For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSGRDYEDELQSERDYVAGLYARLDAERAQSQRRYAAALREHGGTAVERDAEVRALAKDIARLNVADNGL CFGRLDTLDDARLYIGRLGIFDRDNDFEPLLLDWRAPMARPFYVATAANPENMRRRRQFHTLGRKVVDFT DEILGRPTGAEHDATNDAALLAAVNAPRGEGMRDIVATIQAEQDQVIRLDHTGVLVIEGGPGTGKTVVAL HRVAYLLYTYRKQMERHGVLVVGPTPAFLDHIGRVLPSLGESDAVFMTPGDFVPGLHVTAEDTPEAAEVK GSLKILDVLKAAVADRQELPSEPIPIDLSDVTMRIDAETAKWARDEARKTGLPHNEARAEFVDVVTYVVT ERAVARIGRGWLTRDDKHAWEKMRADVVGELEDHEQFNAALDALWPILTPEDVLAQLYTSHERLRAAGAP ECLWRADGEAWTVSDVPLLDELVDLLGRNKAADEAAERERREEEAYAAGVLDLMVDREDLMDDEDHLLAQ DLIDAEELADRFKEQDNRELSERAAADREWTYGHVVVDEAQELSEMDWRLLMRRCPRRSFTIVGDLAQRR SPAGARSWGAMLDSYVPGRWVYKSLSVNYRTPAEIMAVAAAVLAEFAPDATPPDSVRACGVAPWARQVTD DDIASAIAEFVSEEAGREGTSVVIGPPDVPGTVPPSETKGLEFDAVLVVEPERILADGPRGAAELYVALT RATQRLGVLYRDALPQALAGLAEGDAAATVEQRTSA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_2174 | - | - | 100% (736) | superfamily protein I DNA or RNA helicase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3796 | - | 0.0 | 71.66% (727) | putative helicase |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3189c | - | 0.0 | 71.23% (737) | hypothetical protein MAB_3189c |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_1237 | - | 0.0 | 74.71% (613) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2598 | - | 0.0 | 74.07% (725) | putative helicase |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3796|M.gilvum_PYR-GCK MSTHHPSHYEAELQSEQAYVNDLYSRLDTERARVKARYSAALRGDVDTQN
Mvan_2598|M.vanbaalenii_PYR-1 MSTHHSTHYQAELQSERGYVDGLYARLDAERTRVKDRYAAALRSPVDAQN
MAB_3189c|M.abscessus_ATCC_199 MGKFRLTTHEEELQAEREYIAGLYERLDAERARVKGRYRSALRGPVDQQN
MSMEG_2174|M.smegmatis_MC2_155 ---MSGRDYEDELQSERDYVAGLYARLDAERAQSQRRYAAALR-----EH
TH_1237|M.thermoresistible__bu --------VPAELRSAHPDIPGVPWWGAALIALTATALGFAFDAGSGSKE
