For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MADPATEQRTFPAPGSAVPGAPPPLRRPLTPADGVPVGPRPETAAVPADPPSHGVPAASGTTGARFTAAA ALFGIAVGLELAGLLSTRARSSRRRHVEPRSHRLV
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_2457 | - | - | 100% (105) | hypothetical protein MSMEG_2457 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv2090 | - | 7e-05 | 39.22% (51) | 5'-3' exonuclease |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_0290 | - | 7e-06 | 45.31% (64) | hypothetical protein MAV_0290 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_4145 | - | 9e-06 | 40.91% (66) | virulence factor Mce family protein |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_2457|M.smegmatis_MC2_155 --------------------------------------------------
Rv2090|M.tuberculosis_H37Rv --------------------------------------------------
Mvan_4145|M.vanbaalenii_PYR-1 -MLTRFVRNQLIIFTIASIVGVAVMLFAYMQVPTLLGVGRLVVTLELPES
MAV_0290|M.avium_104 MAQFGGLASPIPDPTPQPHGAASTTDIPVRGTPDAADTKPEPATESKPDA
MSMEG_2457|M.smegmatis_MC2_155 ------------------------------MADPATEQRT----------
Rv2090|M.tuberculosis_H37Rv ----------------------------MPAPDPMRGDPP----------
Mvan_4145|M.vanbaalenii_PYR-1 GGLYRFSNVTYRGVQVGKVTGVSLTENGAEATLSLETSPK----------
MAV_0290|M.avium_104 EEKRRPNRDGKTPADPKPVPDAGEKPDTDEKPKPDVDKAEPKAKVKDIGQ
. . .
MSMEG_2457|M.smegmatis_MC2_155 ----------------------------FPAP-----------GSAVPGA
Rv2090|M.tuberculosis_H37Rv ----------------------------HPAPPRLRSPLDPTSGDPLHPA
Mvan_4145|M.vanbaalenii_PYR-1 ----------------------------IPADLQAEVLSVSAVGEQYVDL
MAV_0290|M.avium_104 VTANDKVSTIGKSFGKAYLEAAKSPIKGIPAIVKAEYKAGTALGEKLAGK
** *.
MSMEG_2457|M.smegmatis_MC2_155 PP-------------PLRRPLTPADGVPVGPRPETAAVPADPPS------
Rv2090|M.tuberculosis_H37Rv PP-------------RLRSPLDPTSGDPLHPAPPRLRSPLDPTSGDPLHP
Mvan_4145|M.vanbaalenii_PYR-1 RP-------------NTDEGPYLEDGARIPVANTTVPQQVGPMLDQLSAL
MAV_0290|M.avium_104 IAGEGLLKSASRVSLKTAGRLVPGVGTAIGVISAYKNFEQGDYVGAAINM
. * : .
MSMEG_2457|M.smegmatis_MC2_155 --------------------------------------------------
Rv2090|M.tuberculosis_H37Rv APPRLRSPL-------------------------------VLLDGASMWF
Mvan_4145|M.vanbaalenii_PYR-1 VGSLPKDRIPD------------LLDETFKAFNGAGPDFGSMLDSAATLT
MAV_0290|M.avium_104 VSAIPGPIGWVGIAASTAWEAFDLGGNKIGQWDSPDGSTTHILPAAAHDI
MSMEG_2457|M.smegmatis_MC2_155 ---HGVPAASG-------------------------------TTGAR---
Rv2090|M.tuberculosis_H37Rv RSFFGVPSSIT-------------------------------APDGRPVN
Mvan_4145|M.vanbaalenii_PYR-1 NDVNGVSDQMRSLIDDSGPL---------------------IDSQAETAD
MAV_0290|M.avium_104 GGVTALDSQLREAQQCVFSFQDGPRGKVWDSNPPEALRLDGADIQKEIAE
.: .
MSMEG_2457|M.smegmatis_MC2_155 --------------------------------------------------
Rv2090|M.tuberculosis_H37Rv AVRGFIDSMAVVITQQRPNRLAVCLDLDWRPQFRVDLIPSYKAHRVAEPE
Mvan_4145|M.vanbaalenii_PYR-1 AIRTWAQSLNGISAQVVQNDPQVRALLQQGPAFAQEVSALLNQVKPTLPI
MAV_0290|M.avium_104 ALGGISDLFAEVDRVMSSAGEAYFDEYKARLQPHLEAMAALKEQVKPFTQ
MSMEG_2457|M.smegmatis_MC2_155 ----------------------------FTAAAALFGIAVG----LELAG
Rv2090|M.tuberculosis_H37Rv PNGQPDVE--------EVPDELTPQVDMIMELLDAFGIAMAGAPGFEADD
Mvan_4145|M.vanbaalenii_PYR-1 LLANLSTVGQTLLTYNPAIEQLLVLFPGIIAAQQSFGLPQNSPTGLPMGD
MAV_0290|M.avium_104 QLGNASDGAATAYTAVLDANRAAREQLVADGKLSDQGPASTFTSAVSAAG
* . . .
