For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MCRRVVEAAAVAVTAVVTAAACSHTVTGTAQRAQSDPADPNRSYGYVDDRCGLLVDSTVQEILGADNVVR PYSGAVCQYVLSRKTQPEPGPDEGQESGAGPAMIDVVFSWFETGTLQREREVAEQREATITDTVIERQQA FLARRDVTGAACSATAAAGSGVLSWWVQFRGKQDGDPCKDAEKLLSRTLQSEL
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_1395 | - | - | 100% (193) | putative lipoprotein |
| M. smegmatis MC2 155 | MSMEG_5005 | - | 3e-14 | 28.35% (194) | LprC protein |
| M. smegmatis MC2 155 | MSMEG_5007 | - | 1e-06 | 25.26% (190) | LprB protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1306 | lprC | 1e-14 | 27.84% (194) | putative lipoprotein LPRC |
| M. gilvum PYR-GCK | Mflv_5081 | - | 1e-64 | 63.35% (191) | hypothetical protein Mflv_5081 |
| M. tuberculosis H37Rv | Rv1275 | lprC | 1e-14 | 27.84% (194) | lipoprotein LprC |
| M. leprae Br4923 | MLBr_01116 | - | 2e-14 | 27.84% (194) | lipoprotein |
| M. abscessus ATCC 19977 | MAB_3855c | - | 3e-20 | 27.86% (201) | putative lipoprotein LprC |
| M. marinum M | MMAR_4145 | lprC | 2e-13 | 27.23% (191) | lipoprotein LprC |
| M. avium 104 | MAV_1424 | - | 1e-12 | 28.72% (188) | LprC protein |
| M. thermoresistible (build 8) | TH_4113 | - | 1e-44 | 47.69% (195) | PUTATIVE putative conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_4008 | lprC | 2e-13 | 27.23% (191) | lipoprotein LprC |
| M. vanbaalenii PYR-1 | Mvan_1276 | - | 1e-63 | 62.43% (189) | hypothetical protein Mvan_1276 |
CLUSTAL 2.0.9 multiple sequence alignment
MLBr_01116|M.leprae_Br4923 -MRLSVRG-RRS---VFAGVAVLVSAALVVTGCSRSIGGTAVKAGSHDVP
MAV_1424|M.avium_104 MMAMMRPGPRRST--ARAAATVLFLALLVLTGCSRSIAGNAVKAGG-NVP
Mb1306|M.bovis_AF2122/97 ----MRR--------VLVGAAALITALLVLTGCTKSISGTAVKAGGAGVP
Rv1275|M.tuberculosis_H37Rv ----MRR--------VLVGAAALITALLVLTGCTKSISGTAVKAGGAGVP
MMAR_4145|M.marinum_M MSGGMRRGSRRGNDAGLRAAAVLLAVLVSITGCSRSISGNAIKAGGGGVP
MUL_4008|M.ulcerans_Agy99 MSGGMRRGSRRGNGAGLRAAAVLLAVLVSTTGCSRSISGNAIKAGGGGVP
Mflv_5081|M.gilvum_PYR-GCK ----MLQR----VGRVAFPFLVAVSATATATSCAHTVTGTPRSAQASVPD
Mvan_1276|M.vanbaalenii_PYR-1 ----MLRV----VSGVMPVLAVAVITTATAVGCAQTVTGTAQRSDAGVPD
MSMEG_1395|M.smegmatis_MC2_155 ----MCR-------RVVEAAAVAVTAVVTAAACSHTVTGTAQRAQSDPAD
TH_4113|M.thermoresistible__bu ----MHG--------RMAVAGAAIAMLIAVPACTRTVDGAAERIRFDAAG
MAB_3855c|M.abscessus_ATCC_199 ----MRK--------IFGTLAAVLLLLAAPTGCAHTVDGTAVAPGEGLSS
. . .*:::: * .