**:: : : .: : : *: :.
Mflv_3796|M.gilvum_PYR-GCK GATLLARDAEVRATAAQMDRLNVADAGLCFGRLDGVDGEHLYIGRIGVLD
Mvan_2598|M.vanbaalenii_PYR-1 GATLVARDAEVRATAAQMDRLNVADAGLCFGRLDSLTGERLYIGRIGVLD
MAB_3189c|M.abscessus_ATCC_199 GGAMAERDDEVRALARQAQRLDVADDGLCFGRLDAITGERSYVGRIGLLD
MSMEG_2174|M.smegmatis_MC2_155 GGTAVERDAEVRALAKDIARLNVADNGLCFGRLDTLDDARLYIGRLGIFD
TH_1237|M.thermoresistible__bu LSVVFSGTYMLGCLVAVLAVRPGRPPIVLFAAVPSAYFLFHGGQIRGLKD
.. : . . : *. : *: *
Mflv_3796|M.gilvum_PYR-GCK DTHDHEPLLLDWRAPAARAFYTATGANPEGMRRRRQFHSLGRRLLDFTDE
Mvan_2598|M.vanbaalenii_PYR-1 D--DHEPLLLDWRAPAARAFYVATGANPENMRRRRQFHSLGRRLLRFTDE
MAB_3189c|M.abscessus_ATCC_199 ESNDYEPLLIDWRAPAAQAFYIATSAHPENTRRRRQFRTRGRHVDDFTDE
MSMEG_2174|M.smegmatis_MC2_155 RDNDFEPLLLDWRAPMARPFYVATAANPENMRRRRQFHTLGRKVVDFTDE
TH_1237|M.thermoresistible__bu LAINCGYPLIERFPVXXXPFYTATAANPEGMRRRRQFHSRGRQLTGFTDE
: *:: . .** **.*:**. ******:: **:: ****
Mflv_3796|M.gilvum_PYR-GCK VFGRPRDGDAGDQPGDSSDAALLAAVDAPRGEGMRDIVATIQAEQDAIIR
Mvan_2598|M.vanbaalenii_PYR-1 VFGRPVADDAGEQPGSSSDVALLAAVNAPRGDGMRDIVATIQAEQDAIIR
MAB_3189c|M.abscessus_ATCC_199 ILGRPDGEDHDGERGTLSDAALLAAVNAPRGHGMRDIVATIQAEQDRIIR
MSMEG_2174|M.smegmatis_MC2_155 ILGRPTGAEHD----ATNDAALLAAVNAPRGEGMRDIVATIQAEQDQVIR
TH_1237|M.thermoresistible__bu ILGRP---DAGEDLTGDPDAALLAAINAPRGPGMRDIVATIQAEQDAVIR
::*** : . *.*****::**** ************** :**
Mflv_3796|M.gilvum_PYR-GCK LDHPGVLVIEGGPGTGKTVVALHRVAYLLYTQRKRMESHGVLVVGPNSAF
Mvan_2598|M.vanbaalenii_PYR-1 LDHPGVLVIEGGPGTGKTVVALHRVAYLLYTQRKRMESHGVLVVGPNAAF
MAB_3189c|M.abscessus_ATCC_199 LDHPGVLVIEGGPGTGKTVVALHRVAYLLYTQRKRMERHGVLVVGPNAAF
MSMEG_2174|M.smegmatis_MC2_155 LDHTGVLVIEGGPGTGKTVVALHRVAYLLYTYRKQMERHGVLVVGPTPAF
TH_1237|M.thermoresistible__bu LDHPGVLVIEGGPGTGKTAVALHRVAYLLYTRRSQLSGSGVLVVGPNPTF
***.**************.************ *.::. *******..:*
Mflv_3796|M.gilvum_PYR-GCK LRHIGRVLPSLGETNVVFTTTGDLFPGLRATAEDDPAAATAKGSLAMLDV
Mvan_2598|M.vanbaalenii_PYR-1 LRHIGRVLPSLGETNVVFMTTGDLVPGLHVTAEDTPAAAAIKGSLAMLDV
MAB_3189c|M.abscessus_ATCC_199 LGHISRVLPSLGETNVVFTTAGDLVPGLKVTAEDDEEAARVKGSLQILDV
MSMEG_2174|M.smegmatis_MC2_155 LDHIGRVLPSLGESDAVFMTPGDFVPGLHVTAEDTPEAAEVKGSLKILDV
TH_1237|M.thermoresistible__bu LDHIGRVLPNLGESDVVFMTPGDLVPGLRVTAQDSDDAARVKGSLEILDV
