For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSYESGDFDRVVRFDNRLLGSVSHAPHIDTGSTPTGAAGRPQLSLVPDSFDVAPEAEEDQWQERALCAQT DPEAFFPEKGGSTREAKRICQGCEVRDACLEYALAHDERFGIWGGLSERERRRLKRGII
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_1831 | - | - | 100% (129) | transcription factor WhiB |
| M. smegmatis MC2 155 | MSMEG_1919 | - | 4e-12 | 42.25% (71) | transcription factor WhiB |
| M. smegmatis MC2 155 | MSMEG_1597 | - | 2e-11 | 44.58% (83) | transcription factor WhiB |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3288c | whiB2 | 6e-37 | 90.79% (76) | transcriptional regulatory protein WHIB-like WHIB2 |
| M. gilvum PYR-GCK | Mflv_4729 | - | 4e-55 | 77.44% (133) | transcription factor WhiB |
| M. tuberculosis H37Rv | Rv3260c | whiB2 | 7e-37 | 90.79% (76) | transcriptional regulatory protein WHIB-like WHIB2 |
| M. leprae Br4923 | MLBr_00760 | whiB2 | 2e-37 | 84.15% (82) | putative transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_3606c | - | 3e-42 | 79.80% (99) | WhiB family transcriptional regulator |
| M. marinum M | MMAR_1282 | whiB2 | 2e-40 | 68.03% (122) | transcriptional regulatory protein Whib-like WhiB2 |
| M. avium 104 | MAV_4223 | - | 1e-38 | 71.82% (110) | transcription factor WhiB |
| M. thermoresistible (build 8) | TH_0775 | whiB2 | 2e-38 | 86.75% (83) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB2 |
| M. ulcerans Agy99 | MUL_2605 | whiB2 | 2e-40 | 68.03% (122) | transcriptional regulatory protein Whib-like WhiB2 |
| M. vanbaalenii PYR-1 | Mvan_1734 | - | 1e-55 | 76.69% (133) | transcription factor WhiB |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4729|M.gilvum_PYR-GCK MAFEQADFGDSIRFDSRLLGSVGSAPHIQTGPAPSGTN--GRPQLSLVPE
Mvan_1734|M.vanbaalenii_PYR-1 MAFEQADFGDSIRFDSRLLGSVGSAPHIQTGPAPSGAG--GRPQLSLVPD
MSMEG_1831|M.smegmatis_MC2_155 MSYESGDFDRVVRFDNRLLGSVSHAPHIDTGSTPTGAA--GRPQLSLVPD
MMAR_1282|M.marinum_M MPYEH------------LRGVMGGTPHTTAGSVTVSPMEIARPHLSLVPD
MUL_2605|M.ulcerans_Agy99 MPYEH------------LWGVMGGTPHTTAGSVTVSPMEIARPHLSLVPD
MLBr_00760|M.leprae_Br4923 ----------------------------------------------MVPK
MAV_4223|M.avium_104 ---------------------MAGTPHTPIDSAPARP---VRPHLTVVPD
Mb3288c|M.bovis_AF2122/97 ----------------------------------------------MVPE
Rv3260c|M.tuberculosis_H37Rv ----------------------------------------------MVPE
TH_0775|M.thermoresistible__bu --------------------------------------------MDVAPA
MAB_3606c|M.abscessus_ATCC_199 MLFGRNEFG--------VHDELSSG--VGTGAAGLSP---ARPHLTLVQN
:.
Mflv_4729|M.gilvum_PYR-GCK RIDSFGDDSGVL----DEDQWQERALCAQTDPEAFFPEKGGSTREAKRIC
Mvan_1734|M.vanbaalenii_PYR-1 HIEQFGDDSGIP----DEDQWQERALCAQTDPEAFFPEKGGSTREAKRIC
MSMEG_1831|M.smegmatis_MC2_155 SFDVAPEAE--------EDQWQERALCAQTDPEAFFPEKGGSTREAKRIC
MMAR_1282|M.marinum_M ASAAFEPEPLPEPVDPPADQWQDRALCAQTDPEAFFPEKGGSTREAKKIC
MUL_2605|M.ulcerans_Agy99 ASAAFEPEPLPEPVDPPADQWQDRALCAQTDPEAFFPEKGGSTREAKKIC
MLBr_00760|M.leprae_Br4923 ALVAFEVESEPE----SSDQWQDRALCAQTDPEAFFPEKGGSTREAKKIC
MAV_4223|M.avium_104 APVAFEPEPLPAP---VADQWQDRALCAQTDPEAFFPEKGGSTREAKKIC
Mb3288c|M.bovis_AF2122/97 APAPFE-EPLPP---EATDQWQDRALCAQTDPEAFFPEKGGSTREAKKIC
Rv3260c|M.tuberculosis_H37Rv APAPFE-EPLPP---EATDQWQDRALCAQTDPEAFFPEKGGSTREAKKIC
TH_0775|M.thermoresistible__bu TIDKPA-----------DEQWQERALCAQTDPEAFFPEKGGSTREAKRIC
MAB_3606c|M.abscessus_ATCC_199 DFDALAAVA--------DDQWQEKALCAQTDPEAFFPEKGGSTREAKRIC
:***::***********************:**
Mflv_4729|M.gilvum_PYR-GCK LGCEVKDACLEYALANDERFGIWGGLSERERRRLKRGII
Mvan_1734|M.vanbaalenii_PYR-1 LGCEVKDACLEYALANDERFGIWGGLSERERRRLKRGII
MSMEG_1831|M.smegmatis_MC2_155 QGCEVRDACLEYALAHDERFGIWGGLSERERRRLKRGII
MMAR_1282|M.marinum_M LGCEVRHECLEYALAHDERFGIWGGLSERERRRLKRGII
MUL_2605|M.ulcerans_Agy99 LGCEVRHECLEYALAHDERFGIWGGLSERERRRLKRGII
MLBr_00760|M.leprae_Br4923 LGCEVRHECLEYALAHDERFGIWGGLSERERRRLKRGVI
MAV_4223|M.avium_104 LGCEVRHECLEYALEHDERFGIWGGLSERERRRLKRGII
Mb3288c|M.bovis_AF2122/97 MGCEVRHECLEYALAHDERFGIWGGLSERERRRLKRGII
Rv3260c|M.tuberculosis_H37Rv MGCEVRHECLEYALAHDERFGIWGGLSERERRRLKRGII
TH_0775|M.thermoresistible__bu MGCEVRDECLEYALAHDERFGIWGGLSERERRRLKRGII
MAB_3606c|M.abscessus_ATCC_199 QGCEVKDECLEYALANDERFGIWGGLSERERRRLKRGII
****:. ****** :*********************:*