For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VNWNALRSKAIEVSRHAYAPYSGFPVGAAALVDDGRTVTGCNVENVSYGLGLCAECAVVCALHSGGGGRL VALSCVGPDGGVLMPCGRCRQVLLEHGGPELLIDHAHGPRPLRELLPDAFGPDDLGRR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_1673 | cdd | - | 100% (128) | cytidine deaminase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3344c | cdd | 9e-52 | 75.59% (127) | cytidine deaminase |
| M. gilvum PYR-GCK | Mflv_4843 | - | 2e-60 | 82.81% (128) | cytidine deaminase |
| M. tuberculosis H37Rv | Rv3315c | cdd | 9e-52 | 75.59% (127) | cytidine deaminase |
| M. leprae Br4923 | MLBr_02174 | cdd | 4e-40 | 57.26% (124) | cytidine deaminase |
| M. abscessus ATCC 19977 | MAB_3672c | - | 1e-56 | 77.17% (127) | cytidine deaminase Cdd |
| M. marinum M | MMAR_1204 | cdd | 4e-50 | 71.43% (126) | cytidine deaminase Cdd |
| M. avium 104 | MAV_4296 | cdd | 6e-55 | 78.40% (125) | cytidine deaminase |
| M. thermoresistible (build 8) | TH_3060 | - | 1e-20 | 82.69% (52) | PUTATIVE cytidine deaminase |
| M. ulcerans Agy99 | MUL_1366 | cdd | 2e-50 | 71.43% (126) | cytidine deaminase |
| M. vanbaalenii PYR-1 | Mvan_1590 | - | 6e-59 | 81.89% (127) | cytidine deaminase |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4843|M.gilvum_PYR-GCK MTGEIDWNLLRRKAIDVSQHAYAPYSGFRVGAAALVDDRRMVAGCNVENV
Mvan_1590|M.vanbaalenii_PYR-1 MTTEIDWKMLRRKAIDASVHAYAPYSRFRVGAAALVDDHRMVAGCNVENV
TH_3060|M.thermoresistible__bu --------------------------------------------------
MSMEG_1673|M.smegmatis_MC2_155 ----MNWNALRSKAIEVSRHAYAPYSGFPVGAAALVDDGRTVTGCNVENV
MAB_3672c|M.abscessus_ATCC_199 --MKIEWNELRDKAYAVTKHAYAPYSKYPVGAAALVDDGRVISGCNVENV
Mb3344c|M.bovis_AF2122/97 -MPDVDWNMLRGNATQAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVENV
Rv3315c|M.tuberculosis_H37Rv -MPDVDWNMLRGNATQAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVENV
MMAR_1204|M.marinum_M -MPDIDWKQLRDKATQVAAGAYAPYSRFPVGAAALVDDGRVVTGCNVENV
MUL_1366|M.ulcerans_Agy99 -MPDIDWKQLRDKATQVAAGAYAPYSRFPVGAAALVDDGRVVTGCNVENV
MAV_4296|M.avium_104 -MPDIDWNALRDKAIDASAGAYAPYSRFRVGAAGLVDDGRVVTGCNVENI
MLBr_02174|M.leprae_Br4923 -MGDVNWDTLQKAAVAARANSYAPYSNFPVGVAGFVNDGRLITGVNVENA
Mflv_4843|M.gilvum_PYR-GCK SYGLGLCAECAVVCALHSSGGGRLVALTCVGPDGEVLMPCGRCRQVLFEH
Mvan_1590|M.vanbaalenii_PYR-1 SYGLGLCAECAVVCALHSSGGGRLLALSCVGPDGEVLMPCGRCRQLLLEH
TH_3060|M.thermoresistible__bu -----------------------------VGPDGEVLMPCGRCRQVLLEH
MSMEG_1673|M.smegmatis_MC2_155 SYGLGLCAECAVVCALHSGGGGRLVALSCVGPDGGVLMPCGRCRQVLLEH
MAB_3672c|M.abscessus_ATCC_199 SYGLGLCAECSVVCALFSSGGGRLMALSCVDSRGEPLMPCGRCRQLLLEH
Mb3344c|M.bovis_AF2122/97 SYGLTLCAECAVVCALHSTGGGRLLALACVDGHGSVLMPCGRCRQVLLEH
Rv3315c|M.tuberculosis_H37Rv SYGLTLCAECAVVCALHSTGGGRLLALACVDGHGSVLMPCGRCRQVLLEH
MMAR_1204|M.marinum_M SYGLALCAECGVVCALHATGGGRLVALACVDGRGAPLMPCGRCRQLLFEH
MUL_1366|M.ulcerans_Agy99 SYGLALCAECGVVCALHATGGGRLVALACVDGRGAPLMPCGRCRQLLFEH
MAV_4296|M.avium_104 SYGLGLCAECAVVCALYASGGGRLVALACVDGRGSVLTPCGRCRQVLAEH
MLBr_02174|M.leprae_Br4923 SYGLALCAECSMISALYATGGGRLVAVYCVDGNGDSLMPCGRCRQLLYEH
*. * * *******:* **
Mflv_4843|M.gilvum_PYR-GCK GGGDLLIDHPLGPKPLGELLPDAFGPADLDRRPYPVEETP
Mvan_1590|M.vanbaalenii_PYR-1 GGPEMLIDHPLGPRPLGELLPDAFGPADLARNRLPTEETP
TH_3060|M.thermoresistible__bu GGPDLLIAHPAGPRRLAELLPDAFGPADLDRG---TREIS
MSMEG_1673|M.smegmatis_MC2_155 GGPELLIDHAHGPRPLRELLPDAFGPDDLGRR--------
MAB_3672c|M.abscessus_ATCC_199 GGPDLLIDHADGPRRLAQLLPDAFGPDDLDRGRI------
Mb3344c|M.bovis_AF2122/97 GGSELLIDHPVRPRRLGDLLPDAFGLDDLPRERR------
Rv3315c|M.tuberculosis_H37Rv GGSELLIDHPVRPRRLGDLLPDAFGLDDLPRERR------
MMAR_1204|M.marinum_M GGPELLVDHLAGPRRLGDLLPEPF-HADLTGEPT------
MUL_1366|M.ulcerans_Agy99 GGPELLVDHLAGPRRLGDLLPEPF-HADRTGEPT------
MAV_4296|M.avium_104 GGPELLIDHPGGPRRLGELLPDAFGPDQLAAGRD------
MLBr_02174|M.leprae_Br4923 GGPELKIMTPKGVQTMAQLLPQAFNPQERIFGNDE-----
** :: : : : :***:.* :