MLBr_01116|M.leprae_Br4923 RN---NNSQQQYPNLLKECEVLTTDILAKTVGADSLDIQSTFVGAICRWQ
MAV_1424|M.avium_104 RN---NNSQQQYPNLLKECEVLTSDILAKTVGADPLDIQSTFVGAICRWQ
Mb1306|M.bovis_AF2122/97 RN---NNSQERYPNLLKECEVLTTDILAKTVGADPLDIQSTFVGAICRWQ
Rv1275|M.tuberculosis_H37Rv RN---NNSQERYPNLLKECEVLTTDILAKTVGADPLDIQSTFVGAICRWQ
MMAR_4145|M.marinum_M RN---NNSEQQYPNLLKECEVLTTDILAKTVGADPLDIQSTFVGAICRWQ
MUL_4008|M.ulcerans_Agy99 RN---NNSEQQYPSLLKECEVLTTDILAKTVGADPLDIQSTFVGAICRWQ
Mflv_5081|M.gilvum_PYR-GCK -----PDRSYGY-VD-DRCGLLEDGTVQELLGAD--VVTRPYSGAVCQYV
Mvan_1276|M.vanbaalenii_PYR-1 -----PDRSYGY-VD-NRCGLLDDSTVQAMLGAD--QITRPYSGAVCQYI
MSMEG_1395|M.smegmatis_MC2_155 -----PNRSYGY-VD-DRCGLLVDSTVQEILGAD--NVVRPYSGAVCQYV
TH_4113|M.thermoresistible__bu GDG--PGAGLGYDVDGDRCGLLADSTIADLLAAE--HVTKAYHGPVCQYV
MAB_3855c|M.abscessus_ATCC_199 NERGENDKLDPYGFANGQCGPLDEKTIVETVKAA--QIYQNFFGALCYWV
. * .* * : : * : : *.:* :
MLBr_01116|M.leprae_Br4923 AAN----------------PASLIDITRFWFEQGSLANERKVADFLKYKV
MAV_1424|M.avium_104 AAN----------------PAGLIDITRFWFEQGSLSNERKVAEFLKYKI
Mb1306|M.bovis_AF2122/97 AAN----------------PAGLIDITRFWFEQGSLSNERKVAEGLKYQV
Rv1275|M.tuberculosis_H37Rv AAN----------------PAGLIDITRFWFEQGSLSNERKVAEGLKYQV
MMAR_4145|M.marinum_M AAN----------------PAGLIDITRYWFEQGSLSNERKVAEGLKYQV
MUL_4008|M.ulcerans_Agy99 AAN----------------PAGLIDITRYWFEQGSLSNERKVAEGLKYQV
Mflv_5081|M.gilvum_PYR-GCK LAL------------ESAPDATTIDVVYSWFDAGTLQRERDLATARGAVV
Mvan_1276|M.vanbaalenii_PYR-1 LAR------------RSG-GAPTVDVTFSWFDTGSLQRERDLATARGASV
MSMEG_1395|M.smegmatis_MC2_155 LSRKTQPEPGPDEGQESGAGPAMIDVVFSWFETGTLQREREVAEQREATI
TH_4113|M.thermoresistible__bu LIR----------------ADAPLDVTYSWFASGSLQRERRLAEERGAEI
MAB_3855c|M.abscessus_ATCC_199 AAD---------------DAGNLIDLLYAYYEGGDVERDRTSADGMGQKT
:*: :: * : .:* *
MLBr_01116|M.leprae_Br4923 ENRSIAGVDSIVMRPDDPNGACGVASDAAG------VVGWWINPQA--SG
MAV_1424|M.avium_104 ETRNIAGIDSIVMRPDDPNGACGVASDAAG------VVGWWVNPQA--PG
Mb1306|M.bovis_AF2122/97 ETRAIQGVDSIVMRTGDPNGACGVASDAAG------VVGWWVNPQA--PG
Rv1275|M.tuberculosis_H37Rv ETRAIQGVDSIVMRTGDPNGACGVASDAAG------VVGWWVNPQA--PG
MMAR_4145|M.marinum_M ESRTIQGVDSIVMRPNDPNGACGVASDAAG------VVGWWVNPQA--PG
MUL_4008|M.ulcerans_Agy99 ESRTIQGVDSIVMRPNDPNGACGVASDAAG------VVGWWVNPQA--PG
Mflv_5081|M.gilvum_PYR-GCK EDTVIERHQAFLARRDTTGAACSATAAAGS-----GVLAWWVQYRGRESA
Mvan_1276|M.vanbaalenii_PYR-1 TDIVVERHAAFSARRDTTGAACSATAAAGS-----GVLSWWVQYRG-QAA
MSMEG_1395|M.smegmatis_MC2_155 TDTVIERQQAFLARRDVTGAACSATAAAGS-----GVLSWWVQFRG-KQD
TH_4113|M.thermoresistible__bu RDTTLHRHPGFFARRDVTGTACAATAGLGTDDSGRGVLSWWVQHRG-RSD
MAB_3855c|M.abscessus_ATCC_199 ADITINSRKGFTS--SGPGSGCGVTVPAGTG-----SLTWWVQYRK---G
: .: . .. .*..: . : **:: :
MLBr_01116|M.leprae_Br4923 IDACGQAIKLMELTLATNS
MAV_1424|M.avium_104 IDACGQAIKLMELTLATNS
Mb1306|M.bovis_AF2122/97 IDACGQAIKLMELTLATNA
Rv1275|M.tuberculosis_H37Rv IDACGQAIKLMELTLATNA
MMAR_4145|M.marinum_M IDACSQAIKLMELTLATNS
MUL_4008|M.ulcerans_Agy99 IDACLQAIKLMELTLATNS
Mflv_5081|M.gilvum_PYR-GCK GDPCAEAEKLLSATLRSDM
Mvan_1276|M.vanbaalenii_PYR-1 GDPCVDAEKLLSATLRSDM
MSMEG_1395|M.smegmatis_MC2_155 GDPCKDAEKLLSRTLQSEL
TH_4113|M.thermoresistible__bu GDPCADAERLLAATLSAAM
MAB_3855c|M.abscessus_ATCC_199 GDSCAAARQLVEHIVQTVL
*.* * :*: : :