For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_1472 (rpsE)

annotation: 30S ribosomal protein S5
coordinates: 1564865 - 1565509
length: 214

MAEQAGAGSAQDNRGGRGRRDDRGGRGRDGGDKSNYIERVVSINRVSKVVKGGRRFSFTALVIVGDGKGM
VGVGYGKAKEVPAAIAKGVEEARKNFFRVPLIGSTITHPVQGEAAAGVVMLRPASPGTGVIAGGAARAVL
ECAGVHDILAKSLGSDNAINVVHATVAALKLLQRPEEVAARRGLPIEDVAPAGMLKARRESEALAAAAAR
EGSA
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_1472rpsE-100% (214)30S ribosomal protein S5

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0742rpsE5e-9687.38% (214) 30S ribosomal protein S5
M. gilvum PYR-GCKMflv_5030rpsE1e-10789.64% (222) 30S ribosomal protein S5
M. tuberculosis H37RvRv0721rpsE5e-9687.38% (214) 30S ribosomal protein S5
M. leprae Br4923MLBr_01842rpsE1e-8285.56% (187) 30S ribosomal protein S5
M. abscessus ATCC 19977MAB_3795crpsE5e-9385.24% (210) 30S ribosomal protein S5
M. marinum MMMAR_1052rpsE2e-9986.70% (218) 30S ribosomal protein S5, RpsE
M. avium 104MAV_4448rpsE7e-9987.05% (224) 30S ribosomal protein S5
M. thermoresistible (build 8)TH_0306rpsE5e-9887.85% (214) PROBABLE 30S RIBOSOMAL PROTEIN S5 RPSE
M. ulcerans Agy99MUL_0811rpsE2e-9986.24% (218) 30S ribosomal protein S5
M. vanbaalenii PYR-1Mvan_1339rpsE1e-10387.05% (224) 30S ribosomal protein S5

CLUSTAL 2.0.9 multiple sequence alignment


Mb0742|M.bovis_AF2122/97            -MAEQPAG----QAGTTDNRDA-RGDRE--GRRRDSG--RGSRER--DGE
Rv0721|M.tuberculosis_H37Rv         -MAEQPAG----QAGTTDNRDA-RGDRE--GRRRDSG--RGSRER--DGE
MAV_4448|M.avium_104                MMAEQPAG----GQGAGDSRDS-RGDRDSRGRRGDGG--RGGRDR--DGD
MMAR_1052|M.marinum_M               -MAEQSAG----GQGAPEGRDS-RDSREGRGRR-DGG--RGGR----DSD
MUL_0811|M.ulcerans_Agy99           -MAEQSAG----GQGAPEGRDS-RDSREGRGRR-DGG--RGGR----DSD
Mflv_5030|M.gilvum_PYR-GCK          -MAEQAG-----AGSAQDNRGGGRDDRGGRGRRDDRG-GRGGRD---DRE
Mvan_1339|M.vanbaalenii_PYR-1       MMAEQAVGA---GGPSSDGRDGGRGDRGGRGRRDDRG-GRGGRD---DRE
MSMEG_1472|M.smegmatis_MC2_155      -MAEQAG-----AGSAQDNR-------GGRGRRDDRG-GRG-RD---GGD
MAB_3795c|M.abscessus_ATCC_199      MMAQRNSGAPDNAGGSNDGRE------GGRGRRDNRDDRRGGRD---NAE
TH_0306|M.thermoresistible__bu      -MSQPGAG----GPATSEGR---------REREGRRRDDRRGRD---GGD
MLBr_01842|M.leprae_Br4923          -MAAQSAG------LLGDSREG-------RSRREGGS--RGGRDRDRDGE
                                     *:              :.*           *.      *  *    . :

Mb0742|M.bovis_AF2122/97            KSNYLERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVP
Rv0721|M.tuberculosis_H37Rv         KSNYLERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVP
MAV_4448|M.avium_104                KSNYLERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVP
MMAR_1052|M.marinum_M               KSNYLERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVP
MUL_0811|M.ulcerans_Agy99           KSNYLERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVP
Mflv_5030|M.gilvum_PYR-GCK          KSNYLERVVTINRVSKVVKGGRRFSFTALVIVGDGKGMVGVGYGKAKEVP
Mvan_1339|M.vanbaalenii_PYR-1       KSQYLERVVTINRVSKVVKGGRRFSFTALVIVGDGKGMVGVGYGKAKEVP
MSMEG_1472|M.smegmatis_MC2_155      KSNYIERVVSINRVSKVVKGGRRFSFTALVIVGDGKGMVGVGYGKAKEVP
MAB_3795c|M.abscessus_ATCC_199      KSNYLERVVTINRVSKVVKGGRRFSFTALVIVGDGHGLVGVGYGKAKEVP
TH_0306|M.thermoresistible__bu      KSNYLERVVSINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVP
MLBr_01842|M.leprae_Br4923          KGNYLERVVAINRVSKVVKGGRRFSFTALVIVGDGHGMVGVGYGKAKEVP
                                    *.:*:****:*************************:*:************

