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M. smegmatis MC2 155 MSMEG_1716 (-)

annotation: IS3 family protein element, transposase orfA
coordinates: 1812681 - 1812956
length: 91

VRMVRTLREELGTEQGTVARVARQLGYGVESVRSWVRQADIDDGHAPGVTTAESAKVKELEQEIRELKRA
NEILKRAASFFGAELDRQHKK
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_1716--100% (91)IS3 family protein element, transposase orfA
M. smegmatis MC2 155MSMEG_2676-2e-1753.41% (88) IS1137, transposase orfA
M. smegmatis MC2 155MSMEG_1720-2e-1753.41% (88) IS1137, transposase orfA

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2839c-5e-2053.41% (88) transposase
M. gilvum PYR-GCKMflv_0600-6e-4595.60% (91) Fis family transcriptional regulator
M. tuberculosis H37RvRv3474-5e-2053.41% (88) transposase IS6110
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_2087-2e-1039.06% (64) transposase
M. marinum MMMAR_2547-1e-1947.83% (92) transposase, ISMyma03_aa1
M. avium 104MAV_3272-4e-4291.21% (91) ISAfe7, transposase OrfA
M. thermoresistible (build 8)TH_1992-1e-1848.91% (92) POSSIBLE TRANSPOSASE FOR INSERTION ELEMENT IS6110
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_5972-2e-3782.42% (91) transposase IS3/IS911 family protein

CLUSTAL 2.0.9 multiple sequence alignment


Mb2839c|M.bovis_AF2122/97           -----------------------------------------MSGGSSRRY
Rv3474|M.tuberculosis_H37Rv         -----------------------------------------MSGGSSRRY
MMAR_2547|M.marinum_M               -----------------------------------------MARAS--KY
TH_1992|M.thermoresistible__bu      VLAKLIWQQHWGTWLKFGRADKLFTRLRAARLDHTVEAEIRRLAAVDXKY
MSMEG_1716|M.smegmatis_MC2_155      --------------------------------------------------
Mflv_0600|M.gilvum_PYR-GCK          -----------------------------------MPKEQSPGKPTTRRY
MAV_3272|M.avium_104                -----------------------------------MPKEQSPGKPTTRRY
Mvan_5972|M.vanbaalenii_PYR-1       -----------------------------------MPKEQSVGKPTTRRY
MAB_2087|M.abscessus_ATCC_1997      ----------------------------MTSELACPKRAGWKDVSVPRPY
                                                                                      

Mb2839c|M.bovis_AF2122/97           PPELRERAVRMVAEIRGQHD-SEWAAISEVARLLGVGCAETVRKWVRQAQ
Rv3474|M.tuberculosis_H37Rv         PPELRERAVRMVAEIRGQHD-SEWAAISEVARLLGVGCAETVRKWVRQAQ
MMAR_2547|M.marinum_M               PEELRERAVRMVAEIAPQYG-SQWAAICAVAGKLGVGTPETVRTWVRRAE
TH_1992|M.thermoresistible__bu      SPEFRDRALRLLDTTMEDSGVSEFEAIKSVASKLGV-SQESVRRWRRKAE
MSMEG_1716|M.smegmatis_MC2_155      --------MRMVRTLREELG-TEQGTVARVARQLGY-GVESVRSWVRQAD
Mflv_0600|M.gilvum_PYR-GCK          SSEEKAAAVRMVRTLREELG-TEQGTVTRVAHQLGY-GVESVRSWVRQAD
MAV_3272|M.avium_104                SAEEKAAAVRMVRTLRAELG-TEQGTVQRVARQLGY-GVESVRTWVRQVD
Mvan_5972|M.vanbaalenii_PYR-1       SAEEKAAAVRMVRALRAELG-IAQGTVQRVATQLGY-GVESVRTWVRQAD
MAB_2087|M.abscessus_ATCC_1997      PREFRDDVVRVARNRDDGVT------IEQIATDFGV-HPMTLTKWMRQAD
                                            :*:               :  :*  :*     ::  * *:.:

Mb2839c|M.bovis_AF2122/97           VDAGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFA-AELDRPA
Rv3474|M.tuberculosis_H37Rv         VDAGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFA-AELDRPA
MMAR_2547|M.marinum_M               VDAGQRPGVSSEQSEELRRLKRENAELRRANEILKAAAIFFG-AELDRPA
TH_1992|M.thermoresistible__bu      IDAGQRPGVTSTEHAEIRKLKRENAELRRANEILKSASAFFA-AELDRPA
MSMEG_1716|M.smegmatis_MC2_155      IDDGHAPGVTTAESAKVKELEQEIRELKRANEILKRAASFFG-AELDRQH
Mflv_0600|M.gilvum_PYR-GCK          IDDGHAPGVTSTESAKVKELEQEIRELKRANEILKRAASFFG-AELDRQH
MAV_3272|M.avium_104                IDEGLAPGVTTSESKKVKELEQEIRELKRANEILKRAASFFG-AELDRQH
Mvan_5972|M.vanbaalenii_PYR-1       IDEGVAPGVTTAESTRLKALEQENRELERANEILKRAASFFG-AELDRQH
MAB_2087|M.abscessus_ATCC_1997      VDEGAKPGKSTNDSADLRELRRRNRLLEQENEVLRRAAAYLSQANLPGKG
                                    :* *  ** :: :   :: *.:    *.: * :*: *: ::. *:*    

Mb2839c|M.bovis_AF2122/97           R---
Rv3474|M.tuberculosis_H37Rv         R---
MMAR_2547|M.marinum_M               RR--
TH_1992|M.thermoresistible__bu      TK--
MSMEG_1716|M.smegmatis_MC2_155      KK--
Mflv_0600|M.gilvum_PYR-GCK          KK--
MAV_3272|M.avium_104                KK--
Mvan_5972|M.vanbaalenii_PYR-1       KR--
MAB_2087|M.abscessus_ATCC_1997      STRS