MSMEG_2457|M.smegmatis_MC2_155 LLSTRARSS-----------------------------------------
Rv2090|M.tuberculosis_H37Rv VLGTLATRE-----------------------------------------
Mvan_4145|M.vanbaalenii_PYR-1 FALTISDPNPCTVGFLPSTQWRSPEDE---TTIDTPDGLYCKLPQDSPMN
MAV_0290|M.avium_104 SQVTAADQNIANLFGEPAAVLTATVASGTGTRIDPSKKGAPVQTTASPAA
* : .
MSMEG_2457|M.smegmatis_MC2_155 ----RRR---------------HVEPRSHRLV------------------
Rv2090|M.tuberculosis_H37Rv ----RRDPVIVVSGDRDLLQVVADDPVPVRVLYLGRGLAKATLFGPAEVA
Mvan_4145|M.vanbaalenii_PYR-1 VRGARNYPCIEHPGKRAPTVELCNDPRGFVPTAIRNHITGPYPFDPNLVS
MAV_0290|M.avium_104 QTPVTPTSQTPTVTPKTETPAKTTDALGDLLRSLNQKQQMPTTPSTPNLG
:.
MSMEG_2457|M.smegmatis_MC2_155 --------------------------------------------------
Rv2090|M.tuberculosis_H37Rv ERYGLPAHRAG----------AAYAELALL------RGDPSDGLPGVP--
Mvan_4145|M.vanbaalenii_PYR-1 QGVPIDSTVEGPDRIYLPPEGTPLPPGAVR------AGTPPVSEPGTPPF
MAV_0290|M.avium_104 NGLGSGSPLGTGGSPLSTSPSKPLDTSSDRKLDDGRKGEEKKEERKLAEP
MSMEG_2457|M.smegmatis_MC2_155 --------------------------------------------------
Rv2090|M.tuberculosis_H37Rv GVGEKTAATLLARHGSLDQIMAAADDRKTTMAKGLRTKLLAASAYIKAAD
Mvan_4145|M.vanbaalenii_PYR-1 PVGAPAPMVPGAPPPAQPPILPPAPLLPGQGPLLPGQAVPVAPASGAVPV
MAV_0290|M.avium_104 KKEKSETKPSLAASKTDNAKAPESKLATAEKPGAHTAAVPAQPSAAAAAA
MSMEG_2457|M.smegmatis_MC2_155 --------------------------------------------------
Rv2090|M.tuberculosis_H37Rv RVVRVATDAPVTLSTPTDRFPLVAADPERTAELATRFGVESSIARLQKAL
Mvan_4145|M.vanbaalenii_PYR-1 APSAFGSNDSGVPTVGTAQYNPQTGEYIAPDGSMNRVTNVASGANPKSWK
MAV_0290|M.avium_104 NPAAPAAQGQSAPPEQSKQVDVKGTRVEFPDAKTAKLASLLANADPAHPL
MSMEG_2457|M.smegmatis_MC2_155 --------------------------------------------------
Rv2090|M.tuberculosis_H37Rv DTLPG---------------------------------------------
Mvan_4145|M.vanbaalenii_PYR-1 DLLPM---------------------------------------------
MAV_0290|M.avium_104 SLAEAAKMAGLTPPVPGQDPGSQVAPAQAKPGDLLVAGDKKYMLLEPGKF
MSMEG_2457|M.smegmatis_MC2_155 --------------------------------------------------
Rv2090|M.tuberculosis_H37Rv --------------------------------------------------
Mvan_4145|M.vanbaalenii_PYR-1 --------------------------------------------------
MAV_0290|M.avium_104 YDLQEYKVVSADQLPQDAGSRGGYFHLNDPSPTGAPGTQPVSGQTPGGVD
MSMEG_2457|M.smegmatis_MC2_155 --------------------------------------------------
Rv2090|M.tuberculosis_H37Rv --------------------------------------------------
Mvan_4145|M.vanbaalenii_PYR-1 --------------------------------------------------
MAV_0290|M.avium_104 QAVPGGTPPPAAPADATPQKPHDPAAGAPAPSGGVPSAGTPGAPKPTATG
MSMEG_2457|M.smegmatis_MC2_155 -------------------------------
Rv2090|M.tuberculosis_H37Rv -------------------------------
Mvan_4145|M.vanbaalenii_PYR-1 -------------------------------
MAV_0290|M.avium_104 GGPSSAEATQTGVGQPSPSPSTSALDPTAVR