* **.****.***::.** *.**:.***:.**:* ** **** :***
Mflv_3796|M.gilvum_PYR-GCK LAAAVADRQRVPEEPLPIDLSDVSISIGPDIAQWAVQEARATEQPHNDAR
Mvan_2598|M.vanbaalenii_PYR-1 LKAAVADRQRAPQDPLPIDLSDVSVSIGADIAQWAIQEARAGDQPHNDAR
MAB_3189c|M.abscessus_ATCC_199 LAAAVADRQRAPENPMPIQLADVSVRIDADIAQWAIEEARASKLPHNEAR
MSMEG_2174|M.smegmatis_MC2_155 LKAAVADRQELPSEPIPIDLSDVTMRIDAETAKWARDEARKTGLPHNEAR
TH_1237|M.thermoresistible__bu LRAAVADRQRLPEEPLPIELSDVTVRIDAETAQWARQEARDSGLPHNEAR
* *******. *.:*:**:*:**:: *..: *:** :*** ***:**
Mflv_3796|M.gilvum_PYR-GCK ATFVDVLTWALSERAIAKIGRGWLTRDDRAAWEHLRADLLDELEDHAAFK
Mvan_2598|M.vanbaalenii_PYR-1 AVFVDVITWALTERAIAKIGRGWLTRDDRAAWEHLRADLLDELEDHTAFK
MAB_3189c|M.abscessus_ATCC_199 TVFTDVLTWALTERAIPRIGKGWLTREDRKAWEHLRAELLDELGDHEGFA
MSMEG_2174|M.smegmatis_MC2_155 AEFVDVVTYVVTERAVARIGRGWLTRDDKHAWEKMRADVVGELEDHEQFN
TH_1237|M.thermoresistible__bu AVFADVVTWVLTERAIARIGRGWLTRDDRAAWEELRADLLDELANNADYA
: *.**:*:.::***:.:**:*****:*: ***.:**:::.** :: :
Mflv_3796|M.gilvum_PYR-GCK AALDLLWPVLTPETVLAELYSSHERLRAAGADPVLYREDGAAWTLSDIPL
Mvan_2598|M.vanbaalenii_PYR-1 AAIDQLWPKLTPEVLLAELYSSPERLRAAGADPALYRTDGAAWTISDVPL
MAB_3189c|M.abscessus_ATCC_199 AALDALWPMLTPETLLSELYTSPERLRAAGADPALARRIGDAWTVSDVPL
MSMEG_2174|M.smegmatis_MC2_155 AALDALWPILTPEDVLAQLYTSHERLRAAGAPECLWRADGEAWTVSDVPL
TH_1237|M.thermoresistible__bu AALDQLWPILTPQQLLADLYTSPERLRAVGADPALYRADGEAWTVSDVPL
**:* *** ***: :*::**:* *****.** * * * ***:**:**
Mflv_3796|M.gilvum_PYR-GCK LDELVDLLGRDKSGEEAAEWERQEEAAYAAGVLDLMIGREDLMDDEDQLM
Mvan_2598|M.vanbaalenii_PYR-1 LDELVDLLGRDKSAEEAAERERREEAAYAAGVLDLMVDREDLMEDEDLLL
MAB_3189c|M.abscessus_ATCC_199 LDELVDLLGRDKAAEEAAERERRAEAEYAAGVLDLMTGREDMMDDEDHLF
MSMEG_2174|M.smegmatis_MC2_155 LDELVDLLGRNKAADEAAERERREEEAYAAGVLDLMVDREDLMDDEDHLL
TH_1237|M.thermoresistible__bu LDELIDLLGPDKPADDTAERERQKQAEYAAEVLESLVRREDLMDDEDRLL
****:**** :*..:::** **: : *** **: : ***:*:*** *:
Mflv_3796|M.gilvum_PYR-GCK AQDVIAAEDLAERFLERDTRELAERAAADRDWTYGHIVVDEAQELSEMDW
Mvan_2598|M.vanbaalenii_PYR-1 ARDVIGAEDLAERFLERDTREVAERAAADREWTYGHVVVDEAQELSEMDW
MAB_3189c|M.abscessus_ATCC_199 ATDLLGAEDLAERFTERDTRDLVERASADRDWTYGHIVIDEAQELSEMDW