Mb0742|M.bovis_AF2122/97            AAIAKGVEEARKSFFRVPLIGGTITHPVQGEAAAGVVLLRPASPGTGVIA
Rv0721|M.tuberculosis_H37Rv         AAIAKGVEEARKSFFRVPLIGGTITHPVQGEAAAGVVLLRPASPGTGVIA
MAV_4448|M.avium_104                AAIAKGVEEARKGFFRVPLIRGTITHPVQGEAAAGVVLLRPASPGTGVIA
MMAR_1052|M.marinum_M               AAIAKGVEEARKGFFRVPLIGGTITHPVQGEAAAGVVLLRPASPGTGVIA
MUL_0811|M.ulcerans_Agy99           AAIAKGVEEARKGFFRVPLIGGTITHPVQGEAAAGVVLLRPASPGTGVLA
Mflv_5030|M.gilvum_PYR-GCK          AAIAKGVEEARKNFFRVPLIGGTVTHPVQGEAAAGVVMLRPASPGTGVIA
Mvan_1339|M.vanbaalenii_PYR-1       AAIAKGVEEARKNFFRVPLIGGTVTHPVQGEAAAGVVMLRPASPGTGVIA
MSMEG_1472|M.smegmatis_MC2_155      AAIAKGVEEARKNFFRVPLIGSTITHPVQGEAAAGVVMLRPASPGTGVIA
MAB_3795c|M.abscessus_ATCC_199      AAIAKGVDEARKNFFRVPLIGGTITHPVQGEDSAGVVMLRPASAGTGVIA
TH_0306|M.thermoresistible__bu      AAIAKGVEEARKNFFRVPLIGGTITHPVQGEKAAGVVMLRPASAGTGVIA
MLBr_01842|M.leprae_Br4923          AAIAKGVEEARKSFFRVPLIDGTITHPVQGEAAAGVVLLRPASPGTGVIA
                                    *******:****.******* .*:******* :****:*****.****:*

Mb0742|M.bovis_AF2122/97            GGAARAVLECAGVHDILAKSLGSDNAINVVHATVAALKLLQRPEEVAARR
Rv0721|M.tuberculosis_H37Rv         GGAARAVLECAGVHDILAKSLGSDNAINVVHATVAALKLLQRPEEVAARR
MAV_4448|M.avium_104                GGAARAVLECAGVHDILAKSLGSDNAINVVHATVAALKLLQRPEEVAARR
MMAR_1052|M.marinum_M               GGAARAVLECAGVHDILAKSLGSDNAINVVHATVAALKMLQRPEEVAARR
MUL_0811|M.ulcerans_Agy99           GGAARAVLECAGVHDILAKSLGSDNAINVVHATVAALKMLQRPEEVAARR
Mflv_5030|M.gilvum_PYR-GCK          GGACRAVLECAGVHDVLAKSLGSDNAINVVHATVAALKLLQRPEEVAARR
Mvan_1339|M.vanbaalenii_PYR-1       GGACRAVLECAGVHDVLAKSLGSDNAINVVHATVAALKLLQRPEEVAARR
MSMEG_1472|M.smegmatis_MC2_155      GGAARAVLECAGVHDILAKSLGSDNAINVVHATVAALKLLQRPEEVAARR
MAB_3795c|M.abscessus_ATCC_199      GGAARAVLECAGVHDILAKSLGSDNAINVVHATVAALKQLQRPEEVAARR
TH_0306|M.thermoresistible__bu      GGAVRAVLECAGVRDILAKSLGSDNAINVVHATVAALKMLQRPEEVAARR
MLBr_01842|M.leprae_Br4923          GGAVRAVLECAGVHDILAKSLGSDNAINVVHATVAALKLLQRPDEVAARR
                                    *** *********:*:********************** ****:******

Mb0742|M.bovis_AF2122/97            GLP----IEDVAPAGMLKARRKSEALAASVLPDRTI-----
Rv0721|M.tuberculosis_H37Rv         GLP----IEDVAPAGMLKARRKSEALAASVLPDRTI-----
MAV_4448|M.avium_104                GLP----IEDVAPAGMLKARRESDALASAAAAREAAAQ---
MMAR_1052|M.marinum_M               GLP----IEDVAPAGMLKARRESEALAAAAVREAQTSGAQP
MUL_0811|M.ulcerans_Agy99           GLP----IEDVAPAGMLKARRESEALAAAAVREAQTSGAQP
Mflv_5030|M.gilvum_PYR-GCK          GLP----IEDVAPAGMLRARREAEALAVSAAREGTA-----
Mvan_1339|M.vanbaalenii_PYR-1       GLP----IEDVAPAGMLRARREAEALAASAAREGTA-----
MSMEG_1472|M.smegmatis_MC2_155      GLP----IEDVAPAGMLKARRESEALAAAAAREGSA-----
MAB_3795c|M.abscessus_ATCC_199      GLP----IEDVAPAGMLRARAEFAAAAAQGGSHG-------
TH_0306|M.thermoresistible__bu      GLP----IEDVAPARMLQARRESEALAASAAREGS------
MLBr_01842|M.leprae_Br4923          GLRSGMLPRSWDPAGVAGER--SVDRPVGRVREQA------
                                    **      ..  ** :   *      .