK          S---
Mvan_2209|M.vanbaalenii_PYR-1       ----
MAB_3196c|M.abscessus_ATCC_199      EEG-