MSMEG_2174|M.smegmatis_MC2_155 AQDLIDAEELADRFKEQDNRELSERAAADREWTYGHVVVDEAQELSEMDW
TH_1237|M.thermoresistible__bu PTDMLFGEDLAERFAERDHRDLAERAAADRDWVYGHIVVDEAQELSEMDW
. *:: .*:**:** *:* *:: ***:***:*.***:*:***********
Mflv_3796|M.gilvum_PYR-GCK RVLMRRCPSRSFTIVGDLAQRRSPAGTTSWDEMLKTYVPDRWVYRTLTVN
Mvan_2598|M.vanbaalenii_PYR-1 RVLMRRCPSRSFTMVGDLAQRRSPAGAASWAAVLEPYVPDRWMYRTLTVN
MAB_3189c|M.abscessus_ATCC_199 RVLMRRCPSRSFTVVGDLAQRRSAAGATSWEAMLQPYVPGRWLYRPLSVN
MSMEG_2174|M.smegmatis_MC2_155 RLLMRRCPRRSFTIVGDLAQRRSPAGARSWGAMLDSYVPGRWVYKSLSVN
TH_1237|M.thermoresistible__bu RALMRRCPSRSFTVVGDLSQRRSAAGTTSWDSMFERYVPGRWVYRTLTVN
* ****** ****:****:****.**: ** ::. ***.**:*:.*:**
Mflv_3796|M.gilvum_PYR-GCK YRTPAEIMIVAAAVLADFSPDVVPPESVRSTGVAPWARQVSDAELPSAIA
Mvan_2598|M.vanbaalenii_PYR-1 YRTPAEIMAVAADVLAEFAPGARPPESVRSTGVVPWARKVSDDELPSAIE
MAB_3189c|M.abscessus_ATCC_199 YRTPAEIMAVASAVLAEFAPGTQPPESVRSSGVLPWSRRLSEGELPKAIE
MSMEG_2174|M.smegmatis_MC2_155 YRTPAEIMAVAAAVLAEFAPDATPPDSVRACGVAPWARQVTDDDIASAIA
TH_1237|M.thermoresistible__bu YRTPAEIMAVAAALLAEFAPGVAPPESVRASGVPPWSRRVTADELPAAVE
******** **: :**:*:*.. **:***: ** **:*::: ::. *:
Mflv_3796|M.gilvum_PYR-GCK DFVRDEDNRDGTHVVIGPSDIPGAVLPTETKGLEFDAVLVVHPERILAEG
Mvan_2598|M.vanbaalenii_PYR-1 NFIREEADREGTHVVIGPADVPGAVIPTETKGLEFDAVLVVHPERILAEG
MAB_3189c|M.abscessus_ATCC_199 EFVLNEKGREGTSVVIGPPGVPGTVPASETKGLEFDAVLVVEPERILADG
MSMEG_2174|M.smegmatis_MC2_155 EFVSEEAGREGTSVVIGPPDVPGTVPPSETKGLEFDAVLVVEPERILADG
TH_1237|M.thermoresistible__bu EFVRAEADRPGTSVVIGPPDVPGAVAPSQTKGLEFDAVLVVEPERILADG
:*: * .* ** *****..:**:* .::************.******:*
Mflv_3796|M.gilvum_PYR-GCK SRGAADLYVALTRATQRLGVLHRDPLPPALAGLGQ---------------
Mvan_2598|M.vanbaalenii_PYR-1 SRGAADLYVALTRATQRLGVLHRDPLPQALTGLNHH--------------
MAB_3189c|M.abscessus_ATCC_199 PRGAAELYVALTRATQRLGVLHVAPLPQPLIGLTESTTGPGPDHRVMPTG
MSMEG_2174|M.smegmatis_MC2_155 PRGAAELYVALTRATQRLGVLYRDALPQALAGLAEGDAAATVEQRTSA--
TH_1237|M.thermoresistible__bu PRGAAELYVALTRATQRLGVLHIDPLPSALSGLTPLEDPAGTPAPA----
.****:***************: .** .* **
Mflv_3796|M.gilvum_PYR-GCK ---
Mvan_2598|M.vanbaalenii_PYR-1 ---
MAB_3189c|M.abscessus_ATCC_199 VAQ
MSMEG_2174|M.smegmatis_MC2_155 ---
TH_1237|M.thermoresistible__bu ---